-
1
-
-
69149084832
-
A DNA barcode for land plants
-
CBOL PWG (2009) A DNA barcode for land plants. Proc Natl Acad Sci U S A 106: 12794-12797.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 12794-12797
-
-
Cbol, P.W.G.1
-
3
-
-
31344432889
-
The promise of DNA barcoding for taxonomy
-
Hebert PDN, Gregory TR (2005) The promise of DNA barcoding for taxonomy. Syst Biol 54: 852-859.
-
(2005)
Syst Biol
, vol.54
, pp. 852-859
-
-
Hebert, P.D.N.1
Gregory, T.R.2
-
4
-
-
0042531561
-
Barcoding animal life: Cytochrome c oxidase subunit 1 divergences among closely related species
-
Hebert PDN, Ratnasingham S, deWaard JR (2003b) Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species. Proc Biol Sci 270 Suppl 1: S96-99.
-
(2003)
Proc Biol Sci
, vol.270
, Issue.1 SUPPL.
-
-
Hebert, P.D.N.1
Ratnasingham, S.2
Dewaard, J.R.3
-
5
-
-
42949114454
-
DNA barcoding the floras of biodiversity hotspots
-
Lahaye R, van der Bank M, Bogarin D, Warner J, Pupulin F, et al. (2008) DNA barcoding the floras of biodiversity hotspots. Proc Natl Acad Sci U S A 105: 2923-2928.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 2923-2928
-
-
Lahaye, R.1
van der Bank, M.2
Bogarin, D.3
Warner, J.4
Pupulin, F.5
-
6
-
-
33645760502
-
Towards writing the encyclopedia of life: An introduction to DNA barcoding
-
Savolainen V, Cowan RS, Vogler AP, Roderick GK, Lane R (2005) Towards writing the encyclopedia of life: an introduction to DNA barcoding. Philos Trans R Soc Lond B Biol Sci 360: 1805-1811.
-
(2005)
Philos Trans R Soc Lond B Biol Sci
, vol.360
, pp. 1805-1811
-
-
Savolainen, V.1
Cowan, R.S.2
Vogler, A.P.3
Roderick, G.K.4
Lane, R.5
-
7
-
-
32244434954
-
DNA barcodes distinguish species of tropical Lepidoptera
-
Hajibabaei M, Janzen DH, Burns JM, Hallwachs W, Hebert PD (2006a) DNA barcodes distinguish species of tropical Lepidoptera. Proc Natl Acad Sci U S A 103: 968-971.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 968-971
-
-
Hajibabaei, M.1
Janzen, D.H.2
Burns, J.M.3
Hallwachs, W.4
Hebert, P.D.5
-
8
-
-
34447337206
-
Design and applicability of DNA arrays and DNA barcodes in biodiversity monitoring
-
Hajibabaei M, Singer GA, Clare EL, Hebert PD (2007) Design and applicability of DNA arrays and DNA barcodes in biodiversity monitoring. BMC Biol 5: 24.
-
(2007)
BMC Biol
, vol.5
, pp. 24
-
-
Hajibabaei, M.1
Singer, G.A.2
Clare, E.L.3
Hebert, P.D.4
-
9
-
-
19744383885
-
Taxonomy. Will DNA bar codes breathe life into classification?
-
Marshall E (2005) Taxonomy. Will DNA bar codes breathe life into classification? Science 307: 1037.
-
(2005)
Science
, vol.307
, pp. 1037
-
-
Marshall, E.1
-
10
-
-
77951631088
-
A two-locus global DNA barcode for land plants: The coding rbcL gene complements the non-coding trnH-psbA spacer region
-
Kress WJ, Erickson DL (2007) A two-locus global DNA barcode for land plants: the coding rbcL gene complements the non-coding trnH-psbA spacer region. PLoS One 2: e508.
-
(2007)
PLoS One
, vol.2
-
-
Kress, W.J.1
Erickson, D.L.2
-
11
-
-
20444366492
-
Use of DNA barcodes to identify flowering plants
-
Kress WJ, Wurdack KJ, Zimmer EA, Weigt LA, Janzen DH (2005) Use of DNA barcodes to identify flowering plants. Proc Natl Acad Sci U S A 102: 8369-8374.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 8369-8374
-
-
Kress, W.J.1
Wurdack, K.J.2
Zimmer, E.A.3
Weigt, L.A.4
Janzen, D.H.5
-
13
-
-
35348837440
-
Taxonomy. Wanted: A barcode for plants
-
Pennisi E (2007) Taxonomy. Wanted: a barcode for plants. Science 318: 190-191.
