Field effect regulation of DNA translocation through a nanopore

Analytical Chemistry

Volumn 82, Issue 19, 2010, Pages 8217-8225

  Ai, Ye ^a   Liu, Jing ^b   Zhang, Bingkai ^b   Qian, Shizhi ^a,c  

^a Old Dominion University   (United States)

^b HUAZHONG UNIVERSITY OF SCIENCE AND TECHNOLOGY   (China)

^c Yeungnam University   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

APPLIED ELECTRIC FIELD; CONTINUUM MODEL; DNA NANOPARTICLES; DNA SEQUENCING; DNA TRANSLOCATION; ELECTRICAL DOUBLE LAYERS; ELECTROOSMOTIC FLOW; ELECTROSTATIC INTERACTIONS; FIELD EFFECTS; FLOATING GATES; GATE ELECTRODES; HYDRODYNAMIC FIELD; MASS TRANSPORT; NEGATIVE GATE; ORDER OF MAGNITUDE; POISSON-NERNST-PLANCK EQUATIONS;

CONTINUUM MECHANICS; DNA; ELECTRIC FIELDS; ELECTRIC PROPERTIES; ELECTROOSMOSIS; ELECTROSTATIC SEPARATORS; NANOPARTICLES; NANOPORES; NAVIER STOKES EQUATIONS;

GENE ENCODING;

DNA; NANOPARTICLE;

ARTICLE; CHEMISTRY; DNA SEQUENCE; ELECTRODE; ELECTROOSMOSIS; HYDRODYNAMICS; ION TRANSPORT; METHODOLOGY; NANOPORE; STATIC ELECTRICITY;

DNA; ELECTRODES; ELECTROOSMOSIS; HYDRODYNAMICS; ION TRANSPORT; NANOPARTICLES; NANOPORES; SEQUENCE ANALYSIS, DNA; STATIC ELECTRICITY;

EID: 77957322357     PISSN: 00032700     EISSN: None     Source Type: Journal    
DOI: 10.1021/ac101628e     Document Type: Article

References (55)

