-
1
-
-
33746581694
-
Mutations in the gene encoding the 3′-5′ DNA exonuclease TREX1 cause Aicardi-Goutieres syndrome at the AGS1 locus
-
Crow,Y.J., Hayward,B.E., Parmar,R., Robins,P., Leitch,A., Ali,M., Black,D.N., van Bokhoven,H., Brunner,H.G., Hamel,B.C. et al. (2006) Mutations in the gene encoding the 3′-5′ DNA exonuclease TREX1 cause Aicardi-Goutieres syndrome at the AGS1 locus. Nat. Genet., 38, 917-920.
-
(2006)
Nat. Genet.
, vol.38
, pp. 917-920
-
-
Crow, Y.J.1
Hayward, B.E.2
Parmar, R.3
Robins, P.4
Leitch, A.5
Ali, M.6
Black, D.N.7
van Bokhoven, H.8
Brunner, H.G.9
Hamel, B.C.10
-
2
-
-
34548327158
-
Mutations in the gene encoding the 3′-5′ DNA exonuclease TREX1 are associated with systemic lupus erythematosus
-
Lee-Kirsch,M.A., Gong,M., Chowdhury,D., Senenko,L., Engel,K., Lee,Y.A., de Silva,U., Bailey,S.L., Witte,T., Vyse,T.J. et al. (2007) Mutations in the gene encoding the 3′-5′ DNA exonuclease TREX1 are associated with systemic lupus erythematosus. Nat. Genet., 39, 1065-1067.
-
(2007)
Nat. Genet.
, vol.39
, pp. 1065-1067
-
-
Lee-Kirsch, M.A.1
Gong, M.2
Chowdhury, D.3
Senenko, L.4
Engel, K.5
Lee, Y.A.6
de Silva, U.7
Bailey, S.L.8
Witte, T.9
Vyse, T.J.10
-
3
-
-
0035131930
-
Alterations of the double-strand break repair gene MRE11 in cancer
-
Fukuda,T., Sumiyoshi,T., Takahashi,M., Kataoka,T., Asahara,T., Inui,H., Watatani,M., Yasutomi,M., Kamada,N. and Miyagawa,K. (2001) Alterations of the double-strand break repair gene MRE11 in cancer. Cancer Res., 61, 23-26.
-
(2001)
Cancer Res.
, vol.61
, pp. 23-26
-
-
Fukuda, T.1
Sumiyoshi, T.2
Takahashi, M.3
Kataoka, T.4
Asahara, T.5
Inui, H.6
Watatani, M.7
Yasutomi, M.8
Kamada, N.9
Miyagawa, K.10
-
4
-
-
0035903140
-
Redundant exonuclease involvement in Escherichia coli methyl-directed mismatch repair
-
Viswanathan,M., Burdett,V., Baitinger,C., Modrich,P. and Lovett,S.T. (2001) Redundant exonuclease involvement in Escherichia coli methyl-directed mismatch repair. J. Biol. Chem., 276, 31053-31058.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 31053-31058
-
-
Viswanathan, M.1
Burdett, V.2
Baitinger, C.3
Modrich, P.4
Lovett, S.T.5
-
5
-
-
0242362736
-
xni-deficient Escherichia coli are proficient for recombination and multiple pathways of repair
-
Lombardo,M.-J., Aponyi,I., Ray,M.P., Sandigursky,M., Franklin,W.A. and Rosenberg,S.M. (2003) xni-deficient Escherichia coli are proficient for recombination and multiple pathways of repair. DNA Repair, 2, 1175-1183.
-
(2003)
DNA Repair
, vol.2
, pp. 1175-1183
-
-
Lombardo, M.-J.1
Aponyi, I.2
Ray, M.P.3
Sandigursky, M.4
Franklin, W.A.5
Rosenberg, S.M.6
-
6
-
-
0035811037
-
In vivo requirement for RecJ, ExoVII, ExoI, and ExoX in methyl-directed mismatch repair
-
Burdett,V., Baitinger,C., Viswanathan,M., Lovett,S.T. and Modrich,P. (2001) In vivo requirement for RecJ, ExoVII, ExoI, and ExoX in methyl-directed mismatch repair. Proc. Natl Acad. Sci. USA, 98, 6765-6770.
-
(2001)
Proc. Natl Acad. Sci. USA
, vol.98
, pp. 6765-6770
-
-
Burdett, V.1
Baitinger, C.2
Viswanathan, M.3
Lovett, S.T.4
Modrich, P.5
-
7
-
-
0020793619
-
Induction of DNA strand breaks in normal human fibroblasts exposed to monochromatic ultraviolet and visible wavelengths in the 240-546 nm range
-
Rosenstein,B.S. and Ducore,J.M. (1983) Induction of DNA strand breaks in normal human fibroblasts exposed to monochromatic ultraviolet and visible wavelengths in the 240-546 nm range. Photochem. Photobiol., 38, 51-55.
