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Volumn 431, Issue 3, 2010, Pages 391-399

Transcriptional activation requires protection of the TATA-binding protein Tbp1 by the ubiquitin-specific protease Ubp3

Author keywords

De ubiquitination; Proteasome; Protein degradation; Regulation of gene expression; TATA binding protein (Tbp); Ubiquitin

Indexed keywords

DEFECTS; DEGRADATION; GENE EXPRESSION REGULATION; TRANSCRIPTION; YEAST;

EID: 78049237779     PISSN: 02646021     EISSN: 14708728     Source Type: Journal    
DOI: 10.1042/BJ20101152     Document Type: Article
Times cited : (18)

References (40)
  • 1
    • 20444382737 scopus 로고    scopus 로고
    • Regulation of transcription, from lambda to eukaryotes
    • Ptashne, M. (2005) Regulation of transcription, from lambda to eukaryotes. Trends Biochem. Sci. 30, 275-279
    • (2005) Trends Biochem. Sci. , vol.30 , pp. 275-279
    • Ptashne, M.1
  • 2
    • 77954760923 scopus 로고    scopus 로고
    • The TATA box regulates TATA-binding protein (TBP) dynamics in vivo
    • Tora, L. and Timmers, M. (2010) The TATA box regulates TATA-binding protein (TBP) dynamics in vivo. Trends Biochem. Sci. 35, 309-314
    • (2010) Trends Biochem. Sci. , vol.35 , pp. 309-314
    • Tora, L.1    Timmers, M.2
  • 3
    • 18844451820 scopus 로고    scopus 로고
    • Mediator and the mechanism of transcriptional activation
    • Kornberg, R. D. (2005) Mediator and the mechanism of transcriptional activation. Trends Biochem. Sci. 30, 235-239
    • (2005) Trends Biochem. Sci. , vol.30 , pp. 235-239
    • Kornberg, R.D.1
  • 4
    • 66049096618 scopus 로고    scopus 로고
    • The basal initiation machinery: Beyond the general transcription factors
    • Sikorski, T. W. and Buratowski, S. (2009) The basal initiation machinery: beyond the general transcription factors. Curr. Opin. Cell Biol. 21, 344-351
    • (2009) Curr. Opin. Cell Biol. , vol.21 , pp. 344-351
    • Sikorski, T.W.1    Buratowski, S.2
  • 5
    • 77953711351 scopus 로고    scopus 로고
    • TFIIA and the transactivator Rap1 cooperate to commit TFIID for transcription initiation
    • Papai, G., Tripathi, M. K., Ruhlmann, C., Layer, J. H., Weil, P. A. and Schultz, P. (2010) TFIIA and the transactivator Rap1 cooperate to commit TFIID for transcription initiation. Nature 465, 956-960
    • (2010) Nature , vol.465 , pp. 956-960
    • Papai, G.1    Tripathi, M.K.2    Ruhlmann, C.3    Layer, J.H.4    Weil, P.A.5    Schultz, P.6
  • 6
    • 84891703149 scopus 로고    scopus 로고
    • Activator control of nucleosome occupancy in activation and repression of transcription
    • Bryant, G. O., Prabhu, V., Floer, M., Wang, X., Spagna, D., Schreiber, D. and Ptashne, M. (2008) Activator control of nucleosome occupancy in activation and repression of transcription. PLoS Biol. 6, 2928-2939
    • (2008) PLoS Biol. , vol.6 , pp. 2928-2939
    • Bryant, G.O.1    Prabhu, V.2    Floer, M.3    Wang, X.4    Spagna, D.5    Schreiber, D.6    Ptashne, M.7
  • 8
    • 0035499392 scopus 로고    scopus 로고
    • Transcriptional repression: The long and the short of it
    • Courey, A. J. and Jia, S. (2001) Transcriptional repression: the long and the short of it. Genes Dev. 15, 2786-2796
    • (2001) Genes Dev. , vol.15 , pp. 2786-2796
    • Courey, A.J.1    Jia, S.2
  • 9
    • 0343924289 scopus 로고    scopus 로고
    • Repression by Ume6 involves recruitment of a complex containing Sin3 corepressor and Rpd3 histone deacetylase to target promoters
    • Kadosh, D. and Struhl, K. (1997) Repression by Ume6 involves recruitment of a complex containing Sin3 corepressor and Rpd3 histone deacetylase to target promoters. Cell 89, 365-371
    • (1997) Cell , vol.89 , pp. 365-371
    • Kadosh, D.1    Struhl, K.2
  • 10
