메뉴 건너뛰기




Volumn 17, Issue 10, 2010, Pages 1122-1131

Metabolomics of mycobacterium tuberculosis reveals compartmentalized co-catabolism of carbon substrates

Author keywords

[No Author keywords available]

Indexed keywords

CARBON;

EID: 78049411009     PISSN: 10745521     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.chembiol.2010.08.009     Document Type: Article
Times cited : (294)

References (56)
  • 1
    • 41749092312 scopus 로고    scopus 로고
    • Reversible compartmentalization of de novo purine biosynthetic complexes in living cells
    • S. An, R. Kumar, E.D. Sheets, and S.J. Benkovic Reversible compartmentalization of de novo purine biosynthetic complexes in living cells Science 320 2008 103 106
    • (2008) Science , vol.320 , pp. 103-106
    • An, S.1    Kumar, R.2    Sheets, E.D.3    Benkovic, S.J.4
  • 3
    • 73549105511 scopus 로고    scopus 로고
    • An anaerobic-type alpha-ketoglutarate ferredoxin oxidoreductase completes the oxidative tricarboxylic acid cycle of Mycobacterium tuberculosis
    • A.D. Baughn, S.J. Garforth, C. Vilcheze, and W.R. Jacobs Jr. An anaerobic-type alpha-ketoglutarate ferredoxin oxidoreductase completes the oxidative tricarboxylic acid cycle of Mycobacterium tuberculosis PLoS Pathog. 5 2009 e1000662
    • (2009) PLoS Pathog. , vol.5 , pp. 1000662
    • Baughn, A.D.1    Garforth, S.J.2    Vilcheze, C.3    Jacobs Jr., W.R.4
  • 4
    • 77049286017 scopus 로고
    • Biochemical differentiation of Mycobacterium tuberculosis grown in vivo and in vitro
    • H. Bloch, and W. Segal Biochemical differentiation of Mycobacterium tuberculosis grown in vivo and in vitro J. Bacteriol. 72 1956 132 141
    • (1956) J. Bacteriol. , vol.72 , pp. 132-141
    • Bloch, H.1    Segal, W.2
  • 5
    • 0000935874 scopus 로고
    • Kinetics of utilization of organic compounds in the growth of Mycobacterium tuberculosis
    • J.A. Bowles, and W. Segal Kinetics of utilization of organic compounds in the growth of Mycobacterium tuberculosis J. Bacteriol. 90 1965 157 163
    • (1965) J. Bacteriol. , vol.90 , pp. 157-163
    • Bowles, J.A.1    Segal, W.2
  • 6
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • M.M. Bradford A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding Anal. Biochem. 72 1976 248 254
    • (1976) Anal. Biochem. , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 11
    • 0001448130 scopus 로고
    • Factors affecting the growth of tubercle bacilli in liquid media
    • R.J. Dubos, and B.D. Davis Factors affecting the growth of tubercle bacilli in liquid media J. Exp. Med. 83 1946 409 423
    • (1946) J. Exp. Med. , vol.83 , pp. 409-423
    • Dubos, R.J.1    Davis, B.D.2
  • 12
    • 0035887504 scopus 로고    scopus 로고
    • Reprogramming of the macrophage transcriptome in response to interferon-gamma and Mycobacterium tuberculosis: Signaling roles of nitric oxide synthase-2 and phagocyte oxidase
    • S. Ehrt, D. Schnappinger, S. Bekiranov, J. Drenkow, S. Shi, T.R. Gingeras, T. Gaasterland, G. Schoolnik, and C. Nathan Reprogramming of the macrophage transcriptome in response to interferon-gamma and Mycobacterium tuberculosis: signaling roles of nitric oxide synthase-2 and phagocyte oxidase J. Exp. Med. 194 2001 1123 1140
    • (2001) J. Exp. Med. , vol.194 , pp. 1123-1140