-
(1983)
Photochem. Photobiol.
, vol.38
, pp. 51-55
-
-
Rosenstein, B.S.1
Ducore, J.M.2
-
8
-
-
0035695023
-
Recombination at double-strand breaks and DNA ends: conserved mechanisms from phage to humans
-
Cromie,G.A., Connelly,J.C. and Leach,D.R.F. (2001) Recombination at double-strand breaks and DNA ends: conserved mechanisms from phage to humans. Mol. Cell, 8, 1163-1174.
-
(2001)
Mol. Cell
, vol.8
, pp. 1163-1174
-
-
Cromie, G.A.1
Connelly, J.C.2
Leach, D.R.F.3
-
9
-
-
0032530966
-
Domain organization and functional analysis of Thermus thermophilus MutS protein
-
Tachiki,H., Kato,R., Masui,R., Hasegawa,K., Itakura,H., Fukuyama,K. and Kuramitsu,S. (1998) Domain organization and functional analysis of Thermus thermophilus MutS protein. Nucleic Acids Res., 26, 4153-4159.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 4153-4159
-
-
Tachiki, H.1
Kato, R.2
Masui, R.3
Hasegawa, K.4
Itakura, H.5
Fukuyama, K.6
Kuramitsu, S.7
-
11
-
-
33746189409
-
Endonucleolytic function of MutLα in human mismatch repair
-
Kadyrov,F.A., Dzantiev,L., Constantin,N. and Modrich,P. (2006) Endonucleolytic function of MutLα in human mismatch repair. Cell, 126, 297-308.
-
(2006)
Cell
, vol.126
, pp. 297-308
-
-
Kadyrov, F.A.1
Dzantiev, L.2
Constantin, N.3
Modrich, P.4
-
12
-
-
37549047646
-
Saccharomyces cerevisiae MutLa is a mismatch repair endonuclease
-
Kadyrov,F.A., Holmes,S.F., Arana,M.E., Lukianova,O.A., O'Donnell,M., Kunkel,T.A. and Modrich,P. (2007) Saccharomyces cerevisiae MutLa is a mismatch repair endonuclease. J. Biol. Chem., 282, 37181-37190.
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 37181-37190
-
-
Kadyrov, F.A.1
Holmes, S.F.2
Arana, M.E.3
Lukianova, O.A.4
O'Donnell, M.5
Kunkel, T.A.6
Modrich, P.7
-
13
-
-
33750083332
-
Mechanisms in eukaryotic mismatch repair
-
Modrich,P. (2006) Mechanisms in eukaryotic mismatch repair. J. Biol. Chem., 281, 30305-30309.
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 30305-30309
-
-
Modrich, P.1
-
14
-
-
0034641938
-
Crystal structures of mismatch repair protein MutS and its complex with a substrate DNA
-
Obmolova,G., Ban,C., Hsieh,P. and Yang,W. (2000) Crystal structures of mismatch repair protein MutS and its complex with a substrate DNA. Nature, 407, 703-710.
-
(2000)
Nature
, vol.407
, pp. 703-710
-
-
Obmolova, G.1
Ban, C.2
Hsieh, P.3
Yang, W.4
-
15
-
-
45549093251
-
Bound nucleotide controls the endonuclease activity of mismatch repair enzyme MutL
-
Fukui,K., Nishida,M., Nakagawa,N., Masui,R. and Kuramitsu,S. (2008) Bound nucleotide controls the endonuclease activity of mismatch repair enzyme MutL. J. Biol. Chem., 283, 12136-12145.
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 12136-12145
-
-
Fukui, K.1
Nishida, M.2
Nakagawa, N.3
Masui, R.4
Kuramitsu, S.5
-
16
-
-
59649084642
-
Structures of endonuclease V with DNA reveal initiation of deaminated adenine repair
-
Dalhus,B., Arvai,A.S., Rosnes,I., Olsen,O.E., Backe,P.H., Alseth,I., Gao,H., Cao,W., Tainer,J.A. and Bjoras,M. (2009) Structures of endonuclease V with DNA reveal initiation of deaminated adenine repair. Nat. Struct. Mol. Biol., 16, 138-143.
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 138-143
-
-
Dalhus, B.1
Arvai, A.S.2
Rosnes, I.3
Olsen, O.E.4
Backe, P.H.5
Alseth, I.6
Gao, H.7
Cao, W.8
Tainer, J.A.9
Bjoras, M.10
-
17
-
-
0242380643
-
Incision at hypoxanthine residues in DNA by a mammalian homologue of the Escherichia coli antimutator enzyme endonuclease V
-
Moe,A., Ringvoll,J., Nordstrand,L.M., Eide,L., Bjoras,M., Seeberg,E., Rognes,T. and Klungland,A. (2003) Incision at hypoxanthine residues in DNA by a mammalian homologue of the Escherichia coli antimutator enzyme endonuclease V. Nucleic Acids Res., 31, 3893-3900.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3893-3900
-
-
Moe, A.1
Ringvoll, J.2
Nordstrand, L.M.3
Eide, L.4
Bjoras, M.5
Seeberg, E.6
Rognes, T.7
Klungland, A.8
-
18
-
-
0033762813
-
Structural genomics projects in Japan
-
Yokoyama,S., Hirota,H., Kigawa,T., Yabuki,T., Shirouzu,M., Terada,T., Ito,Y., Matsuo,Y., Kuroda,Y., Nishimura,Y. et al. (2000) Structural genomics projects in Japan. Nat. Struct. Biol., 7, 943-945.
