메뉴 건너뛰기




Volumn 7, Issue 51, 2010, Pages 1391-1401

Bioenergy research: A new paradigm in multidisciplinary research

Author keywords

Bioenergy; Ethanol; Integrated science; Microbe; Plant

Indexed keywords

ETHANOL; MICROORGANISMS;

EID: 77957146324     PISSN: 17425689     EISSN: 17425662     Source Type: Journal    
DOI: 10.1098/rsif.2009.0564     Document Type: Review
Times cited : (20)

References (90)
  • 1
    • 33646559836 scopus 로고    scopus 로고
    • Environmental whole-genome amplification to access microbial populations in contaminated sediments
    • (doi:10.1128/AEM.72.5.3291-3301.2006)
    • Abulencia, C. B. et al. 2006 Environmental whole-genome amplification to access microbial populations in contaminated sediments. Appl. Environ. Microbiol. 72, 3291-3301. (doi:10.1128/AEM.72.5.3291-3301.2006)
    • (2006) Appl. Environ. Microbiol. , vol.72 , pp. 3291-3301
    • Abulencia, C.B.1
  • 2
    • 32544431583 scopus 로고    scopus 로고
    • Proteogenomic approaches for the molecular characterization of natural microbial communities
    • (doi:10.1089/omi.2005.9.301)
    • Banfield, J. F., Verberkmoes, N. C., Hettich, R. L. & Thelen, M. P. 2005 Proteogenomic approaches for the molecular characterization of natural microbial communities. Omics J. Integr. Biol. 9, 301-333. (doi:10.1089/omi.2005. 9.301)
    • (2005) Omics J. Integr. Biol. , vol.9 , pp. 301-333
    • Banfield, J.F.1    Verberkmoes, N.C.2    Hettich, R.L.3    Thelen, M.P.4
  • 3
    • 4744368323 scopus 로고    scopus 로고
    • Carbohydrate-binding modules: Fine-tuning polysaccharide recognition
    • (doi:10.1042/BJ20040892)
    • Boraston, A. B., Bolam, D. N., Gilbert, H. J. & Davies, G. J. 2004 Carbohydrate-binding modules: fine-tuning polysaccharide recognition. Biochem. J. 382, 769-781. (doi:10.1042/BJ20040892)
    • (2004) Biochem. J. , vol.382 , pp. 769-781
    • Boraston, A.B.1    Bolam, D.N.2    Gilbert, H.J.3    Davies, G.J.4
  • 4
    • 84986512474 scopus 로고
    • CHARMM - A program for macromolecular energy, minimization, and dynamics calculations
    • (doi:10.1002/jcc.540040211)
    • Brooks, B. R., Bruccoleri, R. E., Olafson, B. D., States, D. J., Swaminathan, S. & Karplus, M. 1983 CHARMM - a program for macromolecular energy, minimization, and dynamics calculations. J. Comput. Chem. 4, 187-217. (doi:10.1002/jcc.540040211)
    • (1983) J. Comput. Chem. , vol.4 , pp. 187-217
    • Brooks, B.R.1    Bruccoleri, R.E.2    Olafson, B.D.3    States, D.J.4    Swaminathan, S.5    Karplus, M.6
  • 5
    • 69949169276 scopus 로고    scopus 로고
    • The structure, function, and biosynthesis of plant cell wall pectic polysaccharides
    • (doi:10.1016/j.carres.2009.05.021)
    • Caffall, K. H. & Mohnen, D. 2009 The structure, function, and biosynthesis of plant cell wall pectic polysaccharides. Carbohydr. Res. 344, 1879-1900. (doi:10.1016/j.carres.2009.05.021)
    • (2009) Carbohydr. Res. , vol.344 , pp. 1879-1900
    • Caffall, K.H.1    Mohnen, D.2
  • 6
    • 0027351945 scopus 로고
    • Structural models of primary-cell walls in flowering plants - Consistancy of molecular-structure with the physical-properties of the walls during growth
    • (doi:10.1111/j.1365-313X.1993.tb00007.x)
    • Carpita, N. C. & Gibeaut, D. M. 1993 Structural models of primary-cell walls in flowering plants - consistancy of molecular-structure with the physical-properties of the walls during growth. Plant J. 3, 1-30. (doi:10.1111/j.1365-313X.1993.tb00007.x)
    • (1993) Plant J. , vol.3 , pp. 1-30
    • Carpita, N.C.1    Gibeaut, D.M.2
  • 7
    • 34447319626 scopus 로고    scopus 로고
    • Lignin modification improves fermentable sugar yields for biofuel production
    • (doi:10.1038/nbt1316)
    • Chen, F. & Dixon, R. A. 2007 Lignin modification improves fermentable sugar yields for biofuel production. Nat. Biotechnol. 25, 759-761. (doi:10.1038/nbt1316)
    • (2007) Nat. Biotechnol. , vol.25 , pp. 759-761
    • Chen, F.1    Dixon, R.A.2
  • 8
    • 0742269402 scopus 로고    scopus 로고
    • Coherent anti-Stokes Raman scattering microscopy: Instrumentation, theory, and applications
    • (doi:10.1021/jp035693v)
    • Cheng, J. X. & Xie, X. S. 2004 Coherent anti-Stokes Raman scattering microscopy: instrumentation, theory, and applications. J. Phys. Chem. B 108, 827-840. (doi:10.1021/jp035693v)
    • (2004) J. Phys. Chem. B , vol.108 , pp. 827-840
    • Cheng, J.X.1    Xie, X.S.2
  • 10
    • 33646944861 scopus 로고    scopus 로고
    • Variation of S/G ratio and lignin content in a Populus family influences the release of xylose by dilute acid hydrolysis
    • (doi:10.1385/ABAB:130:1:427)
    • Davison, B. H., Drescher, S. R., Tuskan, G. A., Davis, M. F. & Nghiem, N. P. 2006 Variation of S/G ratio and lignin content in a Populus family influences the release of xylose by dilute acid hydrolysis. Appl. Biochem. Biotechnol. 130, 427-435. (doi:10.1385/ABAB:130:1:427)
