Development of a common oligonucleotide reference standard for microarray data normalization and comparison across different microbial communities

Applied and Environmental Microbiology

Volumn 76, Issue 4, 2010, Pages 1088-1094

  Liang, Yuting ^a,b,d   He, Zhili ^a,d   Wu, Liyou ^a,d   Deng, Ye ^a,d   Li, Guanghe ^c   Zhou, Jizhong ^a,d,e  

^a UNIVERSITY OF OKLAHOMA   (United States)

^b CHANGZHOU UNIVERSITY   (China)

^c TSINGHUA UNIVERSITY   (China)

^d Virtual Institute for Microbial Stress and Survival   (United States)

^e LAWRENCE BERKELEY NATIONAL LABORATORY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY SEQUENCES; DESULFOVIBRIO VULGARIS; ENVIRONMENTAL MICROBIOLOGY; FUNCTIONAL GENES; GENOME MICROARRAY; GENOMIC DNA; HIGH-DENSITY; LINEAR CORRELATION; MICROARRAY DATA; MICROBIAL COMMUNITIES; NORMALIZATION METHODS; OLIGONUCLEOTIDE PROBES; PURE CULTURE; REFERENCE STANDARD; REFERENCE TARGET; SIGNAL INTENSITIES; SOIL MICROBIAL COMMUNITY;

DNA; OLIGONUCLEOTIDES; PROBES; STANDARDIZATION; SYNTHESIS (CHEMICAL); TARGETS; TISSUE;

GENES;

BACTERIAL DNA;

DNA; GENE; GENOME; MICROBIAL COMMUNITY; SAMPLING; SOIL MICROORGANISM;

ARTICLE; BACTERIAL GENE; COMPARATIVE STUDY; DESULFOVIBRIO VULGARIS; DNA MICROARRAY; ECOSYSTEM; GENE EXPRESSION; GENETIC PROCEDURES; GENETICS; MICROBIAL GENETICS; MICROBIOLOGY; MUTATION; NUCLEOTIDE SEQUENCE; OLIGONUCLEOTIDE PROBE; RHODOPSEUDOMONAS; SHEWANELLA; STANDARD;

BASE SEQUENCE; DESULFOVIBRIO VULGARIS; DNA, BACTERIAL; ECOSYSTEM; ENVIRONMENTAL MICROBIOLOGY; GENE EXPRESSION; GENES, BACTERIAL; GENETICS, MICROBIAL; MOLECULAR PROBE TECHNIQUES; MUTATION; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; OLIGONUCLEOTIDE PROBES; REFERENCE STANDARDS; RHODOPSEUDOMONAS; SHEWANELLA;

DESULFOVIBRIO VULGARIS;

EID: 76649114015     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.02749-09     Document Type: Article

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