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 943-945
-
-
Yokoyama, S.1
Hirota, H.2
Kigawa, T.3
Yabuki, T.4
Shirouzu, M.5
Terada, T.6
Ito, Y.7
Matsuo, Y.8
Kuroda, Y.9
Nishimura, Y.10
-
19
-
-
1942488240
-
Thermus thermophilus MutS2, a MutS paralogue, possesses an endonuclease activity promoted by MutL
-
Fukui,K., Masui,R. and Kuramitsu,S. (2004) Thermus thermophilus MutS2, a MutS paralogue, possesses an endonuclease activity promoted by MutL. J. Biochem., 135, 375-384.
-
(2004)
J. Biochem.
, vol.135
, pp. 375-384
-
-
Fukui, K.1
Masui, R.2
Kuramitsu, S.3
-
20
-
-
48749122761
-
6-methylguanine-DNA methyltransferase-like protein from Thermus thermophilus interacts with a nucleotide excision repair protein
-
6-methylguanine-DNA methyltransferase-like protein from Thermus thermophilus interacts with a nucleotide excision repair protein. J. Biochem., 144, 267-277.
-
(2008)
J. Biochem.
, vol.144
, pp. 267-277
-
-
Morita, R.1
Nakagawa, N.2
Kuramitsu, S.3
Masui, R.4
-
21
-
-
0035890855
-
Overexpression, purification and characterization of RecJ protein from Thermus thermophilus HB8 and its core domain
-
Yamagata,A., Masui,R., Kakuta,Y., Kuramitsu,S. and Fukuyama,K. (2001) Overexpression, purification and characterization of RecJ protein from Thermus thermophilus HB8 and its core domain. Nucleic Acids Res., 29, 4617-4624.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 4617-4624
-
-
Yamagata, A.1
Masui, R.2
Kakuta, Y.3
Kuramitsu, S.4
Fukuyama, K.5
-
22
-
-
0031924593
-
Oligoribonuclease is encoded by a highly conserved gene in the 3′-5′ exonuclease superfamily
-
Zhang,X., Zhu,L. and Deutscher,M.P. (1998) Oligoribonuclease is encoded by a highly conserved gene in the 3′-5′ exonuclease superfamily. J. Bacteriol., 180, 2779-2781.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 2779-2781
-
-
Zhang, X.1
Zhu, L.2
Deutscher, M.P.3
-
23
-
-
0031574363
-
The proofreading domain of Escherichia coli DNA polymerase I and other DNA and/or RNA exonuclease domains
-
Moser,M.J., Holley,W.R., Chatterjee,A. and Mian,I.S. (1997) The proofreading domain of Escherichia coli DNA polymerase I and other DNA and/or RNA exonuclease domains. Nucleic Acids Res., 25, 5110-5118.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 5110-5118
-
-
Moser, M.J.1
Holley, W.R.2
Chatterjee, A.3
Mian, I.S.4
-
24
-
-
0024474078
-
A conserved 3′->5′ exonuclease active site in prokaryotic and eukaryotic DNA polymerases
-
Bernad,A., Blanco,L., Lazaro,J., Martin,G. and Salas,M. (1989) A conserved 3′->5′ exonuclease active site in prokaryotic and eukaryotic DNA polymerases. Cell, 59, 219-228.
-
(1989)
Cell
, vol.59
, pp. 219-228
-
-
Bernad, A.1
Blanco, L.2
Lazaro, J.3
Martin, G.4
Salas, M.5
-
25
-
-
0033664281
-
Structure of Escherichia coli exonuclease I suggests how processivity is achieved
-
Breyer,W.A. and Matthews,B.W. (2000) Structure of Escherichia coli exonuclease I suggests how processivity is achieved. Nat. Struct. Mol. Biol., 7, 1125-1128.
-
(2000)
Nat. Struct. Mol. Biol.
, vol.7
, pp. 1125-1128
-
-
Breyer, W.A.1
Matthews, B.W.2
-
26
-
-
38549126059
-
Structure of Escherichia coli exonuclease I in complex with thymidine 5′-monophosphate
-
Busam,R. (2008) Structure of Escherichia coli exonuclease I in complex with thymidine 5′-monophosphate. Acta Crystallogr. D Biol. Crystallogr., 64, 206-210.
