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Volumn 65, Issue 8, 1999, Pages 3690-3696

Microscale distribution of populations and activities of Nitrosospira and Nitrospira spp. along a macroscale gradient in a nitrifying bioreactor: Quantification by in situ hybridization and the use of microsensors

Author keywords

[No Author keywords available]

Indexed keywords

AMMONIA; NITRATE; NITRITE; WATER;

EID: 0032812283     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/aem.65.8.3690-3696.1999     Document Type: Article
Times cited : (423)

References (37)
  • 1
    • 0343765712 scopus 로고    scopus 로고
    • Modern methods in subsurface microbiology: In situ identification of microorganisms with nucleic acid probes
    • Amann, R., F. O. Glöckner, and A. Neef. 1997. Modern methods in subsurface microbiology: in situ identification of microorganisms with nucleic acid probes. FEMS Microbiol. Rev. 20:191-200.
    • (1997) FEMS Microbiol. Rev. , vol.20 , pp. 191-200
    • Amann, R.1    Glöckner, F.O.2    Neef, A.3
  • 2
    • 0032082492 scopus 로고    scopus 로고
    • In situ methods for assessment of microorganisms and their activities
    • Amann, R., and M. Kühl. 1998. In situ methods for assessment of microorganisms and their activities. Curr. Opin. Microbiol. 1:352-358.
    • (1998) Curr. Opin. Microbiol. , vol.1 , pp. 352-358
    • Amann, R.1    Kühl, M.2
  • 3
    • 0028946084 scopus 로고
    • Phylogenetic identification and in situ detection of individual microbial cells without cultivation
    • Amann, R. I., W. Ludwig, and K.-H. Schleifer. 1995. Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol. Rev. 59:143-169.
    • (1995) Microbiol. Rev. , vol.59 , pp. 143-169
    • Amann, R.I.1    Ludwig, W.2    Schleifer, K.-H.3
  • 4
    • 0025099312 scopus 로고
    • Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology
    • Amann, R. I., L. Krumholz, and D. A. Stahl. 1990. Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology. J. Bacteriol. 172:762-770.
    • (1990) J. Bacteriol. , vol.172 , pp. 762-770
    • Amann, R.I.1    Krumholz, L.2    Stahl, D.A.3
  • 5
    • 0001818828 scopus 로고
    • R- and K-selection and microbial ecology
    • Andrews, J. H., and R. F. Harris. 1986. r- and K-selection and microbial ecology. Adv. Microb. Ecol. 9:99-147.
    • (1986) Adv. Microb. Ecol. , vol.9 , pp. 99-147
    • Andrews, J.H.1    Harris, R.F.2
  • 6
    • 0018401930 scopus 로고
    • Population ecology of nilrifying bacteria
    • Belser, L. W. 1979. Population ecology of nilrifying bacteria. Annu. Rev. Microbiol. 33:309-333.
    • (1979) Annu. Rev. Microbiol. , vol.33 , pp. 309-333
    • Belser, L.W.1
  • 8
    • 0003068174 scopus 로고
    • Gas exchange rates between air and sea
    • Broecker, W. S., and T.-H. Peng. 1974. Gas exchange rates between air and sea. Tellus 26:21-35.
    • (1974) Tellus , vol.26 , pp. 21-35
    • Broecker, W.S.1    Peng, T.-H.2
  • 9
    • 0019513663 scopus 로고
    • Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli
    • Brosius, J., T. J. Dull, D. D. Sleeter, and H. F. Noller. 1981. Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli. J. Mol. Biol. 148:107-127.
    • (1981) J. Mol. Biol. , vol.148 , pp. 107-127
    • Brosius, J.1    Dull, T.J.2    Sleeter, D.D.3    Noller, H.F.4
  • 12
    • 0027476683 scopus 로고
    • Microelectrode measurements of the activity distribution in nitrifying bacterial aggregates
    • de Beer, D., J. C. van den Heuvel, and S. P. P. Ottengraf. 1993. Microelectrode measurements of the activity distribution in nitrifying bacterial aggregates. Appl. Environ. Microbiol. 59:573-579.
    • (1993) Appl. Environ. Microbiol. , vol.59 , pp. 573-579
    • De Beer, D.1    Van Den Heuvel, J.C.2    Ottengraf, S.P.P.3
  • 13
    • 0029121005 scopus 로고
    • A new obligately chemolithoautotrophic, nitrite-oxidizing bacterium, Nitrospira moscoviensis sp. nov. and its phylogenetic relationship
    • Ehrich, S-, D. Behrens, E. Lebedeva, W. Ludwig, and E. Bock. 1995. A new obligately chemolithoautotrophic, nitrite-oxidizing bacterium, Nitrospira moscoviensis sp. nov. and its phylogenetic relationship. Arch. Microbiol. 164:16-23.
