Optimally designed nanolayered metal-dielectric particles as probes for massively multiplexed and ultrasensitive molecular assays

Proceedings of the National Academy of Sciences of the United States of America

Volumn 107, Issue 31, 2010, Pages 13620-13625

  Kodali, Anil K ^a,b   Llora, Xavier ^a   Bhargava, Rohit ^a,b  

^a UNIVERSITY OF ILLINOIS AT URBANA CHAMPAIGN   (United States)

^b University of Illinois at Urbana Champaign   (United States)

Author keywords

Chemical imaging; Raman spectroscopy; Surface enhanced; Vibrational spectroscopy

Indexed keywords

METAL; MOLECULAR LAYER; NANOSPHERE; METAL NANOPARTICLE; SILVER;

ALTERNATING METAL DIELECTRIC PROBE; ARTICLE; ELECTROMAGNETIC FIELD; GENETIC ALGORITHM; MOLECULAR PROBE; PRIORITY JOURNAL; SURFACE PLASMON RESONANCE; THEORETICAL MODEL; ALGORITHM; CHEMISTRY; EVALUATION; GENETIC PROCEDURES; REPRODUCIBILITY;

ALGORITHMS; ELECTROMAGNETIC FIELDS; METAL NANOPARTICLES; MOLECULAR PROBE TECHNIQUES; REPRODUCIBILITY OF RESULTS; SILVER;

EID: 77956360182     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1003926107     Document Type: Article

References (57)