-
(2008)
Acta Crystallogr. D Biol. Crystallogr.
, vol.64
, pp. 206-210
-
-
Busam, R.1
-
27
-
-
34248359835
-
Transcription activation mediated by a cyclic AMP receptor protein from Thermus thermophilus HB8
-
Shinkai,A., Kira,S., Nakagawa,N., Kashihara,A., Kuramitsu,S. and Yokoyama,S. (2007) Transcription activation mediated by a cyclic AMP receptor protein from Thermus thermophilus HB8. J. Bacteriol., 189, 3891-3901.
-
(2007)
J. Bacteriol.
, vol.189
, pp. 3891-3901
-
-
Shinkai, A.1
Kira, S.2
Nakagawa, N.3
Kashihara, A.4
Kuramitsu, S.5
Yokoyama, S.6
-
28
-
-
33846880929
-
Validation of universal conditions for duplex quantitative reverse transcription polymerase chain reaction assays
-
Ishii,T., Sootome,H., Shan,L. and Yamashita,K. (2007) Validation of universal conditions for duplex quantitative reverse transcription polymerase chain reaction assays. Anal. Biochem., 362, 201-212.
-
(2007)
Anal. Biochem.
, vol.362
, pp. 201-212
-
-
Ishii, T.1
Sootome, H.2
Shan, L.3
Yamashita, K.4
-
29
-
-
0035850879
-
Disruption of Thermus thermophilus genes by homologous recombination using a thermostable kanamycin-resistant marker
-
Hashimoto,Y., Yano,T., Kuramitsu,S. and Kagamiyama,H. (2001) Disruption of Thermus thermophilus genes by homologous recombination using a thermostable kanamycin-resistant marker. FEBS Lett., 506, 231-234.
-
(2001)
FEBS Lett.
, vol.506
, pp. 231-234
-
-
Hashimoto, Y.1
Yano, T.2
Kuramitsu, S.3
Kagamiyama, H.4
-
30
-
-
0032730861
-
Directed evolution of thermostable kanamycin-resistance gene: a convenient selection marker for Thermus thermophilus
-
Hoseki,J., Yano,T., Koyama,Y., Kuramitsu,S. and Kagamiyama,H. (1999) Directed evolution of thermostable kanamycin-resistance gene: a convenient selection marker for Thermus thermophilus. J. Biochem., 126, 951-956.
-
(1999)
J. Biochem.
, vol.126
, pp. 951-956
-
-
Hoseki, J.1
Yano, T.2
Koyama, Y.3
Kuramitsu, S.4
Kagamiyama, H.5
-
31
-
-
67650136762
-
Degradation of ppGpp by nudix pyrophosphatase modulates the transition of growth phase in the bacterium Thermus thermophilus
-
Ooga,T., Ohashi,Y., Kuramitsu,S., Koyama,Y., Tomita,M., Soga,T. and Masui,R. (2009) Degradation of ppGpp by nudix pyrophosphatase modulates the transition of growth phase in the bacterium Thermus thermophilus. J. Biol. Chem., 284, 15549-15556.
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 15549-15556
-
-
Ooga, T.1
Ohashi, Y.2
Kuramitsu, S.3
Koyama, Y.4
Tomita, M.5
Soga, T.6
Masui, R.7
-
32
-
-
0001641514
-
Mutations of bacteria from virus sensitivity to virus resistance
-
Luria,S.E. and Delbruck,M. (1943) Mutations of bacteria from virus sensitivity to virus resistance. Genetics, 28, 491-511.
-
(1943)
Genetics
, vol.28
, pp. 491-511
-
-
Luria, S.E.1
Delbruck, M.2
-
33
-
-
44849110325
-
Mass spectrometric characterization of proteins modified by nitric oxide-derived species
-
Salzano,A.M., D'Ambrosio,C. and Scaloni,A. (2008) Mass spectrometric characterization of proteins modified by nitric oxide-derived species. Meth. Enzymol., 440, 3-15.
-
(2008)
Meth. Enzymol.
, vol.440
, pp. 3-15
-
-
Salzano, A.M.1
D'Ambrosio, C.2
Scaloni, A.3
-
34
-
-
34548563856
-
Analysis of a nuclease activity of catalytic domain of Thermus thermophilus MutS2 by high-accuracy mass spectrometry
-
Fukui,K., Takahata,Y., Nakagawa,N., Kuramitsu,S. and Masui,R. (2007) Analysis of a nuclease activity of catalytic domain of Thermus thermophilus MutS2 by high-accuracy mass spectrometry. Nucleic Acids Res., 35, e100.
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Fukui, K.1
Takahata, Y.2
Nakagawa, N.3
Kuramitsu, S.4
Masui, R.5
-
35
-
-
58549101083
-
Orchestration of Haemophilus influenzae RecJ exonuclease by interaction with single-stranded DNA-binding protein
-
Sharma,R. and Rao,D.N. (2009) Orchestration of Haemophilus influenzae RecJ exonuclease by interaction with single-stranded DNA-binding protein. J. Mol. Biol., 385, 1375-1396.
