-
1
-
-
0033150672
-
Topological characteristics of helical repeat proteins
-
Groves, M.R. & Barford, D. Topological characteristics of helical repeat proteins. Curr. Opin. Struct. Biol. 9, 383-389 (1999).
-
(1999)
Curr. Opin. Struct. Biol.
, vol.9
, pp. 383-389
-
-
Groves, M.R.1
Barford, D.2
-
2
-
-
0035783061
-
Protein repeats: Structures, functions, and evolution
-
Andrade, M.A., Perez-Iratxeta, C. & Ponting, C.P. Protein repeats: structures, functions, and evolution. J. Struct. Biol. 134, 117-131 (2001).
-
(2001)
J. Struct. Biol.
, vol.134
, pp. 117-131
-
-
Andrade, M.A.1
Perez-Iratxeta, C.2
Ponting, C.P.3
-
3
-
-
0034306119
-
When protein folding is simplified to protein coiling: The continuum of solenoid protein structures
-
Kobe, B. & Kajava, A.V. When protein folding is simplified to protein coiling: the continuum of solenoid protein structures. Trends Biochem. Sci. 25, 509-515 (2000).
-
(2000)
Trends Biochem. Sci.
, vol.25
, pp. 509-515
-
-
Kobe, B.1
Kajava, A.V.2
-
4
-
-
0033569354
-
A census of protein repeats
-
Marcotte, E.M., Pellegrini, M., Yeates, T.O. & Eisenberg, D. A census of protein repeats. J. Mol. Biol. 293, 151-160 (1999).
-
(1999)
J. Mol. Biol.
, vol.293
, pp. 151-160
-
-
Marcotte, E.M.1
Pellegrini, M.2
Yeates, T.O.3
Eisenberg, D.4
-
5
-
-
0033946441
-
Structure, function and evolution of plant disease resistance genes
-
Ellis, J., Dodds, P. & Pryor, T. Structure, function and evolution of plant disease resistance genes. Curr. Opin. Plant Biol. 3, 278-284 (2000).
-
(2000)
Curr. Opin. Plant Biol.
, vol.3
, pp. 278-284
-
-
Ellis, J.1
Dodds, P.2
Pryor, T.3
-
6
-
-
0027333330
-
Hundreds of ankyrin-like repeats in functionally diverse proteins: Mobile modules that cross phyla horizontally?
-
Bork, P. Hundreds of ankyrin-like repeats in functionally diverse proteins: mobile modules that cross phyla horizontally? Proteins: Struct. Funct. Genet. 17, 363-374 (1993).
-
(1993)
Proteins: Struct. Funct. Genet.
, vol.17
, pp. 363-374
-
-
Bork, P.1
-
7
-
-
0032792551
-
The ankyrin repeat: A diversity of interactions on a common structural framework
-
Sedgwick, S.G. & Smerdon, S.J. The ankyrin repeat: a diversity of interactions on a common structural framework. Trends Biochem. Sci. 24, 311-316 (1999).
-
(1999)
Trends Biochem. Sci.
, vol.24
, pp. 311-316
-
-
Sedgwick, S.G.1
Smerdon, S.J.2
-
8
-
-
0032491444
-
Functional interactions of transcription factor human GA-binding protein subunits
-
Suzuki, F. et al. Functional interactions of transcription factor human GA-binding protein subunits. J. Biol. Chem. 273, 29302-29308 (1998).
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 29302-29308
-
-
Suzuki, F.1
-
9
-
-
0032566439
-
IκBα functions through direct contacts with the nuclear localization signals and the DNA binding sequences of NF-κB
-
Malek, S., Huxford, T. & Ghosh, G. IκBα functions through direct contacts with the nuclear localization signals and the DNA binding sequences of NF-κB. J. Biol. Chem. 273, 25427-25435 (1998).
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 25427-25435
-
-
Malek, S.1
Huxford, T.2
Ghosh, G.3
-
10
-
-
0025978976
-
Man-made antibodies
-
Winter, G. & Milstein, C. Man-made antibodies. Nature 349, 293-299 (1991).