    • (2006) Appl. Biochem. Biotechnol. , vol.130 , pp. 427-435
    • Davison, B.H.1    Drescher, S.R.2    Tuskan, G.A.3    Davis, M.F.4    Nghiem, N.P.5
  • 11
    • 70449592009 scopus 로고    scopus 로고
    • The goals and research of the bioenergy sciences center (BESC): Developing cost-effective and sustainable means of producing biofuels by overcoming biomass recalcitrance
    • (doi:10.1007/s12155-009-9057-7)
    • Davison, B. H., Keller, M. & Fowler, V. S. 2009 The goals and research of the bioenergy sciences center (BESC): developing cost-effective and sustainable means of producing biofuels by overcoming biomass recalcitrance. BioEnergy Res. 2, 177-178. (doi:10.1007/s12155-009-9057-7)
    • (2009) BioEnergy Res. , vol.2 , pp. 177-178
    • Davison, B.H.1    Keller, M.2    Fowler, V.S.3
  • 12
    • 70449556670 scopus 로고    scopus 로고
    • High-throughput screening techniques for biomass conversion
    • (doi:10.1007/s12155-009-9051-0)
    • Decker, S. R., Brunecky, R., Tucker, M. P., Himmel, M. E. & Selig, M. J. 2009 High-throughput screening techniques for biomass conversion. BioEnergy Res. 2, 179-192. (doi:10.1007/s12155-009-9051-0)
    • (2009) BioEnergy Res , vol.2 , pp. 179-192
    • Decker, S.R.1    Brunecky, R.2    Tucker, M.P.3    Himmel, M.E.4    Selig, M.J.5
  • 14
    • 46549089294 scopus 로고    scopus 로고
    • A biophysical perspective on the cellulosome: New opportunities for biomass conversion
    • (doi:10.1016/j.copbio.2008.04.008)
    • Ding, S. Y., Xu, Q., Crowley, M., Zeng, Y., Nimlos, M., Lamed, R., Bayer, E. A. & Himmel, M. E. 2008 A biophysical perspective on the cellulosome: new opportunities for biomass conversion. Curr. Opin. Biotechnol. 19, 218-227. (doi:10.1016/j.copbio.2008.04.008)
    • (2008) Curr. Opin. Biotechnol. , vol.19 , pp. 218-227
    • Ding, S.Y.1    Xu, Q.2    Crowley, M.3    Zeng, Y.4    Nimlos, M.5    Lamed, R.6    Bayer, E.A.7    Himmel, M.E.8
  • 15
    • 77957140404 scopus 로고    scopus 로고
    • DOE/SC-0166 2009 U.S. Department of Energy's Bioenergy Research Centers, See
    • DOE/SC-0166 2009 U.S. Department of Energy's Bioenergy Research Centers, An Overview of the Science. See http://genomicscience.energy.gov/centers/ brcbrochure.pdf.
    • An Overview of the Science
  • 17
    • 3142757398 scopus 로고    scopus 로고
    • Cellulosomes: Plant-cell-wall-degrading enzyme complexes
    • Doi, R. H. & Kosugi, A. 2004 Cellulosomes: plant-cell-wall-degrading enzyme complexes. Nat. Rev. Microbiol. 2, 541-551.
    • (2004) Nat. Rev. Microbiol. , vol.2 , pp. 541-551
    • Doi, R.H.1    Kosugi, A.2
  • 18
    • 67651166798 scopus 로고    scopus 로고
    • The effects of water on beta-D-Xylose condensation reactions
    • (doi:10.1021/jp9025442)
    • Dong, H. T., Nimlos, M. R., Himmel, M. E., Johnson, D. K. & Qian, X. H. 2009 The effects of water on beta-D-Xylose condensation reactions. J. Phys. Chem. A 113, 8577-8585. (doi:10.1021/jp9025442)
    • (2009) J. Phys. Chem. A , vol.113 , pp. 8577-8585
    • Dong, H.T.1    Nimlos, M.R.2    Himmel, M.E.3    Johnson, D.K.4    Qian, X.H.5
  • 19
    • 56449097178 scopus 로고    scopus 로고
    • Visualizing lignin coalescence and migration through maize cell walls following thermochemical pretreatment
    • (doi:10.1002/bit.21959)
    • Donohoe, B. S., Decker, S. R., Tucker, M. P., Himmel, M. E. & Vinzant, T. B. 2008 Visualizing lignin coalescence and migration through maize cell walls following thermochemical pretreatment. Biotechnol. Bioeng. 101, 913-925. (doi:10.1002/bit.21959)
    • (2008) Biotechnol. Bioeng. , vol.101 , pp. 913-925
    • Donohoe, B.S.1    Decker, S.R.2    Tucker, M.P.3    Himmel, M.E.4    Vinzant, T.B.5
  • 20
    • 0001302419 scopus 로고
    • Cellulose and the evolution of plant life
    • (doi:10.2307/1311160)
    • Duchesne, L. C. & Larson, D. W. 1989 Cellulose and the evolution of plant life. Bioscience 39, 238-241. (doi:10.2307/1311160)
    • (1989) Bioscience , vol.39 , pp. 238-241
    • Duchesne, L.C.1    Larson, D.W.2
  • 21
    • 0032503986 scopus 로고    scopus 로고
    • Primary production of the biosphere: Integrating terrestrial and oceanic components
    • (doi:10.1126/science.281.5374.237)
    • Field, C. B., Behrenfeld, M. J., Randerson, J. T. & Falkowski, P. 1998 Primary production of the biosphere: integrating terrestrial and oceanic components. Science 281, 237-240. (doi:10.1126/science.281.5374.237)
    • (1998) Science , vol.281 , pp. 237-240
    • Field, C.B.1    Behrenfeld, M.J.2    Randerson, J.T.3    Falkowski, P.4
  • 22
    • 70449602574 scopus 로고    scopus 로고
    • Variations in cellulosic ultrastructure of poplar
    • (doi:10.1007/s12155-009-9050-1)
    • Foston, M., Hubbell, C. A., Davis, M. & Ragauskas, A. J. 2009 Variations in cellulosic ultrastructure of poplar. BioEnergy Res. 2, 193-197. (doi:10.1007/s12155-009-9050-1)
    • (2009) BioEnergy Res. , vol.2 , pp. 193-197
    • Foston, M.1    Hubbell, C.A.2    Davis, M.3    Ragauskas, A.J.4
