Stable carbon isotopic fractionations associated with inorganic carbon fixation by anaerobic ammonium-oxidizing bacteria

Applied and Environmental Microbiology

Volumn 70, Issue 6, 2004, Pages 3785-3788

  Schouten, Stefan ^a   Strous, Marc ^b   Kuypers, Marcel M M ^c   Rijpstra, W Irene C ^a   Baas, Marianne ^a   Schubert, Carsten J ^d   Jetten, Mike S M ^b   Damsté, Jaap S Sinninghe ^a  

^a ROYAL NETHERLANDS INSTITUTE FOR SEA RESEARCH   (Netherlands)

^b RADBOUD UNIVERSITY NIJMEGEN   (Netherlands)

^c MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY   (Germany)

^d Limnological Research Center   (Switzerland)

Author keywords

[No Author keywords available]

Indexed keywords

AMMONIUM COMPOUNDS; BACTERIA; CARBON; ENZYMES; FRACTIONATION; OXIDATION;

CARBON FIXATION; ISOTOPIC ANALYSIS;

MICROBIOLOGY;

ACETYL COENZYME A; AMMONIA; CARBON; CARBON DIOXIDE; LIPID;

MICROBIOLOGY;

ANAEROBIC BACTERIUM; ARTICLE; BROCADIA ANAMMOXIDANS; CARBON DIOXIDE FIXATION; CARBON FIXATION; CONTROLLED STUDY; FRACTIONATION; NONHUMAN; OXIDATION; SCALINDUA SOROKINII;

ANAEROBIOSIS; BACTERIA, ANAEROBIC; BIOREACTORS; CARBON COMPOUNDS, INORGANIC; CARBON DIOXIDE; CARBON ISOTOPES; CULTURE MEDIA; LIPID METABOLISM; OXIDATION-REDUCTION; QUATERNARY AMMONIUM COMPOUNDS; SEAWATER;

BACTERIA (MICROORGANISMS); CANDIDATUS BROCADIA ANAMMOXIDANS; CANDIDATUS SCALINDUA; CANDIDATUS SCALINDUA BRODAE;

EID: 2942590219     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.70.6.3785-3788.2004     Document Type: Article

References (21)

