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Volumn 36, Issue 4, 2004, Pages 664-675

Evaluation of 50-mer oligonucleotide arrays for detecting microbial populations in environmental samples

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA; CELL CULTURE; GENES; NITRIFICATION; NITROGEN FIXATION; OXIDATION;

EID: 1842579620     PISSN: 07366205     EISSN: None     Source Type: Journal    
DOI: 10.2144/04364rr02     Document Type: Article
Times cited : (131)

References (23)
  • 1
    • 0028946084 scopus 로고
    • Phylogenetic identification of in situ detection of individual microbial cells without cultivation
    • Amann, R.I., W. Ludwig, and K.H. Schleifer. 1995. Phylogenetic identification of in situ detection of individual microbial cells without cultivation. Microbiol. Rev. 59:143-169.
    • (1995) Microbiol. Rev. , vol.59 , pp. 143-169
    • Amann, R.I.1    Ludwig, W.2    Schleifer, K.H.3
  • 2
    • 0037772204 scopus 로고    scopus 로고
    • Microarrays for bacterial detection and microbial community analysis
    • Zhou, J. 2003. Microarrays for bacterial detection and microbial community analysis. Curr. Opin. Microbiol. 6:288-294.
    • (2003) Curr. Opin. Microbiol. , vol.6 , pp. 288-294
    • Zhou, J.1
  • 3
    • 0035656126 scopus 로고    scopus 로고
    • Development and evaluation of functional gene arrays for detection of selected genes in the environment
    • Wu, L.Y., D.K. Thompson, G. Li, R.A. Hurt, J.M. Tiedge, and J. Zhou. 2001. Development and evaluation of functional gene arrays for detection of selected genes in the environment. Appl. Environ. Microbiol. 67:5780-5790.
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 5780-5790
    • Wu, L.Y.1    Thompson, D.K.2    Li, G.3    Hurt, R.A.4    Tiedge, J.M.5    Zhou, J.6
  • 5
    • 0030669030 scopus 로고    scopus 로고
    • Exploring the metabolic and genetic control of gene expression on a genomic scale
    • DeRisi, J.L., V.R. Iyer, and P.O. Brown. 1997. Exploring the metabolic and genetic control of gene expression on a genomic scale. Science 278:680-686.
    • (1997) Science , vol.278 , pp. 680-686
    • DeRisi, J.L.1    Iyer, V.R.2    Brown, P.O.3
  • 7
    • 0011353166 scopus 로고    scopus 로고
    • Microarrays: Application in environmental microbiology
    • G. Bitton (Ed.). John Wiley and Sons, New York
    • Zhou, J. and D.K. Thompson. 2002. Microarrays: application in environmental microbiology, p. 1968-1979. In G. Bitton (Ed.), Encyclopedia of Environmental Microbiology, vol IV. John Wiley and Sons, New York.
    • (2002) Encyclopedia of Environmental Microbiology , vol.4 , pp. 1968-1979
    • Zhou, J.1    Thompson, D.K.2
  • 9
    • 0032401519 scopus 로고    scopus 로고
    • Expression of genes encoding the E2 and E3 components of the Bacillus stereothermophilus pyruvate dehydrogenase complex and the stoichiometry of subunit interaction in assembly in vitro
    • Lessard, I.A.D., G.J. Domingo, A. Borges, and R.N. Perham. 1998. Expression of genes encoding the E2 and E3 components of the Bacillus stereothermophilus pyruvate dehydrogenase complex and the stoichiometry of subunit interaction in assembly in vitro. Eur. J. Biochem. 258:491-501.
    • (1998) Eur. J. Biochem. , vol.258 , pp. 491-501
    • Lessard, I.A.D.1    Domingo, G.J.2    Borges, A.3    Perham, R.N.4
  • 12
    • 0038654477 scopus 로고    scopus 로고
    • Molecular diversity of denitrifying genes in continental margin sediments within the oxygen deficient zone of the Pacific Coast of Mexico