  • 23
    • 70549112091 scopus 로고    scopus 로고
    • Integrated omics approaches in plant systems biology
    • (doi:10.1016/j.cbpa.2009.09.022)
    • Fukushima, A., Kusano, M., Redestig, H., Arita, M. & Saito, K. 2009 Integrated omics approaches in plant systems biology. Curr. Opin. Chem. Biol. 13, 532-538. (doi:10.1016/j.cbpa.2009.09.022)
    • (2009) Curr. Opin. Chem. Biol. , vol.13 , pp. 532-538
    • Fukushima, A.1    Kusano, M.2    Redestig, H.3    Arita, M.4    Saito, K.5
  • 24
    • 56349154385 scopus 로고    scopus 로고
    • Laying down the bricks: Logistic aspects of cell wall biosynthesis
    • (doi:10.1016/j.pbi.2008.08.003)
    • Geisler, D. A., Sampathkumar, A., Mutwil, M. & Persson, S. 2008 Laying down the bricks: logistic aspects of cell wall biosynthesis. Curr. Opin. Plant Biol. 11, 647-652. (doi:10.1016/j.pbi.2008.08.003)
    • (2008) Curr. Opin. Plant Biol. , vol.11 , pp. 647-652
    • Geisler, D.A.1    Sampathkumar, A.2    Mutwil, M.3    Persson, S.4
  • 25
    • 33646920108 scopus 로고    scopus 로고
    • Poplar carbohydrate-active enzymes. Gene identification and expression analyses
    • (doi:10.1104/pp.105.072652)
    • Geisler-Lee, J. et al. 2006 Poplar carbohydrate-active enzymes. Gene identification and expression analyses. Plant Physiol. 140, 946-962. (doi:10.1104/pp.105.072652)
    • (2006) Plant Physiol. , vol.140 , pp. 946-962
    • Geisler-Lee, J.1
  • 26
    • 0024297010 scopus 로고
    • Precise excision of the cellulose binding domains from two Cellulomonas fimi cellulases by a homologous protease and the effect on catalysis
    • Gilkes, N. R., Warren, R. A. J., Miller, R. C. & Kilburn, D. G. 1988 Precise excision of the cellulose binding domains from two Cellulomonas fimi cellulases by a homologous protease and the effect on catalysis. J. Biol. Chem. 263, 10 401-10 407.
    • (1988) J. Biol. Chem. , vol.263 , pp. 10401-10407
    • Gilkes, N.R.1    Warren, R.A.J.2    Miller, R.C.3    Kilburn, D.G.4
  • 27
    • 67049115884 scopus 로고    scopus 로고
    • Fluorescence resonance energy transfer imaging of PKC signalling in living cells using genetically encoded fluorescent probes
    • (doi:10.1098/rsif.2008.0340.focus)
    • Goedhart, J. & Gadella, T. W. J. 2009 Fluorescence resonance energy transfer imaging of PKC signalling in living cells using genetically encoded fluorescent probes. J. R. Soc. Interface 6, S27-S34. (doi:10.1098/rsif.2008. 0340.focus)
    • (2009) J. R. Soc. Interface , vol.6
    • Goedhart, J.1    Gadella, T.W.J.2
  • 28
    • 34948817185 scopus 로고    scopus 로고
    • Global view of the Clostridium thermocellum cellulosome revealed by quantitative proteomic analysis
    • (doi:10.1128/JB.00882-07)
    • Gold, N. D. & Martin, V. J. J. 2007 Global view of the Clostridium thermocellum cellulosome revealed by quantitative proteomic analysis. J. Bacteriol. 189, 6787-6795. (doi:10.1128/JB.00882-07)
    • (2007) J. Bacteriol. , vol.189 , pp. 6787-6795
    • Gold, N.D.1    Martin, V.J.J.2
  • 29
    • 33746605947 scopus 로고    scopus 로고
    • A Sanger/pyrosequencing hybrid approach for the generation of high-quality draft assemblies of marine microbial genomes
    • (doi:10.1073/pnas.0604351103)
    • Goldberg, S. M. D. et al. 2006 A Sanger/pyrosequencing hybrid approach for the generation of high-quality draft assemblies of marine microbial genomes. Proc. Natl Acad. Sci. USA 103, 11 240-11 245. (doi:10.1073/pnas.0604351103)
    • (2006) Proc. Natl Acad. Sci. USA , vol.103 , pp. 11240-11245
    • Goldberg, S.M.D.1
  • 30
    • 67650021209 scopus 로고    scopus 로고
    • Microbial community profiling for human microbiome projects: Tools, techniques, and challenges
    • (doi:10.1101/gr.085464.108)
    • Hamady, M. & Knight, R. 2009 Microbial community profiling for human microbiome projects: tools, techniques, and challenges. Genome Res. 19, 1141-1152. (doi:10.1101/gr.085464.108)
    • (2009) Genome Res , vol.19 , pp. 1141-1152
    • Hamady, M.1    Knight, R.2
  • 31
    • 0034870609 scopus 로고    scopus 로고
    • A census of carbohydrate-active enzymes in the genome of Arabidopsis thaliana
    • (doi:10.1023/A:1010667012056)
    • Henrissat, B., Coutinho, P. M. & Davies, G. J. 2001 A census of carbohydrate-active enzymes in the genome of Arabidopsis thaliana. Plant Mol. Biol. 47, 55-72. (doi:10.1023/A:1010667012056)
    • (2001) Plant Mol. Biol. , vol.47 , pp. 55-72
    • Henrissat, B.1    Coutinho, P.M.2    Davies, G.J.3
  • 32
  • 34
    • 33846951759 scopus 로고    scopus 로고
    • Biomass recalcitrance: Engineering plants and enzymes for biofuels production
    • (doi:10.1126/science.1137016)
    • Himmel, M. E., Ding, S. Y., Johnson, D. K., Adney, W. S., Nimlos, M. R., Brady, J. W. & Foust, T. D. 2007 Biomass recalcitrance: engineering plants and enzymes for biofuels production. Science 315, 804-807. (doi:10.1126/science. 1137016)
    • (2007) Science , vol.315 , pp. 804-807