-
(2007)
Science
, vol.318
, pp. 190-191
-
-
Pennisi, E.1
-
14
-
-
29244458162
-
Are plant DNA barcodes a search for the Holy Grail?
-
Rubinoff D, Cameron S, Will K (2006a) Are plant DNA barcodes a search for the Holy Grail? Trends Ecol Evol 21: 1-2.
-
(2006)
Trends Ecol Evol
, vol.21
, pp. 1-2
-
-
Rubinoff, D.1
Cameron, S.2
Will, K.3
-
15
-
-
33845914892
-
A genomic perspective on the shortcomings of mitochondrial DNA for ''barcoding'' identification
-
Rubinoff D, Cameron S, Will K (2006b) A genomic perspective on the shortcomings of mitochondrial DNA for ''barcoding'' identification. J Hered 97: 581-594.
-
(2006)
J Hered
, vol.97
, pp. 581-594
-
-
Rubinoff, D.1
Cameron, S.2
Will, K.3
-
16
-
-
1642297400
-
Myth of the molecule:DNA barcode for species cannot replace morphology for identification and classification
-
Will KW, Rubinoff D (2004) Myth of the molecule:DNA barcode for species cannot replace morphology for identification and classification. Cladistics 20: 47-55.
-
(2004)
Cladistics
, vol.20
, pp. 47-55
-
-
Will, K.W.1
Rubinoff, D.2
-
18
-
-
37349085210
-
Character-based DNA barcoding allows discrimination of genera, species and populations in Odonata
-
Rach J, Desalle R, Sarkar IN, Schierwater B, Hadrys H (2008) Character-based DNA barcoding allows discrimination of genera, species and populations in Odonata. Proc Biol Sci 275: 237-247.
-
(2008)
Proc Biol Sci
, vol.275
, pp. 237-247
-
-
Rach, J.1
Desalle, R.2
Sarkar, I.N.3
Schierwater, B.4
Hadrys, H.5
-
19
-
-
0036379159
-
An automated phylogenetic key for classifying homeoboxes
-
Sarkar IN, Thornton JW, Planet PJ, Figurski DH, Schierwater B, et al. (2002) An automated phylogenetic key for classifying homeoboxes. Mol Phylogenet Evol 24: 388-399.
-
(2002)
Mol Phylogenet Evol
, vol.24
, pp. 388-399
-
-
Sarkar, I.N.1
Thornton, J.W.2
Planet, P.J.3
Figurski, D.H.4
Schierwater, B.5
-
20
-
-
0032173634
-
Global dinucleotide signatures and analysis of genomic heterogeneity
-
Karlin S (1998) Global dinucleotide signatures and analysis of genomic heterogeneity. Curr Opin Microbiol 1: 598-610.
-
(1998)
Curr Opin Microbiol
, vol.1
, pp. 598-610
-
-
Karlin, S.1
-
21
-
-
0029060923
-
Dinucleotide relative abundance extremes: A genomic signature
-
Karlin S, Burge C (1995) Dinucleotide relative abundance extremes: a genomic signature. Trends Genet 11: 283-290.
-
(1995)
Trends Genet
, vol.11
, pp. 283-290
-
-
Karlin, S.1
Burge, C.2
-
22
-
-
0032426005
-
Comparative DNA analysis across diverse genomes
-
Karlin S, Campbell AM, Mrazek J (1998) Comparative DNA analysis across diverse genomes. Annu Rev Genet 32: 185-225.
-
(1998)
Annu Rev Genet
, vol.32
, pp. 185-225
-
-
Karlin, S.1
Campbell, A.M.2
Mrazek, J.3
-
23
-
-
0028606501
-
Comparisons of eukaryotic genomic sequences
-
Karlin S, Ladunga I (1994) Comparisons of eukaryotic genomic sequences. Proc Natl Acad Sci U S A 91: 12832-12836.
-
(1994)
Proc Natl Acad Sci U S A
, vol.91
, pp. 12832-12836
-
-
Karlin, S.1
Ladunga, I.2
-
24
-
-
0031591443
-
Differences in dinucleotide frequencies of human, yeast, and Escherichia coli genes
-
Nakashima H, Nishikawa K, Ooi T (1997) Differences in dinucleotide frequencies of human, yeast, and Escherichia coli genes. DNA Res 4: 185-192.