1. Stiles PL, Dieringer JA, Shah NC, Van Duyne RP (2008) Surface-enhanced Raman spectroscopy. Annu Rev Anal Chem 1:601-626.
2. Doering WE, Piotti ME (2007) SERS as a foundation for nanoscale, optically detected biological labels. Adv Mater 19:3100-3108.
3. Doering WE, Nie S (2003) Spectroscopic tags using dye-embedded nanoparticles and surface-enhanced Raman scattering. Anal Chem 75:6171-6176. (Pubitemid 37420610)
4. Cao YC, Jin R, Mirkin CA (2002) Nanoparticles with Raman spectroscopic fingerprints for DNA and RNA detection. Science 297:1536-1540. (Pubitemid 34970997)
5. Faulds K, Smith WE, Graham D (2004) Evaluation of surface-enhanced resonance Raman scattering for quantitative DNA analysis. Anal Chem 76:412-417. (Pubitemid 38090780)
6. Zavaleta CL, et al. (2009) Multiplexed imaging of surface enhanced Raman scattering nanotags in livingmice using non-invasive Raman spectroscopy. Proc Natl Acad Sci USA 106:13511-13516.
7. Shim S, Stuart CM, and Mathies RA (2008) Resonance Raman cross sections and vibronic analysis of Rhodamine 6G from broadband and stimulated Raman spectroscopy. ChemPhysChem 9:697-699.
8. Qian X-M, Nie SM (2008) Single-molecule and single-nanoparticle SERS: from fundamental mechanisms to biomedical applications. Chem Soc Rev 37:912-920.
9. Banholer MJ, Millstone JE, Qin L, Mirkin CA (2009) Rationally designed nanostructures for surface enhanced Raman spectroscopy. Chem Soc Rev 37:885-897.
10. Kneipp J, Kneipp H, Kneipp K (2008) SERS-a single molecule and nanoscale tool for bioanalytics. Chem Soc Rev 37:1052-1060.
11. Pieczonka NPW, Aroca RF (2008) Single molecule analysis by surface-enhanced Raman scattering. Chem Soc Rev 37:946-954.
12. Su X, et al. (2005) Composite organic-inorganic nanoparticles (COINs) with chemically encoded optical signatures. Nano Lett 5:49-54. (Pubitemid 40168902)
13. Nam J-M, Thaxton CS, Mirkin CA (2003) Nanoparticle-based bio-bar codes for the ultrasensitive detection of proteins. Science 301:1884-1886. (Pubitemid 37221389)
14. Kim J-Hm, et al. (2006) Nanoparticle probes with surface enhanced Raman spectroscopic tags for cellular cancer targeting. Anal Chem 78:6967-6973.
15. Qian X, et al. (2008) In vivotumor targeting and spectroscopic detection with surface-enhanced Raman nanoparticle tags. Nat Biotechnol 83-90.
16. Keren S, et al. (2008) Noninvasive molecular imaging of small living subjects using Raman spectroscopy. Proc Natl Acad Sci USA 105:5844-5849. (Pubitemid 351758460)
17. McCarley RL, Dunaway DJ, Willicut RJ (1993) Mobility of the alkanethiol-gold(111) interface studied by scanning probe microscopy. Langmuir 9:2775-2777.
18. El-Sayed MA (2001) Some interesting properties of metals confined in tine and nanometer space of different shapes. Acc Chem Res 34:257-264.
19. Emory SR, Jensen RA, Wenda T, Han M, Nie S (2006) Re-examining the origins of spectral blinking in single-molecule and single-nanoparticle SERS. Faraday Discuss 132:249-259. (Pubitemid 44448247)
20. Fang Y, Seong NH, Dlott DD (2008) Measurement of distribution of site enhancements in surface-enhanced Raman scattering. Science 321:388-392. (Pubitemid 352029971)
21. Natan MJ (2006) Concluding remarks: surface enhanced Raman scattering. Faraday Discuss 132:321-328. (Pubitemid 44448253)
22. Nie S, Emory SR (1997) Probing single molecules and single nanoparticles by surface-enhanced Raman scattering. Science 275:1102-1106. (Pubitemid 27097304)
23. Kneipp K, et al. (1997) Single molecule detection using surface-enhanced Raman scattering (SERS). Phys Rev Lett 78:1667-1670. (Pubitemid 127648192)
24. Pettinger B, et al. (2000) Surface enhanced Raman spectroscopy: Towards single molecule spectroscopy. Electrochemistry 68:912-949. (Pubitemid 33646611)
25. Schlucker S (2009) SERS microscopy: Nanoparticle probes and biomedical applications. ChemPhysChem 10:1344-1354.
26. Goddard G, et al. (2010) High-resolution spectral analysis of individual SERS-active nanoparticles in flow. J Am Chem Soc 132:6081-6090.
27. Hildebrandt P, Stockhurger M (1984) Surface-enhanced resonance Raman spectroscopy of rhodamine 6G adsorbed on colloidal silver. J Phys Chem 88:5935-5944.
28. McLaughlin C, Graham D, Smith WE (2002) Comparison of resonant and non resonant conditions on the concentration dependence of surface enhanced Raman scattering from a dye adsorbed on silver colloid. J Phys Chem B 106:5408-5412. (Pubitemid 35281903)
29. Brown RJC, Milton MJT (2008) Nanostructures and nanostructured substrates for surface-enhanced Raman scattering (SERS). J Raman Spectrosc 29:1313-1326.
30. Xu H, Aizpurua J, Kall M, Apell P (2000) Electromagnetic contributions to single-molecule sensitivity in surface-enhanced Raman scattering. Phys Rev E 62:4318-4324.
31. Moskovits M (2005) Surface-enhanced Raman spectroscopy: A brief retrospective. J Raman Spectrosc 36:485-496.
32. Morton SM, Jensen L (2009) Understanding the molecule-surface chemical coupling in SERS. J Am Chem Soc 131:4090-4098.
33. Zou S, Schatz GC (2005) Silver nanoparticle arrays that produce giant enhancements in electromagnetic fields. Chem Phys Lett 403:62-67.
34. Xu H (2005) Multilayered metal core-shell nanostructures for inducing a large and tunable local optical field. Phys Rev B 72:0734051-0734054.
35. Jackson JB, Westcott SL, Hirsch LR, West JL, Halas NJ (2003) Controlling the surface enhanced Raman effect via the nanoshell geometry. Appl Phys Lett 82:257-259.
36. Prodan E, Radloff C, Halas NJ, Nordlander P (2003) A hybridization model for the plasmon response of complex nanostructures. Science 302:419-422.
37. Kneipp K, et al. (2002) Surface-enhanced Raman spectroscopy in single living cells using gold nanoparticles. Appl Spectrosc 56:150-154.
38. Xu H, Wang X-H, Persson MP, Xu HQ (2004) Unified treatment of fluorescence and Raman scattering processes near metal surfaces. Phys Rev Lett 93:243002.
39. Nomura K, et al. (2008) Fabrication of inert silver particleswith a thin silica coating. Jpn J Appl Phys 47:8642-8643.
40. Xia X, Liu Y, Backman V, Ameer GA (2006) Engineering sub-100 nm multi-layer nanoshells. Nanotechnology 17:5435-5440.
41. Goldberg DE (1989) Genetic Algorithms in Search, Optimization, and Machine Learning (Addison-Wesley, Reading, MA).
42. Chithrani BD, Ghazani AA, Chan WCW (2006) Determining the size and shape dependence of gold nanoparticle uptake into mammalian cells. Nano Lett 6:662-668.
43. Mahmoud MA, El-Sayeed MA (2009) Aggregation of gold nanoframes reduces, rather than enhances, SERS efficiency due to trade-off of the inter- and intraparticle plasmonic fields. Nano Lett 9:3025-3031.
44. Bardhan R, et al. (2009) Nanosphere-in-a-nanoshell: A simple nanomatryushka. J Phys Chem C 114:7378-7383.
45. Rohr TE, Cotton T, Fan N, Tarcha PJ (1989) Immunoassay employing surface-enhanced Raman spectroscopy. Anal Biochem 182:388-398.
46. Jackson JB, Westcott SL, Hirsch LR, West JL, Halas NJ (2002) Controlling the surface enhanced Raman effect via nanoshell geometry. Appl Phys Lett 82:257-259.
47. Zhang P, Gui Y (2009) Surface-enhanced Raman scattering inside metal nanoshells. J Am Chem Soc 131:3808-3809.
48. 2-precursors. Small 6:733-737.
49. Li JF, et al. (2010) Shell-isolated nanoparticle-enhanced Raman spectroscopy. Nature 464:392-395.
50. Zhao Y, Jiang L (2009) Hollow micro/nanomaterials with multilevel interior structures. Adv Mater 21:3621-3638.
51. Gao XH, et al. (2004) In vivo cancer targeting and imaging with semiconductor quantum dots. Nat Biotechnol 22:969-976.
52. Fernandez DC, Bhargava R, Hewitt SM, Levin IW(2005) Infrared spectroscopic imaging for observer-invariant histopathology. Nat Biotechnol 23:469-474.
53. Pierce WH (1957) Numerical integration over the spherical shell. Math Tables Other Aids Comput 11:244-249.
54. Sastry K, Goldberg DE (2001) Modeling tournament selection with replacement using apparent added noise. Intell Eng Syst Artif Syst 11:129-134.
55. Deb K, Agarwal R (1995) Simulated binary crossover for continuous search space. Complex Syst 9:115-148.
56. Deb K, Kumar A (1995) Real-coded genetic algorithms with simulated binary cross over: Studies on multimodal and multiobjective problems. Complex Syst 9:431-454.
57. Deb K (2001) Multi-Objective Optimization Using Evolutionary Algorithms (John Wiley, Chichester, UK).