    • Himmel, M.E.1    Ding, S.Y.2    Johnson, D.K.3    Adney, W.S.4    Nimlos, M.R.5    Brady, J.W.6    Foust, T.D.7
  • 35
    • 0042349631 scopus 로고    scopus 로고
    • Intercellular adhesion and cell separation in plants
    • (doi:10.1046/j.1365-3040.2003.01034.x)
    • Jarvis, M. C., Briggs, S. P. H. & Knox, J. P. 2003 Intercellular adhesion and cell separation in plants. Plant Cell Environ. 26, 977-989. (doi:10.1046/j.1365-3040.2003.01034.x)
    • (2003) Plant Cell Environ. , vol.26 , pp. 977-989
    • Jarvis, M.C.1    Briggs, S.P.H.2    Knox, J.P.3
  • 36
    • 63349097597 scopus 로고    scopus 로고
    • Plant proteomics update (2007-2008): Second-generation proteomic techniques, an appropriate experimental design, and data analysis to fulfill MIAPE standards, increase plant proteome coverage and expand biological knowledge
    • (doi:10.1016/j.jprot.2009.01.026)
    • Jorrin-Novo, J. V. et al. 2009 Plant proteomics update (2007-2008): second-generation proteomic techniques, an appropriate experimental design, and data analysis to fulfill MIAPE standards, increase plant proteome coverage and expand biological knowledge. J. Proteomics 72, 285-314. (doi:10.1016/j.jprot. 2009.01.026)
    • (2009) J. Proteomics , vol.72 , pp. 285-314
    • Jorrin-Novo, J.V.1
  • 37
    • 85046915111 scopus 로고    scopus 로고
    • Life sciences a new biology to mend society's woes
    • (doi:10.1126/science.325-1609a)
    • Kaiser, J. 2009 Life sciences a new biology to mend society's woes. Science 325, 1609-1609. (doi:10.1126/science.325-1609a)
    • (2009) Science , vol.325 , pp. 1609-1609
    • Kaiser, J.1
  • 38
    • 70350445765 scopus 로고    scopus 로고
    • Shotgun proteome profile of Populus developing xylem
    • (doi:10.1002/pmic.200800854)
    • Kalluri, U. C., Hurst, G. B., Lankford, P. K., Ranjan, P. & Pelletier, D. A. 2009 Shotgun proteome profile of Populus developing xylem. Proteomics 9, 4871-4880. (doi:10.1002/pmic.200800854)
    • (2009) Proteomics , vol.9 , pp. 4871-4880
    • Kalluri, U.C.1    Hurst, G.B.2    Lankford, P.K.3    Ranjan, P.4    Pelletier, D.A.5
  • 39
    • 0025488244 scopus 로고
    • Physics and the emergence of molecular - A history of cognitive and political synergy
    • (doi:10.1007/BF00136376)
    • Keller, E. F. 1990 Physics and the emergence of molecular - a history of cognitive and political synergy. J. History Biol. 23, 389-409. (doi:10.1007/BF00136376)
    • (1990) J. History Biol. , vol.23 , pp. 389-409
    • Keller, E.F.1
  • 40
    • 63849104493 scopus 로고    scopus 로고
    • Environmental proteomics: A paradigm shift in characterizing microbial activities at the molecular level
    • (doi:10.1128/MMBR.00028-08)
    • Keller, M. & Hettich, R. 2009 Environmental proteomics: a paradigm shift in characterizing microbial activities at the molecular level. Microbiol. Mol. Biol. Rev. 73, 62. (doi:10.1128/MMBR.00028-08)
    • (2009) Microbiol. Mol. Biol. Rev. , vol.73 , pp. 62
    • Keller, M.1    Hettich, R.2
  • 41
    • 45849148479 scopus 로고    scopus 로고
    • Microbial goods from single cells and metagenomes
    • (doi:10.1016/j.mib.2008.05.003)
    • Keller, M. & Ramos, J. L. 2008 Microbial goods from single cells and metagenomes. Curr. Opin. Microbiol. 11, 195-197. (doi:10.1016/j.mib.2008.05.003)
    • (2008) Curr. Opin. Microbiol. , vol.11 , pp. 195-197
    • Keller, M.1    Ramos, J.L.2
  • 42
    • 1842560595 scopus 로고    scopus 로고
    • Tapping into microbial diversity
    • (doi:10.1038/nrmicro819)
    • Keller, M. & Zengler, K. 2004 Tapping into microbial diversity. Nat. Rev. Microbiol. 2, 141-150. (doi:10.1038/nrmicro819)
    • (2004) Nat. Rev. Microbiol. , vol.2 , pp. 141-150
    • Keller, M.1    Zengler, K.2
  • 44
    • 0036500993 scopus 로고    scopus 로고
    • Systems biology: A brief overview
    • (doi:10.1126/science.1069492)
    • Kitano, H. 2002 Systems biology: a brief overview. Science 295, 1662-1664. (doi:10.1126/science.1069492)
    • (2002) Science , vol.295 , pp. 1662-1664
    • Kitano, H.1
  • 45
    • 0029075881 scopus 로고
    • The anchorage function of CipA (CelL), a scaffolding protein of the Clostridium thermocellum cellulosome
    • (doi:10.1073/pnas.92.20.9254)
    • Kruus, K., Lua, A. C., Demain, A. L. & Wu, J. H. D. 1995 The anchorage function of CipA (CelL), a scaffolding protein of the Clostridium thermocellum cellulosome. Proc. Natl Acad. Sci. USA 92, 9254-9258. (doi:10.1073/pnas.92.20.9254)
    • (1995) Proc. Natl Acad. Sci. USA , vol.92 , pp. 9254-9258
    • Kruus, K.1    Lua, A.C.2    Demain, A.L.3    Wu, J.H.D.4
  • 46
    • 39849103907 scopus 로고
    • Interaction studies of the tail domain of cellobiohydrolace I and crystalline cellulose using molecular modeling
    • Kuutti, L., Laaksonen, L. & Teeri, T. T. 1991 Interaction studies of the tail domain of cellobiohydrolace I and crystalline cellulose using molecular modeling. J. Chim. Phys. Chim. Biol. 88, 2663-2667.