-
(2009)
J. Mol. Biol.
, vol.385
, pp. 1375-1396
-
-
Sharma, R.1
Rao, D.N.2
-
36
-
-
52049118325
-
Cooperative DNA binding and communication across the dimer interface in the TREX2 3′ -> 5′-exonuclease
-
Perrino,F.W., de Silva,U., Harvey,S., Pryor,E.E. Jr, Cole,D.W. and Hollis,T. (2008) Cooperative DNA binding and communication across the dimer interface in the TREX2 3′ -> 5′-exonuclease. J. Biol. Chem., 283, 21441-21452.
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 21441-21452
-
-
Perrino, F.W.1
de Silva, U.2
Harvey, S.3
Pryor E.E., Jr.4
Cole, D.W.5
Hollis, T.6
-
37
-
-
0033570183
-
Exonuclease X of Escherichia coli. A novel 3′-5′ DNase and DnaQ superfamily member involved in DNA repair
-
Viswanathan,M. and Lovett,S.T. (1999) Exonuclease X of Escherichia coli. A novel 3′-5′ DNase and DnaQ superfamily member involved in DNA repair. J. Biol. Chem., 274, 30094-30100.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 30094-30100
-
-
Viswanathan, M.1
Lovett, S.T.2
-
38
-
-
0001063349
-
The deoxyribonucleases of Escherichia coli
-
Lehman,I.R. and Nussbaum,A.L. (1964) The deoxyribonucleases of Escherichia coli. J. Biol. Chem., 239, 2628-2636.
-
(1964)
J. Biol. Chem.
, vol.239
, pp. 2628-2636
-
-
Lehman, I.R.1
Nussbaum, A.L.2
-
39
-
-
0023689711
-
A mutation in the 530 loop of Escherichia coli 16S ribosomal RNA causes resistance to streptomycin
-
Melancon,P., Lemieux,C. and Brakier-Gingras,L. (1988) A mutation in the 530 loop of Escherichia coli 16S ribosomal RNA causes resistance to streptomycin. Nucleic Acids Res., 16, 9631-9639.
-
(1988)
Nucleic Acids Res.
, vol.16
, pp. 9631-9639
-
-
Melancon, P.1
Lemieux, C.2
Brakier-Gingras, L.3
-
40
-
-
0023238983
-
Interaction of antibiotics with functional sites in 16S ribosomal RNA
-
Moazed,D. and Noller,H.F. (1987) Interaction of antibiotics with functional sites in 16S ribosomal RNA. Nature, 327, 389-394.
-
(1987)
Nature
, vol.327
, pp. 389-394
-
-
Moazed, D.1
Noller, H.F.2
-
41
-
-
0019783890
-
Double-strand breaks in DNA caused by repair of damage due to ultraviolet light
-
Bradley,M.O. (1981) Double-strand breaks in DNA caused by repair of damage due to ultraviolet light. J. Supramol. Struct. Cell. Biochem., 16, 337-343.
-
(1981)
J. Supramol. Struct. Cell. Biochem.
, vol.16
, pp. 337-343
-
-
Bradley, M.O.1
-
42
-
-
0022629164
-
The role of the (6-4) photoproduct in ultraviolet light-induced transition mutations in E. coli
-
Franklin,W.A. and Haseltine,W.A. (1986) The role of the (6-4) photoproduct in ultraviolet light-induced transition mutations in E. coli. Mutat. Res., 165, 1-7.
-
(1986)
Mutat. Res.
, vol.165
, pp. 1-7
-
-
Franklin, W.A.1
Haseltine, W.A.2
-
43
-
-
0024584032
-
Enzymatic analysis of isomeric trithymidylates containing ultraviolet light-induced cyclobutane pyrimidine dimers. II. Phosphorylation by phage T4 polynucleotide kinase
-
Weinfeld,M., Liuzzi,M. and Paterson,M.C. (1989) Enzymatic analysis of isomeric trithymidylates containing ultraviolet light-induced cyclobutane pyrimidine dimers. II. Phosphorylation by phage T4 polynucleotide kinase. J. Biol. Chem., 264, 6364-6370.
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 6364-6370
-
-
Weinfeld, M.1
Liuzzi, M.2
Paterson, M.C.3
-
44
-
-
0024439327
-
Respective roles of pyrimidine dimer and pyrimidine (6-4) pyrimidone photoproducts in UV mutagenesis of simian virus 40 DNA in mammalian cells
-
Bourre,F., Benoit,A. and Sarasin,A. (1989) Respective roles of pyrimidine dimer and pyrimidine (6-4) pyrimidone photoproducts in UV mutagenesis of simian virus 40 DNA in mammalian cells. J. Virol., 63, 4520-4524.