    • Ehrt, S.1    Schnappinger, D.2    Bekiranov, S.3    Drenkow, J.4    Shi, S.5    Gingeras, T.R.6    Gaasterland, T.7    Schoolnik, G.8    Nathan, C.9
  • 17
    • 47549110972 scopus 로고    scopus 로고
    • Carbon catabolite repression in bacteria: Many ways to make the most out of nutrients
    • B. Gorke, and J. Stulke Carbon catabolite repression in bacteria: many ways to make the most out of nutrients Nat. Rev. Microbiol. 6 2008 613 624
    • (2008) Nat. Rev. Microbiol. , vol.6 , pp. 613-624
    • Gorke, B.1    Stulke, J.2
  • 18
    • 0000228768 scopus 로고
    • The continuous culture of bacteria; A theoretical and experimental study
    • D. Herbert, R. Elsworth, and R.C. Telling The continuous culture of bacteria; a theoretical and experimental study J. Gen. Microbiol. 14 1956 601 622
    • (1956) J. Gen. Microbiol. , vol.14 , pp. 601-622
    • Herbert, D.1    Elsworth, R.2    Telling, R.C.3
  • 20
    • 41649116701 scopus 로고    scopus 로고
    • Disclosure of the mycobacterial outer membrane: Cryo-electron tomography and vitreous sections reveal the lipid bilayer structure
    • C. Hoffmann, A. Leis, M. Niederweis, J.M. Plitzko, and H. Engelhardt Disclosure of the mycobacterial outer membrane: cryo-electron tomography and vitreous sections reveal the lipid bilayer structure Proc. Natl. Acad. Sci. USA 105 2008 3963 3967
    • (2008) Proc. Natl. Acad. Sci. USA , vol.105 , pp. 3963-3967
    • Hoffmann, C.1    Leis, A.2    Niederweis, M.3    Plitzko, J.M.4    Engelhardt, H.5
  • 22
    • 76249130402 scopus 로고    scopus 로고
    • Metabolic fluxes during strong carbon catabolite repression by malate in Bacillus subtilis
    • R.J. Kleijn, J.M. Buescher, L. Le Chat, M. Jules, S. Aymerich, and U. Sauer Metabolic fluxes during strong carbon catabolite repression by malate in Bacillus subtilis J. Biol. Chem. 285 2010 1587 1596
    • (2010) J. Biol. Chem. , vol.285 , pp. 1587-1596
    • Kleijn, R.J.1    Buescher, J.M.2    Le Chat, L.3    Jules, M.4    Aymerich, S.5    Sauer, U.6
  • 23
    • 0031719199 scopus 로고    scopus 로고
    • Growth kinetics of suspended microbial cells: From single-substrate- controlled growth to mixed-substrate kinetics
    • K. Kovarova-Kovar, and T. Egli Growth kinetics of suspended microbial cells: from single-substrate-controlled growth to mixed-substrate kinetics Microbiol. Mol. Biol. Rev. 62 1998 646 666
    • (1998) Microbiol. Mol. Biol. Rev. , vol.62 , pp. 646-666
    • Kovarova-Kovar, K.1    Egli, T.2
  • 25
    • 77953105101 scopus 로고    scopus 로고
    • Gluconeogenic carbon flow of tricarboxylic acid cycle intermediates is critical for Mycobacterium tuberculosis to establish and maintain infection
    • J. Marrero, K.Y. Rhee, D. Schnappinger, K. Pethe, and S. Ehrt Gluconeogenic carbon flow of tricarboxylic acid cycle intermediates is critical for Mycobacterium tuberculosis to establish and maintain infection Proc. Natl. Acad. Sci. USA 107 2010 9819 9824
    • (2010) Proc. Natl. Acad. Sci. USA , vol.107 , pp. 9819-9824
    • Marrero, J.1    Rhee, K.Y.2    Schnappinger, D.3    Pethe, K.4    Ehrt, S.5
  • 28
    • 20944450448 scopus 로고    scopus 로고
    • Mycobacterium tuberculosis isocitrate lyases 1 and 2 are jointly required for in vivo growth and virulence