    • 60349089645 scopus 로고    scopus 로고
    • Nucleosome positioning and gene regulation: Advances through genomics
    • Jiang, C. and Pugh, B. F. (2009) Nucleosome positioning and gene regulation: advances through genomics. Nat. Rev. Genet. 10, 161-172
    • (2009) Nat. Rev. Genet. , vol.10 , pp. 161-172
    • Jiang, C.1    Pugh, B.F.2
  • 11
    • 0032796250 scopus 로고    scopus 로고
    • Analysis of the in vivo interaction between a basic repressor and an acidic activator
    • Wellhausen, A. and Lehming, N. (1999) Analysis of the in vivo interaction between a basic repressor and an acidic activator. FEBS Lett. 453, 299-304
    • (1999) FEBS Lett. , vol.453 , pp. 299-304
    • Wellhausen, A.1    Lehming, N.2
  • 12
    • 33645130011 scopus 로고    scopus 로고
    • Glucose signaling in Saccharomyces cerevisiae
    • Santangelo, G. M. (2006) Glucose signaling in Saccharomyces cerevisiae. Microbiol. Mol. Biol. Rev. 70, 253-282
    • (2006) Microbiol. Mol. Biol. Rev. , vol.70 , pp. 253-282
    • Santangelo, G.M.1
  • 13
    • 0037041395 scopus 로고    scopus 로고
    • An extensive network of coupling among gene expression machines
    • Maniatis, T. and Reed, R. (2002) An extensive network of coupling among gene expression machines. Nature 416, 499-506
    • (2002) Nature , vol.416 , pp. 499-506
    • Maniatis, T.1    Reed, R.2
  • 14
    • 33745195271 scopus 로고    scopus 로고
    • Yeast Gal4, a transcriptional paradigm revisited
    • Traven, A., Jelicic, B. and Sopta, M. (2006) Yeast Gal4, a transcriptional paradigm revisited. EMBO Rep. 7, 496-499
    • (2006) EMBO Rep. , vol.7 , pp. 496-499
    • Traven, A.1    Jelicic, B.2    Sopta, M.3
  • 15
    • 21744441769 scopus 로고    scopus 로고
    • Eukaryotic transcription factors as direct nutrient sensors
    • Sellick, C. A. and Reece, R. J. (2005) Eukaryotic transcription factors as direct nutrient sensors. Trends Biochem. Sci. 30, 405-412
    • (2005) Trends Biochem. Sci. , vol.30 , pp. 405-412
    • Sellick, C.A.1    Reece, R.J.2
  • 16
    • 0037774738 scopus 로고    scopus 로고
    • Transcriptional control of nonfermentative metabolism in the yeast Saccharomyces cerevisiae
    • Schuller, H. J. (2003) Transcriptional control of nonfermentative metabolism in the yeast Saccharomyces cerevisiae. Curr. Genet. 43, 139-160
    • (2003) Curr. Genet. , vol.43 , pp. 139-160
    • Schuller, H.J.1
  • 18
    • 0034234638 scopus 로고    scopus 로고
    • Turning genes off by Ssn6-Tup1: A conserved system of transcriptional repression in eukaryotes
    • Smith, R. L. and Johnson, A. D. (2000) Turning genes off by Ssn6-Tup1: a conserved system of transcriptional repression in eukaryotes. Trends Biochem. Sci. 25, 325-330
    • (2000) Trends Biochem. Sci. , vol.25 , pp. 325-330
    • Smith, R.L.1    Johnson, A.D.2
  • 19
    • 40849124517 scopus 로고    scopus 로고
    • Genetic evidence for sites of interaction between the Gal3 and Gal80 proteins of the Saccharomyces cerevisiae GAL gene switch
    • Diep, C. Q., Tao, X., Pilauri, V., Losiewicz, M., Blank, T. E. and Hopper, J. E. (2008) Genetic evidence for sites of interaction between the Gal3 and Gal80 proteins of the Saccharomyces cerevisiae GAL gene switch. Genetics 178, 725-736
    • (2008) Genetics , vol.178 , pp. 725-736
    • Diep, C.Q.1    Tao, X.2    Pilauri, V.3    Losiewicz, M.4    Blank, T.E.5    Hopper, J.E.6
  • 20
    • 0037335034 scopus 로고    scopus 로고
    • How the ubiquitin-proteasome system controls transcription
    • Muratani, M. and Tansey, W. P. (2003) How the ubiquitin-proteasome system controls transcription. Nat. Rev. Mol. Cell Biol. 4, 1-10
    • (2003) Nat. Rev. Mol. Cell Biol. , vol.4 , pp. 1-10
    • Muratani, M.1    Tansey, W.P.2
  • 22
  • 23
    • 0033279836 scopus 로고    scopus 로고