    • (1991) J. Chim. Phys. Chim. Biol. , vol.88 , pp. 2663-2667
    • Kuutti, L.1    Laaksonen, L.2    Teeri, T.T.3
  • 47
    • 0003020155 scopus 로고
    • The cellulosome of Clostridium thermocellum
    • (doi:10.1016/S0065-2164(08)70203-X)
    • Lamed, R. & Bayer, E. A. 1988 The cellulosome of Clostridium thermocellum. Adv. Appl. Microbiol. 33, 1-46. (doi:10.1016/S0065-2164(08)70203- X)
    • (1988) Adv. Appl. Microbiol. , vol.33 , pp. 1-46
    • Lamed, R.1    Bayer, E.A.2
  • 48
    • 0001311413 scopus 로고
    • Primary production of the major vegetation units of the world
    • (eds H. Lieth & R. H. Whittaker), Berlin, Germany: Springer
    • Lieth, H. 1975 Primary production of the major vegetation units of the world. In Primary production of the biosphere (eds H. Lieth & R. H. Whittaker), pp. 203-215. Berlin, Germany: Springer.
    • (1975) Primary Production of the Biosphere , pp. 203-215
    • Lieth, H.1
  • 49
    • 0343247806 scopus 로고    scopus 로고
    • The roles and function of cellulose-binding domains
    • (doi:10.1016/S0168-1656(97)00087-4)
    • Linder, M. & Teeri, T. T. 1997 The roles and function of cellulose-binding domains. J. Biotechnol. 57, 15-28. (doi:10.1016/S0168-1656(97) 00087-4)
    • (1997) J. Biotechnol. , vol.57 , pp. 15-28
    • Linder, M.1    Teeri, T.T.2
  • 50
    • 68149178810 scopus 로고    scopus 로고
    • Does the cellulose-binding module move on the cellulose surface?
    • (doi:10.1007/s10570-009-9306-0)
    • Liu, Y. S., Zeng, Y. N., Luo, Y. H., Xu, Q., Himmel, M. E., Smith, S. J. & Ding, S. Y. 2009 Does the cellulose-binding module move on the cellulose surface? Cellulose 16, 587-597. (doi:10.1007/s10570-009-9306-0)
    • (2009) Cellulose , vol.16 , pp. 587-597
    • Liu, Y.S.1    Zeng, Y.N.2    Luo, Y.H.3    Xu, Q.4    Himmel, M.E.5    Smith, S.J.6    Ding, S.Y.7
  • 51
    • 38949132602 scopus 로고    scopus 로고
    • How biotech can transform biofuels
    • (doi:10.1038/nbt0208-169)
    • Lynd, L. R. et al. 2008 How biotech can transform biofuels. Nat. Biotechnol. 26, 169-172. (doi:10.1038/nbt0208-169)
    • (2008) Nat. Biotechnol. , vol.26 , pp. 169-172
    • Lynd, L.R.1
  • 52
    • 0041784950 scopus 로고    scopus 로고
    • All-atom empirical potential for molecular modeling and dynamics studies of proteins
    • (doi:10.1021/jp973084f)
    • MacKerell, A. D. et al. 1998 All-atom empirical potential for molecular modeling and dynamics studies of proteins. J. Phys. Chem. B 102, 3586-3616. (doi:10.1021/jp973084f)
    • (1998) J. Phys. Chem. B , vol.102 , pp. 3586-3616
    • MacKerell, A.D.1
  • 53
    • 68649113311 scopus 로고    scopus 로고
    • The DOE bioEnergy science center-a US department of energy bioenergy research center
    • (doi:10.1007/s11627-009-9213-y)
    • Miller, R. & Keller, M. 2009 The DOE bioEnergy science center-a US department of energy bioenergy research center. Vitro Cell. Dev. Biol. Plant 45, 193-198. (doi:10.1007/s11627-009-9213-y)
    • (2009) Vitro Cell. Dev. Biol. Plant , vol.45 , pp. 193-198
    • Miller, R.1    Keller, M.2
  • 54
    • 58149103947 scopus 로고    scopus 로고
    • Functional and spectroscopic measurements with scanning tunneling microscopy
    • (doi:10.1146/annurev.anchem.1.031207.112932)
    • Moore, A. M. & Weiss, P. S. 2008 Functional and spectroscopic measurements with scanning tunneling microscopy. Ann. Rev. Anal. Chem. 1, 857-882. (doi:10.1146/annurev.anchem.1.031207.112932)
    • (2008) Ann. Rev. Anal. Chem. , vol.1 , pp. 857-882
    • Moore, A.M.1    Weiss, P.S.2
  • 55
    • 53649088131 scopus 로고    scopus 로고
    • Applications of next-generation sequencing technologies in functional genomics
    • (doi:10.1016/j.ygeno.2008.07.001)