    • Liu, X., S.M. Tiquia, G. Holguin, L. Wu, A. Devol, S.C. Nold, A.V. Palumbo, J.M. Tiedje, et al. 2003. Molecular diversity of denitrifying genes in continental margin sediments within the oxygen deficient zone of the Pacific Coast of Mexico. Appl. Environ. Microbiol. 69:3549-3560.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 3549-3560
    • Liu, X.1    Tiquia, S.M.2    Holguin, G.3    Wu, L.4    Devol, A.5    Nold, S.C.6    Palumbo, A.V.7    Tiedje, J.M.8
  • 13
    • 0037229896 scopus 로고    scopus 로고
    • Molecular diversity and characterization of nitrite reductase gene fragments (nirK and nirS) from nitrate-and uranium-contaminated groundwater
    • Yan, T., M.W. Fields, L. Wu, Y. Zu, J.M. Tiedje, and J. Zhou. 2003. Molecular diversity and characterization of nitrite reductase gene fragments (nirK and nirS) from nitrate-and uranium-contaminated groundwater. Environ. Microbiol. 5:13-24.
    • (2003) Environ. Microbiol. , vol.5 , pp. 13-24
    • Yan, T.1    Fields, M.W.2    Wu, L.3    Zu, Y.4    Tiedje, J.M.5    Zhou, J.6
  • 14
    • 1842844023 scopus 로고    scopus 로고
    • PRIMEGENS: A computer program for robust and efficient design of gene-specific probes for microarray analysis
    • Xu, D., G. Li, L. Wu, J.-Z. Zhou, and Y. Xu. 2001. PRIMEGENS: a computer program for robust and efficient design of gene-specific probes for microarray analysis. Bioinformatics 18:1432-1437.
    • (2001) Bioinformatics , vol.18 , pp. 1432-1437
    • Xu, D.1    Li, G.2    Wu, L.3    Zhou, J.-Z.4    Xu, Y.5
  • 15
    • 1842494853 scopus 로고    scopus 로고
    • Key considerations for accurate microarray scanning and image analysis
    • G. Kamberova, (Ed.). DNA Press LLC, Salem, MA
    • Verdnik, D., S. Handran, and S. Pickett. 2002. Key considerations for accurate microarray scanning and image analysis, p. 89-98. In G. Kamberova, (Ed.), DNA Image Analysis: Nuts & Bolls. DNA Press LLC, Salem, MA.
    • (2002) DNA Image Analysis: Nuts & Bolls , pp. 89-98
    • Verdnik, D.1    Handran, S.2    Pickett, S.3
  • 16
    • 0038236052 scopus 로고
    • Genetics Computer Group, Madison, WI
    • Genetics Computer Group (GCG). 1994. GCG program manual. Genetics Computer Group, Madison, WI.
    • (1994) GCG Program Manual
  • 18
    • 0032524107 scopus 로고    scopus 로고
    • Immobilization of DNA in polyacrylamide gel for the manufacture of DNA and DNA-oligonucleotide microchips
    • Proudnikov, D., E. Timofeev, and A. Mirzabekov. 1998. Immobilization of DNA in polyacrylamide gel for the manufacture of DNA and DNA-oligonucleotide microchips. Anal. Biochem. 259:34-41.
    • (1998) Anal. Biochem. , vol.259 , pp. 34-41
    • Proudnikov, D.1    Timofeev, E.2    Mirzabekov, A.3
  • 22
    • 0141564886 scopus 로고    scopus 로고
    • Validation of a more sensitive method for using spotted oligonucleotide DNA microarrays for functional genomics studies on bacterial communities
    • Denef, V.J., J. Park, J.L. Rodrigues, T.V. Tsoi, S.A. Hashsham, and I.M. Tiedje. 2003. Validation of a more sensitive method for using spotted oligonucleotide DNA microarrays for functional genomics studies on bacterial communities. Environ. Microbiol. 5:933-943.
    • (2003) Environ. Microbiol. , vol.5 , pp. 933-943
    • Denef, V.J.1    Park, J.2    Rodrigues, J.L.3    Tsoi, T.V.4    Hashsham, S.A.5    Tiedje, I.M.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.