    • SCF and Cullin/Ring H2-based ubiquitin ligases
    • Deshaies, R. J. (1999) SCF and Cullin/Ring H2-based ubiquitin ligases. Annu. Rev. Cell Dev. Biol. 15, 435-467
    • (1999) Annu. Rev. Cell Dev. Biol. , vol.15 , pp. 435-467
    • Deshaies, R.J.1
  • 24
    • 17644386183 scopus 로고    scopus 로고
    • The F box protein Dsg1/Mdm30 is a transcriptional coactivator that stimulates Gal4 turnover and cotranscriptional mRNA processing
    • Muratani, M., Kung, C., Shorkat, K. M. and Tansey, W. P. (2005) The F box protein Dsg1/Mdm30 is a transcriptional coactivator that stimulates Gal4 turnover and cotranscriptional mRNA processing. Cell 120, 887-899
    • (2005) Cell , vol.120 , pp. 887-899
    • Muratani, M.1    Kung, C.2    Shorkat, K.M.3    Tansey, W.P.4
  • 25
    • 33748331286 scopus 로고    scopus 로고
    • Proteolytic turnover of the Gal4 transcription factor is not required for function in vivo
    • Nalley, K., Johnston, S. A. and Kodadek, T. (2006) Proteolytic turnover of the Gal4 transcription factor is not required for function in vivo. Nature 442, 1054-1057
    • (2006) Nature , vol.442 , pp. 1054-1057
    • Nalley, K.1    Johnston, S.A.2    Kodadek, T.3
  • 26
    • 77953322730 scopus 로고    scopus 로고
    • Proteolytic instability and the action of nonclassical transcriptional activators
    • Wang, X., Muratani, M., Tansey, W. P. and Ptashne, M. (2010) Proteolytic instability and the action of nonclassical transcriptional activators. Curr. Biol. 20, 868-871
    • (2010) Curr. Biol. , vol.20 , pp. 868-871
    • Wang, X.1    Muratani, M.2    Tansey, W.P.3    Ptashne, M.4
  • 27
    • 67650620318 scopus 로고    scopus 로고
    • Regulation and cellular roles of ubiquitin-specific deubiquitinating enzymes
    • Reyes-Turcu, F. E., Ventii, K. H. and Wilkinson, K. D. (2009) Regulation and cellular roles of ubiquitin-specific deubiquitinating enzymes. Annu. Rev. Biochem. 78, 363-397
    • (2009) Annu. Rev. Biochem. , vol.78 , pp. 363-397
    • Reyes-Turcu, F.E.1    Ventii, K.H.2    Wilkinson, K.D.3
  • 29
    • 43049138051 scopus 로고    scopus 로고
    • Mature ribosomes are selectively degraded upon starvation by an autophagy pathway requiring the Ubp3p/Bre5p ubiquitin protease
    • Kraft, C., Deplazes, A., Sohrmann, M. and Peter, M. (2008) Mature ribosomes are selectively degraded upon starvation by an autophagy pathway requiring the Ubp3p/Bre5p ubiquitin protease. Nat. Cell Biol. 10, 602-610
    • (2008) Nat. Cell Biol. , vol.10 , pp. 602-610
    • Kraft, C.1    Deplazes, A.2    Sohrmann, M.3    Peter, M.4
  • 30
    • 9644278072 scopus 로고    scopus 로고
    • Purification of active TFIID from Saccharomyces cerevisiae. Extensive promoter contacts and co-activator function
    • Auty, R., Steen, H., Myers, L. C., Persinger, J., Bartholomew, B., Gygi, S. P. and Buratowski, S. (2004) Purification of active TFIID from Saccharomyces cerevisiae. Extensive promoter contacts and co-activator function. J. Biol. Chem. 279, 49973-49981
    • (2004) J. Biol. Chem. , vol.279 , pp. 49973-49981
    • Auty, R.1    Steen, H.2    Myers, L.C.3    Persinger, J.4    Bartholomew, B.5    Gygi, S.P.6    Buratowski, S.7
  • 31
    • 0037442522 scopus 로고    scopus 로고
    • The TATA-binding protein is not an essential target of the transcriptional activators Gal4p and Gcn4p in Saccharomyces cerevisiae
    • Bongards, C., Chew, B. S. and Lehming, N. (2003) The TATA-binding protein is not an essential target of the transcriptional activators Gal4p and Gcn4p in Saccharomyces cerevisiae. Biochem. J. 370, 141-147
    • (2003) Biochem. J. , vol.370 , pp. 141-147
    • Bongards, C.1    Chew, B.S.2    Lehming, N.3
  • 32
    • 34548175453 scopus 로고    scopus 로고
    • TFIIB/SUA7(E202G) is an allele-specific suppressor of TBP1(E186D)