    • E.J. Munoz-Elias, and J.D. McKinney Mycobacterium tuberculosis isocitrate lyases 1 and 2 are jointly required for in vivo growth and virulence Nat. Med. 11 2005 638 644
    • (2005) Nat. Med. , vol.11 , pp. 638-644
    • Munoz-Elias, E.J.1    McKinney, J.D.2
  • 29
    • 33644819211 scopus 로고    scopus 로고
    • Carbon metabolism of intracellular bacteria
    • E.J. Munoz-Elias, and J.D. McKinney Carbon metabolism of intracellular bacteria Cell. Microbiol. 8 2006 10 22
    • (2006) Cell. Microbiol. , vol.8 , pp. 10-22
    • Munoz-Elias, E.J.1    McKinney, J.D.2
  • 31
    • 49549099267 scopus 로고    scopus 로고
    • Analysis of hydrophilic metabolites by high-performance liquid chromatography-mass spectrometry using a silica hydride-based stationary phase
    • J.J. Pesek, M.T. Matyska, S.M. Fischer, and T.R. Sana Analysis of hydrophilic metabolites by high-performance liquid chromatography-mass spectrometry using a silica hydride-based stationary phase J. Chromatogr. A 1204 2008 48 55
    • (2008) J. Chromatogr. A , vol.1204 , pp. 48-55
    • Pesek, J.J.1    Matyska, M.T.2    Fischer, S.M.3    Sana, T.R.4
  • 32
    • 34548023950 scopus 로고    scopus 로고
    • Acidic acetonitrile for cellular metabolome extraction from Escherichia coli
    • J.D. Rabinowitz, and E. Kimball Acidic acetonitrile for cellular metabolome extraction from Escherichia coli Anal. Chem. 79 2007 6167 6173
    • (2007) Anal. Chem. , vol.79 , pp. 6167-6173
    • Rabinowitz, J.D.1    Kimball, E.2
  • 33
    • 13444249851 scopus 로고    scopus 로고
    • Global strategies to integrate the proteome and metabolome
    • A. Saghatelian, and B.F. Cravatt Global strategies to integrate the proteome and metabolome Curr. Opin. Chem. Biol. 9 2005 62 68
    • (2005) Curr. Opin. Chem. Biol. , vol.9 , pp. 62-68
    • Saghatelian, A.1    Cravatt, B.F.2
  • 34
    • 63449119987 scopus 로고    scopus 로고
    • Molecular formula and METLIN Personal Metabolite Database matching applied to the identification of compounds generated by LC/TOF-MS
    • T.R. Sana, J.C. Roark, X. Li, K. Waddell, and S.M. Fischer Molecular formula and METLIN Personal Metabolite Database matching applied to the identification of compounds generated by LC/TOF-MS J. Biomol. Tech. 19 2008 258 266
    • (2008) J. Biomol. Tech. , vol.19 , pp. 258-266
    • Sana, T.R.1    Roark, J.C.2    Li, X.3    Waddell, K.4    Fischer, S.M.5
  • 36
    • 0032753923 scopus 로고    scopus 로고
    • Metabolic flux ratio analysis of genetic and environmental modulations of Escherichia coli central carbon metabolism
    • U. Sauer, D.R. Lasko, J. Fiaux, M. Hochuli, R. Glaser, T. Szyperski, K. Wuthrich, and J.E. Bailey Metabolic flux ratio analysis of genetic and environmental modulations of Escherichia coli central carbon metabolism J. Bacteriol. 181 1999 6679 6688 (Pubitemid 29517982)
    • (1999) Journal of Bacteriology , vol.181 , Issue.21 , pp. 6679-6688
    • Sauer, U.1    Lasko, D.R.2    Fiaux, J.3    Hochuli, M.4    Glaser, R.5    Szyperski, T.6    Wuthrich, K.7    Bailey, J.E.8
  • 37
    • 77749264485 scopus 로고    scopus 로고
    • Spatially ordered dynamics of the bacterial carbon fixation machinery
    • D.F. Savage, B. Afonso, A.H. Chen, and P.A. Silver Spatially ordered dynamics of the bacterial carbon fixation machinery Science 327 2010 1258 1261
    • (2010) Science , vol.327 , pp. 1258-1261