    • Morozova, O. & Marra, M. A. 2008 Applications of next-generation sequencing technologies in functional genomics. Genomics 92, 255-264. (doi:10.1016/j.ygeno.2008.07.001)
    • (2008) Genomics , vol.92 , pp. 255-264
    • Morozova, O.1    Marra, M.A.2
  • 56
    • 48249155353 scopus 로고    scopus 로고
    • Multi-site genetic modification of monolignol biosynthesis in alfalfa (Medicago sativa): Effects on lignin composition in specific cell types
    • (doi:10.1111/j.1469-8137.2008.02502.x)
    • Nakashima, J., Chen, F., Jackson, L., Shadle, G. & Dixon, R. A. 2008 Multi-site genetic modification of monolignol biosynthesis in alfalfa (Medicago sativa): effects on lignin composition in specific cell types. New Phytol. 179, 738-750. (doi:10.1111/j.1469-8137.2008.02502.x)
    • (2008) New Phytol. , vol.179 , pp. 738-750
    • Nakashima, J.1    Chen, F.2    Jackson, L.3    Shadle, G.4    Dixon, R.A.5
  • 58
    • 33751231091 scopus 로고    scopus 로고
    • Energetics of xylose decomposition as determined using quantum mechanics modeling
    • (doi:10.1021/jp0626770)
    • Nimlos, M. R., Qian, X. H., Davis, M., Himmel, M. E. & Johnson, D. K. 2006 Energetics of xylose decomposition as determined using quantum mechanics modeling. J. Phys. Chem. A 110, 11 824-11 838. (doi:10.1021/jp0626770)
    • (2006) J. Phys. Chem. A , vol.110 , pp. 11824-11838
    • Nimlos, M.R.1    Qian, X.H.2    Davis, M.3    Himmel, M.E.4    Johnson, D.K.5
  • 59
    • 34347381336 scopus 로고    scopus 로고
    • Molecular modeling suggests induced fit of Family I carbohydrate-binding modules with a broken-chain cellulose surface
    • (doi:10.1093/protein/gzm010)
    • Nimlos, M. R. et al. 2007 Molecular modeling suggests induced fit of Family I carbohydrate-binding modules with a broken-chain cellulose surface. Protein Eng. Des. Sel. 20, 179-187. (doi:10.1093/protein/gzm010)
    • (2007) Protein Eng. Des. Sel. , vol.20 , pp. 179-187
    • Nimlos, M.R.1
  • 60
    • 43549097333 scopus 로고    scopus 로고
    • Cell-wall carbohydrates and their modification as a resource for biofuels
    • DOI 10.1111/j.1365-313X.2008.03463.x
    • Pauly, M. & Keegstra, K. 2008 Cell-wall carbohydrates and their modification as a resource for biofuels. Plant J. 54, 559-568. (doi:10.1111/j.1365-313X.2008.03463.x) (Pubitemid 351678047)
    • (2008) Plant Journal , vol.54 , Issue.4 , pp. 559-568
    • Pauly, M.1    Keegstra, K.2
  • 62
    • 65549115485 scopus 로고    scopus 로고
    • Cellulosic ethanol: Progress towards a simulation model of lignocellulosic biomass
    • See
    • Petridis, L. & Smith, J. C. 2008 Cellulosic ethanol: progress towards a simulation model of lignocellulosic biomass. J. Phys. Conf. Ser. 125, 012055. See http://iopscience.iop.org/1742-6596/125/1/012055
    • (2008) J. Phys. Conf. Ser. , vol.125 , pp. 012055
    • Petridis, L.1    Smith, J.C.2
  • 63
    • 34249701816 scopus 로고    scopus 로고
    • Targeted access to the genomes of low-abundance organisms in complex microbial communities
    • (doi:10.1128/AEM.02985-06)
    • Podar, M. et al. 2007 Targeted access to the genomes of low-abundance organisms in complex microbial communities. Appl. Environ. Microbiol. 73, 3205-3214. (doi:10.1128/AEM.02985-06)
    • (2007) Appl. Environ. Microbiol. , vol.73 , pp. 3205-3214
    • Podar, M.1
  • 64
    • 0002641940 scopus 로고    scopus 로고
    • The fate of acquired carbon in plants: Chemical composition and construction costs
    • (eds F. A. Bazzaz & J. Grace), San Diego, CA: Academic Press
    • Poorter, H. & Villar, R. 1997 The fate of acquired carbon in plants: chemical composition and construction costs. In Plant resource allocation (eds F. A. Bazzaz & J. Grace), pp. 39-72. San Diego, CA: Academic Press.