-
(1991)
Nature
, vol.349
, pp. 293-299
-
-
Winter, G.1
Milstein, C.2
-
11
-
-
0003046374
-
-
(eds. McCafferty, J., Hoogenboom, H.J. & Chiswell, D.J.) (IRL Press, Oxford)
-
Plückthun, A. et al. in Antibody Engineering (eds. McCafferty, J., Hoogenboom, H.J. & Chiswell, D.J.) 203-252 (IRL Press, Oxford, 1996).
-
(1996)
Antibody Engineering
, pp. 203-252
-
-
Plückthun, A.1
-
12
-
-
0030822252
-
Scaffolds for engineering novel binding sites in proteins
-
Nygren, P.-Å. & Uhlén, M. Scaffolds for engineering novel binding sites in proteins. Curr. Opin. Struct. Biol. 7, 463-469 (1997).
-
(1997)
Curr. Opin. Struct. Biol.
, vol.7
, pp. 463-469
-
-
Nygren, P.-Å.1
Uhlén, M.2
-
13
-
-
0033865190
-
Engineered protein scaffolds for molecular recognition
-
Skerra, A. Engineered protein scaffolds for molecular recognition. J. Mol. Recognit. 13, 167-187 (2000).
-
(2000)
J. Mol. Recognit.
, vol.13
, pp. 167-187
-
-
Skerra, A.1
-
14
-
-
0344033650
-
Imitating the humoral immune response
-
Skerra, A. Imitating the humoral immune response. Curr. Opin. Chem. Biol. 7, 683-693 (2003).
-
(2003)
Curr. Opin. Chem. Biol.
, vol.7
, pp. 683-693
-
-
Skerra, A.1
-
15
-
-
0037468685
-
A novel strategy to design binding molecules harnessing the modular nature of repeat proteins
-
Forrer, P., Stumpp, M.T., Binz, H.K. & Plückthun, A. A novel strategy to design binding molecules harnessing the modular nature of repeat proteins. FEBS Lett. 539, 2-6 (2003).
-
(2003)
FEBS Lett.
, vol.539
, pp. 2-6
-
-
Forrer, P.1
Stumpp, M.T.2
Binz, H.K.3
Plückthun, A.4
-
16
-
-
0042780350
-
Designing repeat proteins: Well-expressed, soluble and stable proteins from combinatorial libraries of consensus ankyrin repeat proteins
-
Binz, H.K., Stumpp, M.T., Forrer, P., Amstutz, P. & Plückthun, A. Designing repeat proteins: well-expressed, soluble and stable proteins from combinatorial libraries of consensus ankyrin repeat proteins. J. Mol. Biol. 332, 489-503 (2003).
-
(2003)
J. Mol. Biol.
, vol.332
, pp. 489-503
-
-
Binz, H.K.1
Stumpp, M.T.2
Forrer, P.3
Amstutz, P.4
Plückthun, A.5
-
17
-
-
0037452697
-
Designed to be stable: Crystal structure of a consensus ankyrin repeat protein
-
Kohl, A. et al. Designed to be stable: crystal structure of a consensus ankyrin repeat protein. Proc. Natl. Acad. Sci. USA 100, 1700-1705 (2003).
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 1700-1705
-
-
Kohl, A.1
-
18
-
-
18744380008
-
Consensus-derived structural determinants of the ankyrin repeat motif
-
Mosavi, L.K., Minor, D.L. Jr. & Peng, Z.-y. Consensus-derived structural determinants of the ankyrin repeat motif. Proc. Natl. Acad. Sci. USA 99, 16029-16034 (2002).
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 16029-16034
-
-
Mosavi, L.K.1
Minor Jr., D.L.2
Peng, Z.-Y.3
-
19
-
-
0037648552
-
Design of stable alpha-helical arrays from an idealized TPR motif
-
Main, E.R., Xiong, Y., Cocco, M.J., D'Andrea, L. & Regan, L. Design of stable alpha-helical arrays from an idealized TPR motif. Structure (Camb) 11, 497-508 (2003).