    • Savage, D.F.1    Afonso, B.2    Chen, A.H.3    Silver, P.A.4
  • 39
    • 29644437414 scopus 로고    scopus 로고
    • Dihydrolipoamide acyltransferase is critical for Mycobacterium tuberculosis pathogenesis
    • S. Shi, and S. Ehrt Dihydrolipoamide acyltransferase is critical for Mycobacterium tuberculosis pathogenesis Infect. Immun. 74 2006 56 63
    • (2006) Infect. Immun. , vol.74 , pp. 56-63
    • Shi, S.1    Ehrt, S.2
  • 40
    • 0033155962 scopus 로고    scopus 로고
    • Bioreaction network topology and metabolic flux ratio analysis by biosynthetic fractional 13C labeling and two-dimensional NMR spectroscopy
    • T. Szyperski, R.W. Glaser, M. Hochuli, J. Fiaux, U. Sauer, J.E. Bailey, and K. Wuthrich Bioreaction network topology and metabolic flux ratio analysis by biosynthetic fractional 13C labeling and two-dimensional NMR spectroscopy Metab. Eng. 1 1999 189 197
    • (1999) Metab. Eng. , vol.1 , pp. 189-197
    • Szyperski, T.1    Glaser, R.W.2    Hochuli, M.3    Fiaux, J.4    Sauer, U.5    Bailey, J.E.6    Wuthrich, K.7
  • 41
    • 1842585499 scopus 로고    scopus 로고
    • The temporal expression profile of Mycobacterium tuberculosis infection in mice
    • A.M. Talaat, R. Lyons, S.T. Howard, and S.A. Johnston The temporal expression profile of Mycobacterium tuberculosis infection in mice Proc. Natl. Acad. Sci. USA 101 2004 4602 4607
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 4602-4607
    • Talaat, A.M.1    Lyons, R.2    Howard, S.T.3    Johnston, S.A.4
  • 42
    • 74849140487 scopus 로고    scopus 로고
    • Structure and mechanisms of a protein-based organelle in Escherichia coli
    • S. Tanaka, M.R. Sawaya, and T.O. Yeates Structure and mechanisms of a protein-based organelle in Escherichia coli Science 327 2010 81 84
    • (2010) Science , vol.327 , pp. 81-84
    • Tanaka, S.1    Sawaya, M.R.2    Yeates, T.O.3
  • 43
    • 22644447865 scopus 로고    scopus 로고
    • Variant tricarboxylic acid cycle in Mycobacterium tuberculosis: Identification of alpha-ketoglutarate decarboxylase
    • J. Tian, R. Bryk, M. Itoh, M. Suematsu, and C. Nathan Variant tricarboxylic acid cycle in Mycobacterium tuberculosis: identification of alpha-ketoglutarate decarboxylase Proc. Natl. Acad. Sci. USA 102 2005 10670 10675
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 10670-10675
    • Tian, J.1    Bryk, R.2    Itoh, M.3    Suematsu, M.4    Nathan, C.5
  • 44
    • 22644436537 scopus 로고    scopus 로고
    • Mycobacterium tuberculosis appears to lack alpha-ketoglutarate dehydrogenase and encodes pyruvate dehydrogenase in widely separated genes
    • J. Tian, R. Bryk, S. Shi, H. Erdjument-Bromage, P. Tempst, and C. Nathan Mycobacterium tuberculosis appears to lack alpha-ketoglutarate dehydrogenase and encodes pyruvate dehydrogenase in widely separated genes Mol. Microbiol. 57 2005 859 868
    • (2005) Mol. Microbiol. , vol.57 , pp. 859-868
    • Tian, J.1    Bryk, R.2    Shi, S.3    Erdjument-Bromage, H.4    Tempst, P.5    Nathan, C.6
  • 46
    • 20944448468 scopus 로고    scopus 로고
    • Microbial metabolomics: Replacing trial-and-error by the unbiased selection and ranking of targets
    • M.J. van der Werf, R.H. Jellema, and T. Hankemeier Microbial metabolomics: replacing trial-and-error by the unbiased selection and ranking of targets J. Ind. Microbiol. Biotechnol. 32 2005 234 252