-
(1989)
J. Virol.
, vol.63
, pp. 4520-4524
-
-
Bourre, F.1
Benoit, A.2
Sarasin, A.3
-
45
-
-
0016424156
-
Enzymatic production of deoxyribonucleic acid double-strand breaks after ultraviolet irradiation of Escherichia coli K-12
-
Bonura,T. and Smith,K.C. (1975) Enzymatic production of deoxyribonucleic acid double-strand breaks after ultraviolet irradiation of Escherichia coli K-12. J. Bacteriol., 121, 511-517.
-
(1975)
J. Bacteriol.
, vol.121
, pp. 511-517
-
-
Bonura, T.1
Smith, K.C.2
-
46
-
-
31344469053
-
Evidence for mutagenesis by nitric oxide during nitrate metabolism in Escherichia coli
-
Weiss,B. (2006) Evidence for mutagenesis by nitric oxide during nitrate metabolism in Escherichia coli. J. Bacteriol., 188, 829-833.
-
(2006)
J. Bacteriol.
, vol.188
, pp. 829-833
-
-
Weiss, B.1
-
47
-
-
0036256934
-
Oxidative deamination by hydrogen peroxide in the presence of metals
-
Akagawa,M. and Suyama,K. (2002) Oxidative deamination by hydrogen peroxide in the presence of metals. Free Radic. Res., 36, 13-21.
-
(2002)
Free Radic. Res.
, vol.36
, pp. 13-21
-
-
Akagawa, M.1
Suyama, K.2
-
48
-
-
40349106220
-
Insights into different dependency of dNTP triphosphohydrolase on metal ion species from intracellular ion concentrations in Thermus thermophilus
-
Kondo,N., Nishikubo,T., Wakamatsu,T., Ishikawa,H., Nakagawa,N., Kuramitsu,S. and Masui,R. (2008) Insights into different dependency of dNTP triphosphohydrolase on metal ion species from intracellular ion concentrations in Thermus thermophilus. Extremophiles, 12, 217-223.
-
(2008)
Extremophiles
, vol.12
, pp. 217-223
-
-
Kondo, N.1
Nishikubo, T.2
Wakamatsu, T.3
Ishikawa, H.4
Nakagawa, N.5
Kuramitsu, S.6
Masui, R.7
-
49
-
-
0004228157
-
-
American Society for Microbiology, Washington, DC
-
Friedberg,E.C., Walker,G.C. and Siede,W. (1995) DNA Repair and Mutagenesis. American Society for Microbiology, Washington, DC.
-
(1995)
DNA Repair and Mutagenesis
-
-
Friedberg, E.C.1
Walker, G.C.2
Siede, W.3
-
50
-
-
17644407757
-
The human TREX2 3′ -> 5′-exonuclease structure suggests a mechanism for efficient nonprocessive DNA catalysis
-
Perrino,F.W., Harvey,S., McMillin,S. and Hollis,T. (2005) The human TREX2 3′ -> 5′-exonuclease structure suggests a mechanism for efficient nonprocessive DNA catalysis. J. Biol. Chem., 280, 15212-15218.
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 15212-15218
-
-
Perrino, F.W.1
Harvey, S.2
McMillin, S.3
Hollis, T.4
-
51
-
-
34249848019
-
The crystal structure of TREX1 explains the 3′ nucleotide specificity and reveals a polyproline II helix for protein partnering
-
de Silva,U., Choudhury,S., Bailey,S.L., Harvey,S., Perrino,F.W. and Hollis,T. (2007) The crystal structure of TREX1 explains the 3′ nucleotide specificity and reveals a polyproline II helix for protein partnering. J. Biol. Chem., 282, 10537-10543.
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 10537-10543
-
-
de Silva, U.1
Choudhury, S.2
Bailey, S.L.3
Harvey, S.4
Perrino, F.W.5
Hollis, T.6
-
52
-
-
65549101461
-
DNA binding induces active site conformational change in the human TREX2 3′-exonuclease
-
de Silva,U., Perrino,F.W. and Hollis,T. (2009) DNA binding induces active site conformational change in the human TREX2 3′-exonuclease. Nucleic Acids Res., 37, 2411-2417.
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 2411-2417
-
-
de Silva, U.1
Perrino, F.W.2
Hollis, T.3
-
53
-
-
0000656815
-
The deoxyribonucleases of Escherichia coli
-
Lehman,I.R. (1960) The deoxyribonucleases of Escherichia coli. J. Biol. Chem., 235, 1479-1487.
-
(1960)
J. Biol. Chem.
, vol.235
, pp. 1479-1487
-
-
Lehman, I.R.1
-
54
-
-
0033951831
-
AP lyases and dRPases: commonality of mechanism
-
Piersen,C.E., McCullough,A.K. and Lloyd,R.S. (2000) AP lyases and dRPases: commonality of mechanism. Mutat. Res., 459, 43-53.
-
(2000)
Mutat. Res.