    • (1997) Plant Resource Allocation , pp. 39-72
    • Poorter, H.1    Villar, R.2
  • 66
    • 70449561168 scopus 로고    scopus 로고
    • NMR characterization of C3H and HCT down-regulated alfalfa lignin
    • (doi:10.1007/s12155-009-9056-8)
    • Pu, Y., Chen, F., Ziebell, A., Davison, B. H. & Ragauskas, A. J. 2009 NMR characterization of C3H and HCT down-regulated alfalfa lignin. BioEnergy Res. 2, 198-208. (doi:10.1007/s12155-009-9056-8)
    • (2009) BioEnergy Res , vol.2 , pp. 198-208
    • Pu, Y.1    Chen, F.2    Ziebell, A.3    Davison, B.H.4    Ragauskas, A.J.5
  • 67
    • 67649214495 scopus 로고    scopus 로고
    • Impact of pretreated switchgrass and biomass carbohydrates on Clostridium thermocellum ATCC 27405 cellulosome composition: A quantitative proteomic analysis
    • (doi:10.1371/journal.pone.0005271)
    • Raman, B., Pan, C., Hurst, G. B., Rodriguez Jr, M., McKeown, C. K., Lankford, P. K., Samatova, N. F. & Mielenz, J. R. 2009 Impact of pretreated switchgrass and biomass carbohydrates on Clostridium thermocellum ATCC 27405 cellulosome composition: a quantitative proteomic analysis. PLoS ONE 4, e5271. (doi:10.1371/journal.pone.0005271)
    • (2009) PLoS ONE , vol.4
    • Raman, B.1    Pan, C.2    Hurst, G.B.3    Rodriguez Jr., M.4    McKeown, C.K.5    Lankford, P.K.6    Samatova, N.F.7    Mielenz, J.R.8
  • 68
    • 0026487856 scopus 로고
    • Investigation of the function of mutated cellulose-binding domains of Trichoderma reesei cellobiohydrolase I
    • (doi:10.1002/prot.340140408)
    • Reinikainen, T., Ruohonen, L., Nevanen, T., Laaksonen, L., Kraulis, P., Jones, T. A., Knowles, K. C. & Teeri, T. T. 1992 Investigation of the function of mutated cellulose-binding domains of Trichoderma reesei cellobiohydrolase I. Proteins 14, 475-482. (doi:10.1002/prot.340140408)
    • (1992) Proteins , vol.14 , pp. 475-482
    • Reinikainen, T.1    Ruohonen, L.2    Nevanen, T.3    Laaksonen, L.4    Kraulis, P.5    Jones, T.A.6    Knowles, K.C.7    Teeri, T.T.8
  • 70
    • 77952889532 scopus 로고    scopus 로고
    • Structural characterization and comparison of switchgrass ball-milled lignin before and after dilute acid pretreatment
    • (doi:10.1007/s12010-009-8749-y)
    • Samuel, R., Pu, Y., Raman, B. & Ragauskas, A. 2009 Structural characterization and comparison of switchgrass ball-milled lignin before and after dilute acid pretreatment. Appl. Biochem. Biotechnol. 162, 62-74. (doi:10.1007/s12010-009-8749-y)
    • (2009) Appl. Biochem. Biotechnol. , vol.162 , pp. 62-74
    • Samuel, R.1    Pu, Y.2    Raman, B.3    Ragauskas, A.4
  • 71
    • 33746173718 scopus 로고    scopus 로고
    • Can biofuels finally take center stage?
    • (doi:10.1038/nbt0706-777)
    • Schubert, C. 2006 Can biofuels finally take center stage? Nat. Biotechnol. 24, 777-784. (doi:10.1038/nbt0706-777)
    • (2006) Nat. Biotechnol. , vol.24 , pp. 777-784
    • Schubert, C.1
  • 72
    • 19944414291 scopus 로고    scopus 로고
    • Toward a systems approach to understanding plant-cell walls
    • (doi:10.1126/science.1102765)
    • Somerville, C. et al. 2004 Toward a systems approach to understanding plant-cell walls. Science 306, 2206-2211. (doi:10.1126/science.1102765)
    • (2004) Science , vol.306 , pp. 2206-2211
    • Somerville, C.1
  • 73
    • 41149120660 scopus 로고    scopus 로고
    • Cellulose biosynthesis and deposition in higher plants
    • (doi:10.1111/j.1469-8137.2008.02385.x)
    • Taylor, N. G. 2008 Cellulose biosynthesis and deposition in higher plants. New Phytol. 178, 239-252. (doi:10.1111/j.1469-8137.2008.02385.x)
    • (2008) New Phytol , vol.178 , pp. 239-252
    • Taylor, N.G.1
  • 75
    • 0034649566 scopus 로고    scopus 로고
    • The Arabidopsis Genome Initiative 2000 Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
    • (doi:10.1038/35048692)
    • The Arabidopsis Genome Initiative 2000 Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408, 796-815. (doi:10.1038/35048692)
    • Nature , vol.408 , pp. 796-815
  • 76
    • 67650828376 scopus 로고    scopus 로고
    • Beneficial biofuels - The food, energy, and environment trilemma
    • (doi:10.1126/science.1177970)
    • Tilman, D. et al. 2009 Beneficial biofuels - the food, energy, and environment trilemma. Science 325, 270-271. (doi:10.1126/science.1177970)
    • (2009) Science , vol.325 , pp. 270-271
    • Tilman, D.1
  • 77
    • 20244376755 scopus 로고    scopus 로고
    • Comparative metagenomics of microbial communities
    • (doi:10.1126/science.1107851)
    • Tringe, S. G. et al. 2005 Comparative metagenomics of microbial communities. Science 308, 554-557. (doi:10.1126/science.1107851)
    • (2005) Science , vol.308 , pp. 554-557
    • Tringe, S.G.1
  • 78
    • 33748760611 scopus 로고    scopus 로고
    • The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)
    • (doi:10.1126/science.1128691)
    • Tuskan, G. A. et al. 2006 The genome of black cottonwood, Populus trichocarpa (Torr. & Gray). Science 313, 1596-1604. (doi:10.1126/science. 1128691)
    • (2006) Science , vol.313 , pp. 1596-1604
    • Tuskan, G.A.1
  • 79
    • 0035895505 scopus 로고    scopus 로고
    • The sequence of the human genome
    • (doi:10.1126/science.1058040)
    • Venter, J. C. et al. 2001 The sequence of the human genome. Science 291, 1304-1351. (doi:10.1126/science.1058040)
    • (2001) Science , vol.291 , pp. 1304-1351
    • Venter, J.C.1
  • 82
    • 67649807807 scopus 로고    scopus 로고
    • Natural paradigms of plant cell wall degradation
    • (doi:10.1016/j.copbio.2009.05.008)
    • Wei, H., Xu, Q., Taylor 2nd, L. E., Baker, J. O., Tucker, M. P. & Ding, S. Y. 2009 Natural paradigms of plant cell wall degradation. Curr. Opin. Biotechnol. 20, 330-338. (doi:10.1016/j.copbio.2009.05.008)
    • (2009) Curr. Opin. Biotechnol. , vol.20 , pp. 330-338
    • Wei, H.1    Xu, Q.2    Taylor II, L.E.3    Baker, J.O.4    Tucker, M.P.5    Ding, S.Y.6
  • 83
    • 43849087208 scopus 로고    scopus 로고
    • Biochemical control of xylan biosynthesis - Which end is up?