    • (2005) J. Ind. Microbiol. Biotechnol. , vol.32 , pp. 234-252
    • Van Der Werf, M.J.1    Jellema, R.H.2    Hankemeier, T.3
  • 48
    • 0035028841 scopus 로고    scopus 로고
    • Utility of blood cultures and incidence of mycobacteremia in patients with suspected tuberculosis in a South African infectious disease referral hospital
    • A. von Gottberg, L. Sacks, S. Machala, and L. Blumberg Utility of blood cultures and incidence of mycobacteremia in patients with suspected tuberculosis in a South African infectious disease referral hospital Int. J. Tuberc. Lung Dis. 5 2001 80 86
    • (2001) Int. J. Tuberc. Lung Dis. , vol.5 , pp. 80-86
    • Von Gottberg, A.1    Sacks, L.2    MacHala, S.3    Blumberg, L.4
  • 49
    • 0034115397 scopus 로고    scopus 로고
    • Quantitative determination of metabolic fluxes during co-utilization of two carbon sources: Comparative analyses with Corynebacterium glutamicum during growth on acetate and/or glucose
    • V.F. Wendisch, A.A. de Graaf, H. Sahm, and B.J. Eikmanns Quantitative determination of metabolic fluxes during co-utilization of two carbon sources: comparative analyses with Corynebacterium glutamicum during growth on acetate and/or glucose J. Bacteriol. 182 2000 3088 3096
    • (2000) J. Bacteriol. , vol.182 , pp. 3088-3096
    • Wendisch, V.F.1    De Graaf, A.A.2    Sahm, H.3    Eikmanns, B.J.4
  • 51
    • 84959070672 scopus 로고
    • Studies on the metabolism of Mycobacterium tuberculosis. IV. The effect of fatty acids on the growth of M. tuberculosis var. hominis
    • A.S. Youmans, and G.P. Youmans Studies on the metabolism of Mycobacterium tuberculosis. IV. The effect of fatty acids on the growth of M. tuberculosis var. hominis J. Bacteriol. 67 1954 731 733
    • (1954) J. Bacteriol. , vol.67 , pp. 731-733
    • Youmans, A.S.1    Youmans, G.P.2
  • 52
    • 78049414680 scopus 로고
    • Studies on the metabolism of Mycobacterium tuberculosis. I. The effect of carbohydrates and alcohols on the growth of Mycobacterium tuberculosis var. hominis
    • G.P. Youmans, and A.S. Youmans Studies on the metabolism of Mycobacterium tuberculosis. I. The effect of carbohydrates and alcohols on the growth of Mycobacterium tuberculosis var. hominis J. Bacteriol. 65 1953 92 95
    • (1953) J. Bacteriol. , vol.65 , pp. 92-95
    • Youmans, G.P.1    Youmans, A.S.2
  • 53
  • 55
    • 49449107199 scopus 로고    scopus 로고
    • Direct visualization of the outer membrane of mycobacteria and corynebacteria in their native state
    • B. Zuber, M. Chami, C. Houssin, J. Dubochet, G. Griffiths, and M. Daffe Direct visualization of the outer membrane of mycobacteria and corynebacteria in their native state J. Bacteriol. 190 2008 5672 5680
    • (2008) J. Bacteriol. , vol.190 , pp. 5672-5680
    • Zuber, B.1    Chami, M.2    Houssin, C.3    Dubochet, J.4    Griffiths, G.5    Daffe, M.6
  • 56
    • 0014013188 scopus 로고
    • Feedback inhibition of glycerol kinase, a catabolic enzyme in Escherichia coli
    • N. Zwaig, and E.C. Lin Feedback inhibition of glycerol kinase, a catabolic enzyme in Escherichia coli Science 153 1966 755 757
    • (1966) Science , vol.153 , pp. 755-757
    • Zwaig, N.1    Lin, E.C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.