-
(2003)
Structure (Camb)
, vol.11
, pp. 497-508
-
-
Main, E.R.1
Xiong, Y.2
Cocco, M.J.3
D'Andrea, L.4
Regan, L.5
-
21
-
-
0030974119
-
In vitro selection and evolution of functional proteins by using ribosome display
-
Hanes, J. & Plückthun, A. In vitro selection and evolution of functional proteins by using ribosome display. Proc. Natl. Acad. Sci. USA 94, 4937-4942 (1997).
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 4937-4942
-
-
Hanes, J.1
Plückthun, A.2
-
22
-
-
0034005881
-
Novel fold and capsid-binding properties of the lambda-phage display platform protein gpD
-
Yang, F. et al. Novel fold and capsid-binding properties of the lambda-phage display platform protein gpD. Nat. Struct. Biol. 7, 230-237 (2000).
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 230-237
-
-
Yang, F.1
-
23
-
-
0030830868
-
Structure of an enzyme required for aminoglycoside antibiotic resistance reveals homology to eukaryotic protein kinases
-
Hon, W.C. et al. Structure of an enzyme required for aminoglycoside antibiotic resistance reveals homology to eukaryotic protein kinases. Cell 89, 887-895 (1997).
-
(1997)
Cell
, vol.89
, pp. 887-895
-
-
Hon, W.C.1
-
24
-
-
0031669205
-
Enzyme-linked immunosorbent assay for the measurement of JNK, ERK and p38 kinase activities
-
Forrer, P., Tamaskovic, R. & Jaussi, R. Enzyme-linked immunosorbent assay for the measurement of JNK, ERK and p38 kinase activities. Biol. Chem. 379, 1101-1111 (1998).
-
(1998)
Biol. Chem.
, vol.379
, pp. 1101-1111
-
-
Forrer, P.1
Tamaskovic, R.2
Jaussi, R.3
-
26
-
-
0003187567
-
The atomic structure of protein-protein recognition sites
-
Lo Conte, L., Chothia, C. & Janin, J. The atomic structure of protein-protein recognition sites. J. Mol. Biol. 285, 2177-2198 (1999).
-
(1999)
J. Mol. Biol.
, vol.285
, pp. 2177-2198
-
-
Lo Conte, L.1
Chothia, C.2
Janin, J.3
-
27
-
-
0037453089
-
Structural basis for recognition by an in vitro evolved affibody
-
Högbom, M., Eklund, M., Nygren, P.-Å. & Nordlund, P. Structural basis for recognition by an in vitro evolved affibody. Proc. Natl. Acad. Sci. USA 100, 3191-3196 (2003).
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 3191-3196
-
-
Högbom, M.1
Eklund, M.2
Nygren, P.-Å.3
Nordlund, P.4
-
28
-
-
0037102973
-
Anti-idiotypic protein domains selected from protein A-based affibody libraries
-
Eklund, M., Axelsson, L., Uhlén, M. & Nygren, P.-Å. Anti-idiotypic protein domains selected from protein A-based affibody libraries. Proteins: Struct. Funct. Genet. 48, 454-462 (2002).
-
(2002)
Proteins: Struct. Funct. Genet.
, vol.48
, pp. 454-462
-
-
Eklund, M.1
Axelsson, L.2
Uhlén, M.3
Nygren, P.-Å.4
-
29
-
-
0037453049
-
An affibody in complex with a target protein: Structure and coupled folding
-
Wahlberg, E. et al. An affibody in complex with a target protein: structure and coupled folding. Proc. Natl. Acad. Sci. USA 100, 3185-3190 (2003).
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 3185-3190
-
-
Wahlberg, E.1
-
30
-
-
0033664270
-
Picomolar affinity antibodies from a fully synthetic naive library selected and evolved by ribosome display
-
Hanes, J., Schaffitzel, C., Knappik, A. & Plückthun, A. Picomolar affinity antibodies from a fully synthetic naive library selected and evolved by ribosome display. Nat. Biotechnol. 18, 1287-1292 (2000).
-
(2000)
Nat. Biotechnol.