1. Hayes, J. M. 2001. Fractionation of carbon and hydrogen isotopes in biosynthetic processes. Rev. Min. Geochem. 43:225-278.
2. House, C. H., J. W. Schopf, and K. O. Stetter. 2003. Carbon isotopic fractionations by archaeans and other thermophilic prokaryotes. Org. Geochem. 34:345-356.
3. 2 fixation pathways in archaea (Crenarchaeota). Arch. Microbiol. 179:160-173.
4. Jahnke, L. L., R. E. Summons, J. M. Hope, and D. J. Des Marais. 1999. Carbon isotopic fractionation in lipids from methanotrophic bacteria. II. The effects of physiology and environmental parameters on the biosynthesis and isotopic signatures of biomarkers. Geochim. Cosmochim. Acta 63:79-93.
5. Jetten, M. S. M., W. R. Hagen, A. J. Pierik, et al. 1991. Paramagnetic centers and acetyl-coenzyme A/CO exchange activity of carbon monoxide dehydrogenase from Methanothrix soehngenii. Eur. J. Biochem. 195:385-391.
6. Jetten, M. S. M., G. A. Pitoc, M. T. Follettie, and A. J. Sinskey. 1994. Regulation of phospho(enol)-pyruvate- and oxaloacetate-converting enzymes in Corynebacterium glutamicum. Appl. Microbiol. Biotechnol. 41:47-52.
7. Jetten, M. S. M., M. Wagner, J. A. Fuerst, M. C. M. Van Loosdrecht, J. G. Kuenen, and M. Strous. 2001. Microbiology and application of the anaerobic ammonium oxidation ('anammox') process. Curr. Opin. Biotechnol. 12:283-288.
8. Jetten, M. S. M., A. O. Sliekers, M. M. M. Kuypers, T. Dalsgaard, L. van Niftrik, I. Cirpus, et al. 2003. Anaerobic ammonium oxidation by marine and freshwater planctomycete-like bacteria. Appl. Microbiol. Biotechnol. 63:107-114.
9. Kuypers, M. M. M., A. O. Sliekers, G. Lavik, M. Schmid, B. B. Jørgensen, J. G. Kuenen, et al. 2003. Anaerobic ammonium oxidation by anammox bacteria in the Black Sea. Nature 422:608-611.
10. Mook, W. G., J. G. Bommerson, and W. H. Staverman. 1974. Carbon isotope fractionation between dissolved bicarbonate and gaseous carbon dioxide. Earth Planet. Sci. Lett. 22:169-176.
11. 2 fixation pathways. Z. Naturforsch. 44:c397-c402.
12. Schauder, R., A. Preuß, M. S. M. Jetten, et al. 1989. Oxidative and reductive acetyl CoA carbon monoxide dehydrogenase pathway in Desulfobacterium autotrophicum. 2. Demonstration of the enzymes of the pathway and comparison of codehydrogenase. Arch. Microbiol. 151:84-89.
13. Schmid, M., U. Twachtmann, M. Klein, M. Strous, S. Juretschko, M. S. M. Jetten, J. W. Metzger, K. H. Schleifer, and M. Wagner. 2000. Molecular evidence for genus level diversity of bacteria capable of catalyzing anaerobic ammonium oxidation. Syst. Appl. Microbiol. 23:93-106.
14. Schmid, M., K. Walsh, R. Webb, W. I. C. Rijpstra, K. van de Pas-Schoonen, M. J. Verbruggen, T. Hill, B. Moffett, J. Fuerst, S. Schouten, J. S. Sinninghe Damsté, J. Harris, P. Shaw, M. Jetten, and M. Strous. 2003. Candidatus "Scalindua brodaea," spec. nov., Candidatus "Scalindua wagneri," spec. nov., two new species of anaerobic ammonium oxidizing bacteria. Syst. Appl. Microbiol. 26:529-538.
15. Schouten, S., W. C. M. Klein-Breteler, P. Blokker, N. Schogt, K. Grice, W. I. C. Rijpstra, M. Baas, and J. S. Sinninghe Damsté. 1998. Biosynthetic effects on the stable carbon isotopic compositions of algal lipids: implications for deciphering the carbon isotopic biomarker record. Geochim. Cosmochim. Acta 62:1397-1406.
16. Sinninghe Damsté, J. S., M. Strous, W. I. C. Rijpstra, E. C. Hopmans, J. A. J. Geenevasen, A. C. T. Van Duin, L. A. Van Niftrik, and M. S. M. Jetten. 2002. Linearly concatenated cyclobutane lipids form a dense bacterial membrane. Nature 419:708-712.
17. Strous, M., J. J. Heijnen, J. G. Kuenen, and M. S. M. Jetten. 1998. The sequencing batch reactor as a powerful tool for the study of slowly growing anaerobic ammonium-oxidizing microorganisms. Appl. Microbiol. Biotechnol. 50:589-596.
18. Strous, M., J. A. Fuerst, E. H. M. Kramer, S. Logemann, G. Muyzer, K. T. Van de Pas-Schoonen, R. Webb, J. G. Kuenen, and M. S. M. Jetten. 1999. Missing lithotroph identified as new planctomycete. Nature 400:446-449.
19. 13C contents of organic components in the photoautotrophic bacterium Chloroflexus aurantiacus. J. Biol. Chem. 276: 10971-10976.
20. Van der Meer, M. J. T., S. Schouten, G. Fuchs, and J. S. Sinninghe Damsté. 2001. Stable carbon isotope fractionations of the hyperthermophilic crenarchaeon Metallosphaera sedula. FEMS Microbiol. Lett. 196:67-70.
21. Zhang, C. L., Y. Qi, A.-L. Reysenbach, D. Gotz, A. Peacock, D. C. White, J. Horita, D. R. Cole, J. Fong, L. Pratt, J. Fang, and Y. Huang. 2002. Carbon isotopic fractionation associated with thermophilic bacteria Thermotoga maritima and Persephonella marina. Environ. Microbiol. 4:58-64.