1. Luria, S. E. Science 1989, 246, 873-873
2. Mukhopadhyay, R. Anal. Chem. 2009, 81, 1736-1740
3. Meller, A., Nivon, L., and Branton, D. Phys. Rev. Lett. 2001, 86, 3435-3438
4. Saleh, O. A. and Sohn, L. L. Nano Lett. 2003, 3, 37-38
5. Storm, A. J., Storm, C., Chen, J. H., Zandbergen, H., Joanny, J. F., and Dekker, C. Nano Lett. 2005, 5, 1193-1197
6. Rhee, M. and Burns, M. A. Trends Biotechnol. 2006, 24, 580-586
7. Healy, K., Schiedt, B., and Morrison, A. P. Nanomedicine 2007, 2, 875-897
8. Dekker, C. Nat. Nanotechnol. 2007, 2, 209-215
9. Griffiths, J. Anal. Chem. 2008, 80, 23-27
10. Howorka, S. and Siwy, Z. Chem. Soc. Rev. 2009, 38, 2360-2384
11. Chang, H., Kosari, F., Andreadakis, G., Alam, M. A., Vasmatzis, G., and Bashir, R. Nano Lett. 2004, 4, 1551-1556
12. Heng, J. B., Ho, C., Kim, T., Timp, R., Aksimentiev, A., Grinkova, Y. V., Sligar, S., Schulten, K., and Timp, G. Biophys. J. 2004, 87, 2905-2911
13. Bayley, H. Curr. Opin. Chem. Biol. 2006, 10, 628-637
14. Trepagnier, E. H., Radenovic, A., Sivak, D., Geissler, P., and Liphardt, J. Nano Lett. 2007, 7, 2824-2830
15. Kim, Y. R., Min, J., Lee, I. H., Kim, S., Kim, A. G., Kim, K., Namkoong, K., and Ko, C. Biosens. Bioelectron. 2007, 22, 2926-2931
16. Ghosal, S. Phys. Rev. Lett. 2007, 98, 238104
17. Kawano, R., Schibel, A. E. P., Cauley, C., and White, H. S. Langmuir 2009, 25, 1233-1237
18. Fologea, D., Uplinger, J., Thomas, B., McNabb, D. S., and Li, J. L. Nano Lett. 2005, 5, 1734-1737
19. de Zoysa, R. S. S., Jayawardhana, D. A., Zhao, Q. T., Wang, D. Q., Armstrong, D. W., and Guan, X. Y. J. Phys. Chem. B 2009, 113, 13332-13336
20. Tsutsui, M., Taniguchi, M., and Kawai, T. Nano Lett. 2009, 9, 1659-1662
21. Krems, M., Pershin, Y. V., and Di Ventra, M. Nano Lett. 2010, 10, 2674-2678
22. Feng, J., Liu, J., Wu, B., and Wang, G. Anal. Chem. 2010, 82, 4520-4528
23. Karnik, R., Fan, R., Yue, M., Li, D. Y., Yang, P. D., and Majumdar, A. Nano Lett. 2005, 5, 943-948
24. Kalman, E. B., Sudre, O., Vlassiouk, I., and Siwy, Z. S. Anal. Bioanal. Chem. 2009, 394, 413-419
25. Nam, S. W., Rooks, M. J., Kim, K. B., and Rossnagel, S. M. Nano Lett. 2009, 9, 2044-2048
26. Taniguchi, M., Tsutsui, M., Yokota, K., and Kawai, T. Appl. Phys. Lett. 2009, 95, 123701
27. Joshi, P., Smolyanitsky, A., Petrossian, L., Goryll, M., Saraniti, M., and Thornton, T. J. J. Appl. Phys. 2010, 107 054701
28. Schasfoort, R. B. M., Schlautmann, S., Hendrikse, L., and van den Berg, A. Science 1999, 286, 942-945
29. Vajandar, S. K., Xu, D. Y., Sun, J. S., Markov, D. A., Hofmeister, W. H., and Li, D. Y. J. Microelectromech. Syst. 2009, 18, 1173-1183
30. Daiguji, H. Chem. Soc. Rev. 2010, 39, 901-911
31. Oh, Y. J., Gamble, T. C., Leonhardt, D., Chung, C. H., Brueck, S. R. J., Ivory, C. F., Lopez, G. P., Petsev, D. N., and Han, S. M. Lab Chip 2008, 8, 251-258
32. Oh, Y. J., Garcia, A. L., Petsev, D. N., Lopez, G. P., Brueck, S. R. J., Ivory, C. F., and Han, S. M. Lab Chip 2009, 9, 1601-1608
33. Liu, H., Qian, S., and Bau, H. H. Biophys. J. 2007, 92, 1164-1177
34. White, H. S. and Bund, A. Langmuir 2008, 24, 2212-2218
35. Ai, Y., Zhang, M., Joo, S. W., Cheney, M. A., and Qian, S. J. Phys. Chem. C 2010, 114, 3883-3890
36. Corry, B., Kuyucak, S., and Chung, S. H. Biophys. J. 2000, 78, 2364-2381
37. Stein, D., Kruithof, M., and Dekker, C. Phys. Rev. Lett. 2004, 93 035901
38. Schoch, R. B., van Lintel, H., and Renaud, P. Phys. Fluids 2005, 17, 100604
39. Pennathur, S. and Santiago, J. G. Anal. Chem. 2005, 77, 6782-6789
40. Storm, A. J., Chen, J. H., Zandbergen, H. W., and Dekker, C. Phys. Rev. E 2005, 71 051903
41. Qian, S., Das, B., and Luo, X. B. J. Colloid Interface Sci. 2007, 315, 721-730
42. Qian, S., Joo, S. W., Ai, Y., Cheney, M. A., and Hou, W. S. J. Colloid Interface Sci. 2009, 329, 376-383
43. Qian, S., Wang, A. H., and Afonien, J. K. J. Colloid Interface Sci. 2006, 303, 579-592
44. Qian, S. and Joo, S. W. Langmuir 2008, 24, 4778-4784
45. Qian, S., Joo, S. W., Hou, W., and Zhao, X. Langmuir 2008, 24, 5332-5340
46. Hsu, J. P., Chen, Z. S., and Tseng, S. J. Phys. Chem. B 2009, 113, 7701-7708
47. Hsu, J. P., Hsu, W. L., and Liu, K. L. Langmuir 2010, 26, 8648-8658
48. Ai, Y., Beskok, A., Gauthier, D. T., Joo, S. W., and Qian, S. Biomicrofluidics 2009, 3 044110
49. Ai, Y., Joo, S. W., Jiang, Y., Xuan, X., and Qian, S. Electrophoresis 2009, 30, 2499-2506
50. Ai, Y., Park, S., Zhu, J., Xuan, X., Beskok, A., and Qian, S. Langmuir 2010, 26, 2937-2944
51. Ai, Y., Qian, S., Liu, S., and Joo, S. W. Biomicrofluidics 2010, 4 013201
52. Ai, Y. and Qian, S. J. Colloid Interface Sci. 2010, 346, 448-454
53. Mandelkern, M., Elias, J. G., Eden, D., and Crothers, D. M. J. Mol. Biol. 1981, 152, 153-161
54. Chein, R. Y. and Dutta, P. Colloid Surf., A: Physicochem. Eng. Aspects 2009, 341, 1-12
55. Wanunu, M., Sutin, J., McNally, B., Chow, A., and Meller, A. Biophys. J. 2008, 95, 4716-4725