, vol.459
, pp. 43-53
-
-
Piersen, C.E.1
McCullough, A.K.2
Lloyd, R.S.3
-
55
-
-
0028217623
-
Escherichia coli single-stranded DNA binding protein stimulates the DNA deoxyribophosphodiesterase activity of exonuclease I
-
Sandigursky,M. and Franklin,W.A. (1994) Escherichia coli single-stranded DNA binding protein stimulates the DNA deoxyribophosphodiesterase activity of exonuclease I. Nucleic Acids Res., 22, 247-250.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 247-250
-
-
Sandigursky, M.1
Franklin, W.A.2
-
56
-
-
0026669836
-
DNA deoxyribophosphodiesterase of Escherichia coli is associated with exonuclease I
-
Sandigursky,M. and Franklin,W.A. (1992) DNA deoxyribophosphodiesterase of Escherichia coli is associated with exonuclease I. Nucleic Acids Res., 20, 4699-4703.
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 4699-4703
-
-
Sandigursky, M.1
Franklin, W.A.2
-
57
-
-
13444301391
-
Contact with host cells induces a DNA repair system in pathogenic Neisseriae
-
Morelle,S., Carbonnelle,E., Matic,I. and Nassif,X. (2005) Contact with host cells induces a DNA repair system in pathogenic Neisseriae. Mol. Microbiol., 55, 853-861.
-
(2005)
Mol. Microbiol.
, vol.55
, pp. 853-861
-
-
Morelle, S.1
Carbonnelle, E.2
Matic, I.3
Nassif, X.4
-
58
-
-
33644862908
-
RecJ exonuclease: substrates, products and interaction with SSB
-
Han,E.S., Cooper,D.L., Persky,N.S., Sutera,V.A. Jr, Whitaker,R.D., Montello,M.L. and Lovett,S.T. (2006) RecJ exonuclease: substrates, products and interaction with SSB. Nucleic Acids Res., 34, 1084-1091.
-
(2006)
Nucleic Acids Res.
, vol.34
, pp. 1084-1091
-
-
Han, E.S.1
Cooper, D.L.2
Persky, N.S.3
Sutera V.A., Jr.4
Whitaker, R.D.5
Montello, M.L.6
Lovett, S.T.7
-
59
-
-
0029929392
-
Protein-protein interactions between the Escherichia coli single-stranded DNA-binding protein and exonuclease I
-
Sandigursky,M., Mendez,F., Bases,R.E., Matsumoto,T. and Franklin,W.A. (1996) Protein-protein interactions between the Escherichia coli single-stranded DNA-binding protein and exonuclease I. Radiat. Res., 145, 619-623.
-
(1996)
Radiat. Res.
, vol.145
, pp. 619-623
-
-
Sandigursky, M.1
Mendez, F.2
Bases, R.E.3
Matsumoto, T.4
Franklin, W.A.5
-
60
-
-
33746522319
-
A distinct TthMutY bifunctional glycosylase that hydrolyzes not only adenine but also thymine opposite 8-oxoguanine in the hyperthermophilic bacterium. Thermus thermophilus
-
Back,J.H., Park,J.H., Chung,J.H., Kim,D.S.H.L. and Han,Y.S. (2006) A distinct TthMutY bifunctional glycosylase that hydrolyzes not only adenine but also thymine opposite 8-oxoguanine in the hyperthermophilic bacterium, Thermus thermophilus. DNA Repair, 5, 894-903.
-
(2006)
DNA Repair
, vol.5
, pp. 894-903
-
-
Back, J.H.1
Park, J.H.2
Chung, J.H.3
Kim, D.S.H.L.4
Han, Y.S.5
-
61
-
-
0028857681
-
The base excision repair pathway
-
Seeberg,E., Eide,L. and Bjoras,M. (1995) The base excision repair pathway. Trends Biochem. Sci., 20, 391-397.
-
(1995)
Trends Biochem. Sci.
, vol.20
, pp. 391-397
-
-
Seeberg, E.1
Eide, L.2
Bjoras, M.3
-
62
-
-
0026447255
-
A repair system for 8-oxo-7 8-dihydrodeoxyguanine
-
Michaels,M.L., Tchou,J., Grollman,A.P. and Miller,J.H. (2002) A repair system for 8-oxo-7,8-dihydrodeoxyguanine. Biochemistry, 31, 10964-10968.
-
(2002)
Biochemistry
, vol.31
, pp. 10964-10968
-
-
Michaels, M.L.1
Tchou, J.2
Grollman, A.P.3
Miller, J.H.4
-
63
-
-
0035808729
-
Endonuclease V of Escherichia coli prevents mutations from nitrosative deamination during nitrate/nitrite respiration
-
Weiss,B. (2001) Endonuclease V of Escherichia coli prevents mutations from nitrosative deamination during nitrate/nitrite respiration. Mutat. Res., 461, 301-309.
-
(2001)
Mutat. Res.