-
(1997)
DNA Res
, vol.4
, pp. 185-192
-
-
Nakashima, H.1
Nishikawa, K.2
Ooi, T.3
-
25
-
-
0032582395
-
Genes from nine genomes are separated into their organisms in the dinucleotide composition space
-
Nakashima H, Ota M, Nishikawa K, Ooi T (1998) Genes from nine genomes are separated into their organisms in the dinucleotide composition space. DNA Res 5: 251-259.
-
(1998)
DNA Res
, vol.5
, pp. 251-259
-
-
Nakashima, H.1
Ota, M.2
Nishikawa, K.3
Ooi, T.4
-
26
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
27
-
-
34547781750
-
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
-
Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 24: 1596-1599.
-
(2007)
Mol Biol Evol
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
28
-
-
65349170124
-
Identifying sharks with DNA barcodes: Assessing the utility of a nucleotide diagnostic approach
-
Wong EHK, Shivji MS, Hanner RH (2009) Identifying sharks with DNA barcodes: assessing the utility of a nucleotide diagnostic approach. Mol Ecol Notes 9: 243-256.
-
(2009)
Mol Ecol Notes
, vol.9
, pp. 243-256
-
-
Wong, E.H.K.1
Shivji, M.S.2
Hanner, R.H.3
-
29
-
-
0242500968
-
Informatics for unveiling hidden genome signatures
-
Abe T, Kanaya S, Kinouchi M, Ichiba Y, Kozuki T, et al. (2003) Informatics for unveiling hidden genome signatures. Genome Res 13: 693-702.
-
(2003)
Genome Res
, vol.13
, pp. 693-702
-
-
Abe, T.1
Kanaya, S.2
Kinouchi, M.3
Ichiba, Y.4
Kozuki, T.5
-
30
-
-
1842332701
-
Compositional biases of bacterial genomes and evolutionary implications
-
Karlin S, Mrazek J, Campbell AM (1997) Compositional biases of bacterial genomes and evolutionary implications. J Bacteriol 179: 3899-3913.
-
(1997)
J Bacteriol
, vol.179
, pp. 3899-3913
-
-
Karlin, S.1
Mrazek, J.2
Campbell, A.M.3
-
31
-
-
0033529862
-
Genome signature comparisons among prokaryote, plasmid, and mitochondrial DNA
-
Campbell A, Mrazek J, Karlin S (1999) Genome signature comparisons among prokaryote, plasmid, and mitochondrial DNA. Proc Natl Acad Sci U S A 96: 9184-9189.
-
(1999)
Proc Natl Acad Sci U S A
, vol.96
, pp. 9184-9189
-
-
Campbell, A.1
Mrazek, J.2
Karlin, S.3
-
32
-
-
67349084049
-
Estimation of bacterial species phylogeny through oligonucleotide frequency distances
-
Takahashi M, Kryukov K, Saitou N (2009) Estimation of bacterial species phylogeny through oligonucleotide frequency distances. Genomics 93: 525-533.
-
(2009)
Genomics
, vol.93
, pp. 525-533
-
-
Takahashi, M.1
Kryukov, K.2
Saitou, N.3
-
33
-
-
29144473686
-
DNA barcoding: Error rates based on comprehensive sampling
-
Meyer CP, Paulay G (2005) DNA barcoding: error rates based on comprehensive sampling. PLoS Biol 3: e422.
-
(2005)
PLoS Biol
, vol.3
-
-
Meyer, C.P.1
Paulay, G.2
-
34
-
-
0037296612
-
The intellectual content of taxonomy: A comment on DNA taxonomy
-
Lipscomb D, Platnick N, Wheeler Q (2003) The intellectual content of taxonomy: A comment on DNA taxonomy. Trends Ecol Evol 18: 65-66.
-
(2003)
Trends Ecol Evol
, vol.18
, pp. 65-66
-
-
Lipscomb, D.1
Platnick, N.2
Wheeler, Q.3
-
35
-
-
8844224149
-
DNA barcoding: Promise and pitfalls
-
Moritz C, Cicero C (2004) DNA barcoding: promise and pitfalls. PLoS Biol 2: e354.
-
(2004)
PLoS Biol
, vol.2
-
-
Moritz, C.1
Cicero, C.2
-
36
-
-
0036682195
-
DNA points the way ahead in taxonomy
-
Tautz D, Arctander P, Minelli A, Thomas RH, Vogler AP (2002) DNA points the way ahead in taxonomy. Nature 418: 479.