, vol.18
, pp. 1287-1292
-
-
Hanes, J.1
Schaffitzel, C.2
Knappik, A.3
Plückthun, A.4
-
31
-
-
0036424666
-
Structural basis of macromolecular recognition
-
Wodak, S.J. & Janin, J. Structural basis of macromolecular recognition. Adv. Protein Chem. 61, 9-73 (2002).
-
(2002)
Adv. Protein Chem.
, vol.61
, pp. 9-73
-
-
Wodak, S.J.1
Janin, J.2
-
32
-
-
0035793080
-
Tailoring in vitroevolution for protein affinity or stability
-
Jermutus, L., Honegger, A., Schwesinger, F., Hanes, J. & PlOckthun, A. Tailoring in vitroevolution for protein affinity or stability. Proc. Natl. Acad. Sci. USA 98, 75-80 (2001).
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 75-80
-
-
Jermutus, L.1
Honegger, A.2
Schwesinger, F.3
Hanes, J.4
PlOckthun, A.5
-
33
-
-
0025964038
-
Structure, function and properties of antibody binding sites
-
Mian, I.S., Bradwell, A.R. & Olson, A.J. Structure, function and properties of antibody binding sites. J. Mol. Biol. 217, 133-151 (1991).
-
(1991)
J. Mol. Biol.
, vol.217
, pp. 133-151
-
-
Mian, I.S.1
Bradwell, A.R.2
Olson, A.J.3
-
34
-
-
0034671563
-
Structural basis of inhibition of CDK-cyclin complexes by INK4 inhibitors
-
Jeffrey, P.D., Tong, L. & Pavletich, N.P. Structural basis of inhibition of CDK-cyclin complexes by INK4 inhibitors. Genes Dev. 14, 3115-3125 (2000).
-
(2000)
Genes Dev.
, vol.14
, pp. 3115-3125
-
-
Jeffrey, P.D.1
Tong, L.2
Pavletich, N.P.3
-
35
-
-
0036420965
-
Molecular recognition in antibody-antigen complexes
-
Sundberg, E.J. & Mariuzza, R.A. Molecular recognition in antibody-antigen complexes. Adv. Protein Chem. 61, 119-160 (2002).
-
(2002)
Adv. Protein Chem.
, vol.61
, pp. 119-160
-
-
Sundberg, E.J.1
Mariuzza, R.A.2
-
36
-
-
0037470496
-
Antibody multispecificity mediated by conformational diversity
-
James, L.C., Roversi, P. & Tawfik, D.S. Antibody multispecificity mediated by conformational diversity. Science 299, 1362-1367 (2003).
-
(2003)
Science
, vol.299
, pp. 1362-1367
-
-
James, L.C.1
Roversi, P.2
Tawfik, D.S.3
-
37
-
-
18544397601
-
Directed evolution of high-affinity antibody mimics using mRNA display
-
Xu, L. et al. Directed evolution of high-affinity antibody mimics using mRNA display. Chem. Biol. 9, 933-942 (2002).
-
(2002)
Chem. Biol.
, vol.9
, pp. 933-942
-
-
Xu, L.1
-
38
-
-
0346031536
-
Fluorobodies combine GFP fluorescence with the binding characteristics of antibodies
-
Zeytun, A., Jeromin, A., Scalettar, B.A., Waldo, G.S. & Bradbury, A.R. Fluorobodies combine GFP fluorescence with the binding characteristics of antibodies. Nat. Biotechnol. 21, 1473-1479 (2003).
-
(2003)
Nat. Biotechnol.
, vol.21
, pp. 1473-1479
-
-
Zeytun, A.1
Jeromin, A.2
Scalettar, B.A.3
Waldo, G.S.4
Bradbury, A.R.5
-
39
-
-
0032771488
-
The selection of intracellular antibodies
-
Cattaneo, A. & Biocca, S. The selection of intracellular antibodies. Trends Biotechnol. 17, 115-121 (1999).
-
(1999)
Trends Biotechnol.
, vol.17
, pp. 115-121
-
-
Cattaneo, A.1
Biocca, S.2
-
40
-
-
0028991525
-
Fv fragment-mediated crystallization of the membrane protein bacterial cytochrome c oxidase
-
Ostermeier, C., Iwata, S., Ludwig, B. & Michel, H. Fv fragment-mediated crystallization of the membrane protein bacterial cytochrome c oxidase. Nat. Struct. Biol. 2, 842-846 (1995).