, vol.461
, pp. 301-309
-
-
Weiss, B.1
-
64
-
-
0242380643
-
Incision at hypoxanthine residues in DNA by a mammalian homologue of the Escherichia coli antimutator enzyme endonuclease V
-
Moe,A., Ringvoll,J., Nordstrand,L.M., Eide,L., Bjoras,M., Seeberg,E., Rognes,T. and Klungland,A. (2003) Incision at hypoxanthine residues in DNA by a mammalian homologue of the Escherichia coli antimutator enzyme endonuclease V. Nucleic Acids Res., 31, 3893-3900.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3893-3900
-
-
Moe, A.1
Ringvoll, J.2
Nordstrand, L.M.3
Eide, L.4
Bjoras, M.5
Seeberg, E.6
Rognes, T.7
Klungland, A.8
-
65
-
-
33644619706
-
Prokaryotic nucleotide excision repair: the UvrABC system
-
Truglio,J.J., Croteau,D.L., Van Houten,B. and Kisker,C. (2006) Prokaryotic nucleotide excision repair: the UvrABC system. Chem. Rev., 106, 233-252.
-
(2006)
Chem. Rev.
, vol.106
, pp. 233-252
-
-
Truglio, J.J.1
Croteau, D.L.2
Van Houten, B.3
Kisker, C.4
-
66
-
-
0035902521
-
Participation of recombination proteins in rescue of arrested replication forks in UV-irradiated Escherichia coli need not involve recombination
-
Courcelle,J. and Hanawalt,P.C. (2001) Participation of recombination proteins in rescue of arrested replication forks in UV-irradiated Escherichia coli need not involve recombination. Proc. Natl Acad. Sci. USA, 98, 8196-8202.
-
(2001)
Proc. Natl Acad. Sci. USA
, vol.98
, pp. 8196-8202
-
-
Courcelle, J.1
Hanawalt, P.C.2
-
67
-
-
0037590607
-
RecBCD enzyme is a bipolar DNA helicase
-
Dillingham,M.S., Spies,M. and Kowalczykowski,S.C. (2003) RecBCD enzyme is a bipolar DNA helicase. Nature, 423, 893-897.
-
(2003)
Nature
, vol.423
, pp. 893-897
-
-
Dillingham, M.S.1
Spies, M.2
Kowalczykowski, S.C.3
-
68
-
-
14544272738
-
Effects of recJ, recQ, and recFOR mutations on recombination in nuclease-deficient recB recD double mutants of Escherichia coli
-
Ivancic-Bace,I., Salaj-Smic,E. and Brcic-Kostic,K. (2005) Effects of recJ, recQ, and recFOR mutations on recombination in nuclease-deficient recB recD double mutants of Escherichia coli. J. Bacteriol., 187, 1350-1356.
-
(2005)
J. Bacteriol.
, vol.187
, pp. 1350-1356
-
-
Ivancic-Bace, I.1
Salaj-Smic, E.2
Brcic-Kostic, K.3
-
69
-
-
73149087453
-
Transcription profile of Thermus thermophilus CRISPR systems after phage infection
-
Agari,Y., Sakamoto,K., Tamakoshi,M., Oshima,T., Kuramitsu,S. and Shinkai,A. (2010) Transcription profile of Thermus thermophilus CRISPR systems after phage infection. J. Mol. Biol., 395, 270-281.
-
(2010)
J. Mol. Biol.
, vol.395
, pp. 270-281
-
-
Agari, Y.1
Sakamoto, K.2
Tamakoshi, M.3
Oshima, T.4
Kuramitsu, S.5
Shinkai, A.6
-
70
-
-
39149142575
-
CRISPR-a widespread system that provides acquired resistance against phages in bacteria and archaea
-
Sorek,R., Kunin,V. and Hugenholtz,P. (2008) CRISPR-a widespread system that provides acquired resistance against phages in bacteria and archaea. Nat. Rev. Microbiol., 6, 181-186.
-
(2008)
Nat. Rev. Microbiol.
, vol.6
, pp. 181-186
-
-
Sorek, R.1
Kunin, V.2
Hugenholtz, P.3
-
71
-
-
60149089144
-
Regulatory RNAs in bacteria
-
Waters,L.S. and Storz,G. (2009) Regulatory RNAs in bacteria. Cell, 136, 615-628.
-
(2009)
Cell
, vol.136
, pp. 615-628
-
-
Waters, L.S.1
Storz, G.2
-
72
-
-
44049123270
-
Tandem mass spectrometry of small, multiply charged oligonucleotides
-
McLuckey,S.A., Van Berkel,G.J. and Glish,G.L. (1992) Tandem mass spectrometry of small, multiply charged oligonucleotides. J. Am. Soc. Mass Spectrom., 3, 60-70.
-
(1992)
J. Am. Soc. Mass Spectrom.
, vol.3
, pp. 60-70
-
-
McLuckey, S.A.1
Van Berkel, G.J.2
Glish, G.L.3
|