-
(2002)
Nature
, vol.418
, pp. 479
-
-
Tautz, D.1
Arctander, P.2
Minelli, A.3
Thomas, R.H.4
Vogler, A.P.5
-
38
-
-
0037286419
-
Stochasticity overrules the ''three-times rule'': Genetic drift, genetic draft, and coalescence times for nuclear loci versus mitochondrial DNA
-
Hudson RR, Turelli M (2003) Stochasticity overrules the ''three-times rule'': genetic drift, genetic draft, and coalescence times for nuclear loci versus mitochondrial DNA. Evolution 57: 182-190.
-
(2003)
Evolution
, vol.57
, pp. 182-190
-
-
Hudson, R.R.1
Turelli, M.2
-
39
-
-
0037565090
-
The causes of phylogenetic conflict in a classic Drosophila species group
-
Machado CA, Hey J (2003) The causes of phylogenetic conflict in a classic Drosophila species group. Proc Biol Sci 270: 1193-1202.
-
(2003)
Proc Biol Sci
, vol.270
, pp. 1193-1202
-
-
Machado, C.A.1
Hey, J.2
-
40
-
-
0002760127
-
Species concept and definition
-
. In: Mayr E. Washington,DC: American association for the advancement of science
-
Mayr E (1957) Species concept and definition. In: Mayr E. The species problem. Washington,DC: American association for the advancement of science. pp 1-23.
-
(1957)
The Species Problem
, pp. 1-23
-
-
Mayr, E.1
-
41
-
-
33751324390
-
A minimalist barcode can identify a specimen whose DNA is degraded
-
Hajibabaei M, Smith A, Janzen DH, Jrodriguez JJ, Whitfield JB, et al. (2006) A minimalist barcode can identify a specimen whose DNA is degraded. Mol Ecol Notes 6: 959-964.
-
(2006)
Mol Ecol Notes
, vol.6
, pp. 959-964
-
-
Hajibabaei, M.1
Smith, A.2
Janzen, D.H.3
Jrodriguez, J.J.4
Whitfield, J.B.5
-
42
-
-
44449171351
-
A universal DNA mini-barcode for biodiversity analysis
-
Meusnier I, Singer GA, Landry JF, Hickey DA, Hebert PD, et al. (2008) A universal DNA mini-barcode for biodiversity analysis. BMC Genomics 9: 214.
-
(2008)
BMC Genomics
, vol.9
, pp. 214
-
-
Meusnier, I.1
Singer, G.A.2
Landry, J.F.3
Hickey, D.A.4
Hebert, P.D.5
-
43
-
-
33845668492
-
Identifying Canadian mosquito species through DNA barcodes
-
Cywinska A, Hunter FF, Hebert PD (2006) Identifying Canadian mosquito species through DNA barcodes. Med Vet Entomol 20: 413-424.
-
(2006)
Med Vet Entomol
, vol.20
, pp. 413-424
-
-
Cywinska, A.1
Hunter, F.F.2
Hebert, P.D.3
-
44
-
-
34247236615
-
Prospects for fungus identification using CO1 DNA barcodes, with Penicillium as a test case
-
Seifert KA, Samson RA, Dewaard JR, Houbraken J, Levesque CA, et al. (2007) Prospects for fungus identification using CO1 DNA barcodes, with Penicillium as a test case. Proc Natl Acad Sci U S A 104: 3901-3906.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 3901-3906
-
-
Seifert, K.A.1
Samson, R.A.2
Dewaard, J.R.3
Houbraken, J.4
Levesque, C.A.5
-
45
-
-
41749086468
-
Single mitochondrial gene barcodes reliably identify sister-species in diverse clades of birds
-
Tavares ES, Baker AJ (2008) Single mitochondrial gene barcodes reliably identify sister-species in diverse clades of birds. BMC Evol Biol 8: 81.
-
(2008)
BMC Evol Biol
, vol.8
, pp. 81
-
-
Tavares, E.S.1
Baker, A.J.2
-
46
-
-
43949083364
-
DNA barcoding in surveys of small mammal communities: A field study in Suriname
-
Borisenko AV, Lim BK, Ivanova NV, Hanner RH, Hebert PDN (2008) DNA barcoding in surveys of small mammal communities: a field study in Suriname. Mol Ecol Notes 8: 471-479.
-
(2008)
Mol Ecol Notes
, vol.8
, pp. 471-479
-
-
Borisenko, A.V.1
Lim, B.K.2
Ivanova, N.V.3
Hanner, R.H.4
Hebert, P.D.N.5
|