GeoChip 3.0 as a high-throughput tool for analyzing microbial community composition, structure and functional activity

ISME Journal

Volumn 4, Issue 9, 2010, Pages 1167-1179

  He, Zhili ^a,h   Deng, Ye ^a,h   Van Nostrand, Joy D ^a,h   Tu, Qichao ^a,h   Xu, Meiying ^a,b   Hemme, Christopher L ^a,h   Li, Xingyuan ^c   Wu, Liyou ^a,h   Gentry, Terry J ^d   Yin, Yifeng ^e   Liebich, Jost ^f   Hazen, Terry C ^g,h   Zhou, Jizhong ^a,g,h  

^a UNIVERSITY OF OKLAHOMA   (United States)

^b GUANGDONG INSTITUTE OF MICROBIOLOGY   (China)

^c BioinformaticsPro   (United States)

^d TEXAS A AND M UNIVERSITY   (United States)

^e Trinity Biosystems Inc   (United States)

^f FORSCHUNGSZENTRUM JÜLICH   (Germany)

^g LAWRENCE BERKELEY NATIONAL LABORATORY   (United States)

^h Virtual Institute for Microbial Stress and Survival   (United States)

Author keywords

functional genes; microarray; microbial community; plant diversity

Indexed keywords

DNA TOPOISOMERASE (ATP HYDROLYSING);

ANTIBIOTIC RESISTANCE; BIODEGRADATION; BIOGEOCHEMICAL CYCLE; COMMUNITY COMPOSITION; ECOSYSTEM FUNCTION; EXPERIMENTAL STUDY; GRASSLAND; METABOLISM; MICROBIAL ACTIVITY; MICROBIAL COMMUNITY; PHYLOGENETICS; PLANT COMMUNITY; SOFTWARE; SOIL ECOSYSTEM; SOIL MICROORGANISM; SPECIES DIVERSITY;

ANTIBIOTIC RESISTANCE; ARTICLE; BACTERIUM; BIOLOGY; BIOTA; CLASSIFICATION; COMPUTER PROGRAM; DNA MICROARRAY; EVALUATION; GENETICS; METABOLISM; METAGENOMICS; METHODOLOGY; MICROARRAY ANALYSIS; MICROBIOLOGY; OLIGONUCLEOTIDE PROBE; PHYLOGENY; SENSITIVITY AND SPECIFICITY;

BACTERIA; BIOTA; COMPUTATIONAL BIOLOGY; DNA GYRASE; DRUG RESISTANCE, BACTERIAL; ENVIRONMENTAL MICROBIOLOGY; METABOLIC NETWORKS AND PATHWAYS; METAGENOMICS; MICROARRAY ANALYSIS; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; OLIGONUCLEOTIDE PROBES; PHYLOGENY; SENSITIVITY AND SPECIFICITY; SOFTWARE;

MINNESOTA; UNITED STATES;

EID: 77956094278     PISSN: 17517362     EISSN: 17517370     Source Type: Journal    
DOI: 10.1038/ismej.2010.46     Document Type: Article

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