-
(1995)
Nat. Struct. Biol.
, vol.2
, pp. 842-846
-
-
Ostermeier, C.1
Iwata, S.2
Ludwig, B.3
Michel, H.4
-
41
-
-
0004136246
-
-
Cold Spring Harbor Press, New York
-
Sambrook, J., Fritsch, E.F. & Maniatis, T. Molecular cloning: A laboratory manual, edn. 2 (Cold Spring Harbor Press, New York, 1989).
-
(1989)
Molecular Cloning: A Laboratory Manual, Edn. 2
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
42
-
-
0031958764
-
CLAMP: A biosensor kinetic data analysis program
-
Myszka, D.G. & Morton, T.A. CLAMP: a biosensor kinetic data analysis program. Trends Biochem. Sci. 23, 149-150 (1998).
-
(1998)
Trends Biochem. Sci.
, vol.23
, pp. 149-150
-
-
Myszka, D.G.1
Morton, T.A.2
-
43
-
-
0028103275
-
The CCP4 Suite: Programs for Protein Crystallography
-
Collaborative Computational Project, Number 4. The CCP4 Suite: Programs for Protein Crystallography. Acta Crystallogr. D 50, 760-763 (1994).
-
(1994)
Acta Crystallogr. D
, vol.50
, pp. 760-763
-
-
-
45
-
-
3543012707
-
Crystallography & NMR system: A new software suite for macromolecular structure determination
-
Brünger, A.T. et al. Crystallography & NMR system: A new software suite for macromolecular structure determination. Acta Crystallogr. D 54, 905-921 (1998).
-
(1998)
Acta Crystallogr. D
, vol.54
, pp. 905-921
-
-
Brünger, A.T.1
-
46
-
-
84889120137
-
Improved methods for building protein models in electron density maps and the location of errors in these models
-
Jones, T.A., Zou, J.Y., Cowan, S.W. & Kjeldgaard, M. Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Crystallogr. A 47, 110-119 (1991).
-
(1991)
Acta Crystallogr. A
, vol.47
, pp. 110-119
-
-
Jones, T.A.1
Zou, J.Y.2
Cowan, S.W.3
Kjeldgaard, M.4
-
47
-
-
0028304962
-
Satisfying hydrogen bonding potential in proteins
-
McDonald, I.K. & Thornton, J.M. Satisfying hydrogen bonding potential in proteins. J. Mol. Biol. 238, 777-793 (1994).
-
(1994)
J. Mol. Biol.
, vol.238
, pp. 777-793
-
-
McDonald, I.K.1
Thornton, J.M.2
-
48
-
-
0028922586
-
LIGPLOT: A program to generate schematic diagrams of protein-ligand interactions
-
Wallace, A.C., Laskowski, R.A. & Thornton, J.M. LIGPLOT: a program to generate schematic diagrams of protein-ligand interactions. Protein Eng. 8, 127-134 (1995).
-
(1995)
Protein Eng.
, vol.8
, pp. 127-134
-
-
Wallace, A.C.1
Laskowski, R.A.2
Thornton, J.M.3
-
49
-
-
0029881007
-
MOLMOL: A program for display and analysis of macromolecular structures
-
Koradi, R., Billeter, M. & Wüthrich, K. MOLMOL: a program for display and analysis of macromolecular structures. J. Mol. Graph. 14, 51-55 (1996).
-
(1996)
J. Mol. Graph.
, vol.14
, pp. 51-55
-
-
Koradi, R.1
Billeter, M.2
Wüthrich, K.3
-
50
-
-
0026319199
-
Protein folding and association: Insights from the interfacial and thermodynamic properties of hydrocarbons
-
Nicholls, A., Sharp, K.A. & Honig, B. Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons. Proteins: Struct. Funct. Genet. 11, 281-296 (1991).
-
(1991)
Proteins: Struct. Funct. Genet.
, vol.11
, pp. 281-296
-
-
Nicholls, A.1
Sharp, K.A.2
Honig, B.3
|