    • Chew, B. S. and Lehming, N. (2007) TFIIB/SUA7(E202G) is an allele-specific suppressor of TBP1(E186D). Biochem. J. 406, 265-271
    • (2007) Biochem. J. , vol.406 , pp. 265-271
    • Chew, B.S.1    Lehming, N.2
  • 33
    • 0023392267 scopus 로고
    • A method for gene disruption that allows repeated use of URA3 selection in the construction of multiply disrupted yeast strains
    • Alani, E., Cao, L. and Kleckner, N. (1987) A method for gene disruption that allows repeated use of URA3 selection in the construction of multiply disrupted yeast strains. Genetics 116, 541-545
    • (1987) Genetics , vol.116 , pp. 541-545
    • Alani, E.1    Cao, L.2    Kleckner, N.3
  • 34
    • 0024266139 scopus 로고
    • New yeast - Escherichia coli shuttle vectors constructed with in vitro mutagenized yeast genes lacking six-base pair restriction sites
    • Gietz, R. D. and Sugino, A. (1988) New yeast - Escherichia coli shuttle vectors constructed with in vitro mutagenized yeast genes lacking six-base pair restriction sites. Gene 74, 527-534
    • (1988) Gene , vol.74 , pp. 527-534
    • Gietz, R.D.1    Sugino, A.2
  • 35
    • 0024669291 scopus 로고
    • A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae
    • Sikorski, R. S. and Hieter, P. (1989) A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. Genetics 122, 19-27
    • (1989) Genetics , vol.122 , pp. 19-27
    • Sikorski, R.S.1    Hieter, P.2
  • 36
    • 0027444947 scopus 로고
    • S. cerevisiae 26S protease mutants arrest cell division in G2/metaphase
    • Ghislain, M., Udvardy, A. and Mann, C. (1993) S. cerevisiae 26S protease mutants arrest cell division in G2/metaphase. Nature 366, 358-362
    • (1993) Nature , vol.366 , pp. 358-362
    • Ghislain, M.1    Udvardy, A.2    Mann, C.3
  • 37
    • 38849110179 scopus 로고    scopus 로고
    • Targeting ubiquitin specific proteases for drug discovery
    • Daviet, L. and Colland, F. (2008) Targeting ubiquitin specific proteases for drug discovery. Biochimie 90, 270-283
    • (2008) Biochimie , vol.90 , pp. 270-283
    • Daviet, L.1    Colland, F.2
  • 38
    • 0038387865 scopus 로고    scopus 로고
    • Ubp3 requires a cofactor, Bre5, to specifically de-ubiquitinate the CO-PII protein, Sec23
    • Cohen, M., Stutz, F., Belgareh, N., Haguenauer-Tsapis, R. and Dargemont, C. (2003) Ubp3 requires a cofactor, Bre5, to specifically de-ubiquitinate the CO-PII protein, Sec23. Nat. Cell Biol. 5, 661-667
    • (2003) Nat. Cell Biol. , vol.5 , pp. 661-667
    • Cohen, M.1    Stutz, F.2    Belgareh, N.3    Haguenauer-Tsapis, R.4    Dargemont, C.5
  • 39
    • 0033152140 scopus 로고    scopus 로고
    • A role for TBP dimerization in preventing unregulated gene expression
    • Jackson-Fisher, A. J., Chitikila, C., Mitra, M. and Pugh, B. F. (1999) A role for TBP dimerization in preventing unregulated gene expression. Mol. Cell 3, 717-727
    • (1999) Mol. Cell , vol.3 , pp. 717-727
    • Jackson-Fisher, A.J.1    Chitikila, C.2    Mitra, M.3    Pugh, B.F.4
  • 40
    • 34447311914 scopus 로고    scopus 로고
    • H2B ubiquitylation acts as a barrier to Ctk1 nucleosomal recruitment prior to removal by Ubp8 within a SAGA-related complex
    • Wyce, A., Xiao, T., Whelan, K. A., Kosman, C., Walter, W., Eick, D., Hughes, T. R., Krogan, N. J., Strahl, B. D. and Berger, S. L. (2007) H2B ubiquitylation acts as a barrier to Ctk1 nucleosomal recruitment prior to removal by Ubp8 within a SAGA-related complex. Mol. Cell 27, 275-288
    • (2007) Mol. Cell , vol.27 , pp. 275-288
    • Wyce, A.1    Xiao, T.2    Whelan, K.A.3    Kosman, C.4    Walter, W.5    Eick, D.6    Hughes, T.R.7    Krogan, N.J.8    Strahl, B.D.9    Berger, S.L.10


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