    • (doi:10.1016/j.pbi.2008.02.007)
    • York, W. S. & O'Neill, M. A. 2008 Biochemical control of xylan biosynthesis - which end is up? Curr. Opin. Plant Biol. 11, 258-265. (doi:10.1016/j.pbi.2008.02.007)
    • (2008) Curr. Opin. Plant Biol. , vol.11 , pp. 258-265
    • York, W.S.1    O'Neill, M.A.2
  • 84
    • 77955579333 scopus 로고    scopus 로고
    • Imaging lignin-down-regulated alfalfa using coherent anti-Stokes Raman scattering microscopy
    • In press. (doi:10.1007/s12155-010-9079-1)
    • Zeng, Y., Saar, B., Friedrich, M. G., Chen, F., Liu, Y.-S., Dixon, R. A., Himmel, M. E., Xie, X. S. & Ding, S.-Y. In press. Imaging lignin-down-regulated alfalfa using coherent anti-Stokes Raman scattering microscopy. BioEnergy Res. (doi:10.1007/s12155-010-9079-1)
    • BioEnergy Res
    • Zeng, Y.1    Saar, B.2    Friedrich, M.G.3    Chen, F.4    Liu, Y.-S.5    Dixon, R.A.6    Himmel, M.E.7    Xie, X.S.8    Ding, S.-Y.9
  • 85
    • 10844286172 scopus 로고    scopus 로고
    • Toward an aggregated understanding of enzymatic hydrolysis of cellulose: Non-complexed cellulase systems
    • (doi:10.1002/bit.20282)
    • Zhang, Y. H. P. & Lynd, L. R. 2004 Toward an aggregated understanding of enzymatic hydrolysis of cellulose: non-complexed cellulase systems. Biotechnol. Bioeng. 88, 797-824. (doi:10.1002/bit.20282)
    • (2004) Biotechnol. Bioeng. , vol.88 , pp. 797-824
    • Zhang, Y.H.P.1    Lynd, L.R.2
  • 86
    • 33746879626 scopus 로고    scopus 로고
    • A functionally based model for hydrolysis of cellulose by fungal cellulase
    • (doi:10.1002/bit.20906)
    • Zhang, Y. H. P. & Lynd, L. R. 2006 A functionally based model for hydrolysis of cellulose by fungal cellulase. Biotechnol. Bioeng. 94, 888-898. (doi:10.1002/bit.20906)
    • (2006) Biotechnol. Bioeng. , vol.94 , pp. 888-898
    • Zhang, Y.H.P.1    Lynd, L.R.2
  • 88
    • 77954291233 scopus 로고    scopus 로고
    • A NAC transcription factor orchestrates multiple features of cell wall development in Medicago truncatula
    • In press. (doi:10.1111/j.1365-313X.2010.04223)
    • Zhao, Q., Gallego-Giraldo, L., Wang, H., Zeng, Y., Ding, S.-Y., Chen, F. & Dixon, R. A. In press. A NAC transcription factor orchestrates multiple features of cell wall development in Medicago truncatula. Plant J. (doi:10.1111/j.1365-313X.2010.04223)
    • Plant J
    • Zhao, Q.1    Gallego-Giraldo, L.2    Wang, H.3    Zeng, Y.4    Ding, S.-Y.5    Chen, F.6    Dixon, R.A.7
  • 89
    • 46849091179 scopus 로고    scopus 로고
    • Molecular simulation evidence for processive motion of Trichoderma reesei Cel7A during cellulose depolymerization
    • (doi:10.1016/j.cplett.2008.05.060)
    • Zhao, X., Rignall, T. R., McCabe, C., Adney, W. S. & Himmel, M. E. 2008 Molecular simulation evidence for processive motion of Trichoderma reesei Cel7A during cellulose depolymerization. Chem. Phys. Lett. 460, 284-288. (doi:10.1016/j.cplett.2008.05.060)
    • (2008) Chem. Phys. Lett. , vol.460 , pp. 284-288
    • Zhao, X.1    Rignall, T.R.2    McCabe, C.3    Adney, W.S.4    Himmel, M.E.5
  • 90
    • 41349100272 scopus 로고    scopus 로고
    • Bacterial cellulose hydrolysis in anaerobic environmental subsystems - Clostridium thermocellum and Clostridium stercorarium, thermophilic plant-fiber degraders
    • Zverlov, V. V. & Schwarz, W. H. 2008 Bacterial cellulose hydrolysis in anaerobic environmental subsystems - Clostridium thermocellum and Clostridium stercorarium, thermophilic plant-fiber degraders. Ann. NY Acad. Sci. 1125, 298-307.
    • (2008) Ann. NY Acad. Sci. , vol.1125 , pp. 298-307
    • Zverlov, V.V.1    Schwarz, W.H.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.