    • (1995) Arch. Microbiol. , vol.164 , pp. 16-23
    • Ehrich, S.-.1    Behrens, D.2    Lebedeva, E.3    Ludwig, W.4    Bock, E.5
  • 14
    • 0001349433 scopus 로고
    • Biochemical ecology of nitrification and denitrification
    • Focht, D. D., and W. Verstraete. 1977. Biochemical ecology of nitrification and denitrification. Adv. Microb. Ecol. 1:135-214.
    • (1977) Adv. Microb. Ecol. , vol.1 , pp. 135-214
    • Focht, D.D.1    Verstraete, W.2
  • 15
    • 0029669586 scopus 로고    scopus 로고
    • Comparative analysis of nitrifying bacteria associated with freshwater and marine aquaria
    • Hovanec, T. A., and E. F. DeLong. 1996. Comparative analysis of nitrifying bacteria associated with freshwater and marine aquaria. Appl. Environ. Microbiol. 62:2888-2896.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 2888-2896
    • Hovanec, T.A.1    DeLong, E.F.2
  • 16
    • 0031975148 scopus 로고    scopus 로고
    • Nitrospira-like bacteria associated with nitrite oxidation in freshwater aquaria
    • Hovanec, T. A., L. T. Taylor, A. Blakis, and E. F. DeLong. 1998. Nitrospira-like bacteria associated with nitrite oxidation in freshwater aquaria. Appl. Environ. Microbiol. 64:258-264.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 258-264
    • Hovanec, T.A.1    Taylor, L.T.2    Blakis, A.3    DeLong, E.F.4
  • 17
    • 0027444859 scopus 로고
    • Kinetics of Nitrobacter agilis at extreme substrate, product and salt concentrations
    • Hunik, J. H., H. J. G. Meijer, and J. Tramper. 1993. Kinetics of Nitrobacter agilis at extreme substrate, product and salt concentrations. Appl. Microbiol. Biotech. 40:442-448.
    • (1993) Appl. Microbiol. Biotech. , vol.40 , pp. 442-448
    • Hunik, J.H.1    Meijer, H.J.G.2    Tramper, J.3
  • 18
    • 0026706451 scopus 로고
    • Kinetics of Nitrosomonas europaea at extreme substrate, product and salt concentrations
    • Hunik, J. H., H. J. G. Meijer, and J. Tramper. 1992. Kinetics of Nitrosomonas europaea at extreme substrate, product and salt concentrations. Appl. Microbiol. Biotech. 37:802-807.
    • (1992) Appl. Microbiol. Biotech. , vol.37 , pp. 802-807
    • Hunik, J.H.1    Meijer, H.J.G.2    Tramper, J.3
  • 19
    • 0025570316 scopus 로고
    • The diffusive boundary layer of sediments: Oxygen microgradients over a microbial mat
    • Jørgensen, B. B., and D. J. Des Marais. 1990. The diffusive boundary layer of sediments: oxygen microgradients over a microbial mat. Limnol. Oceanogr. 35:1343-1355.
    • (1990) Limnol. Oceanogr. , vol.35 , pp. 1343-1355
    • Jørgensen, B.B.1    Des Marais, D.J.2
  • 20
    • 0032147190 scopus 로고    scopus 로고
    • Combined molecular and conventional analysis of nitrifying bacterial diversity in activated sludge: Mirosococcus mobilis and Nitrospira-like bacteria as dominant populations
    • Juretschko, S., G. Timmermann, M. Schmidt, K.-H. Schleifer, A. Pommerening-Röser, H.-P. Koops, and M. Wagner. 1998. Combined molecular and conventional analysis of nitrifying bacterial diversity in activated sludge: Mirosococcus mobilis and Nitrospira-like bacteria as dominant populations. Appl. Environ. Microbiol. 64:3042-3051.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 3042-3051
    • Juretschko, S.1    Timmermann, G.2    Schmidt, M.3    Schleifer, K.-H.4    Pommerening-Röser, A.5    Koops, H.-P.6    Wagner, M.7
  • 21
    • 0026581545 scopus 로고
    • Microsensor measurement of sulfate reduction and Sulfide oxidation in compact microbial communities of aerobic biofilms
    • Kühl, M., and B. B. Jørgensen. 1992. Microsensor measurement of sulfate reduction and Sulfide oxidation in compact microbial communities of aerobic biofilms. Appl. Environ. Microbiol. 58:1164-1174.
    • (1992) Appl. Environ. Microbiol. , vol.58 , pp. 1164-1174
    • Kühl, M.1    Jørgensen, B.B.2
  • 22
    • 0013117517 scopus 로고    scopus 로고
    • Microsensors for the study of interfacial biogeochemical processes
    • B. P. Boudreau and B. B. Jørgensen (ed.), in press. Oxford University Press, Oxford, England
    • Kühl, M., and N. P. Revsbech. Microsensors for the study of interfacial biogeochemical processes. In B. P. Boudreau and B. B. Jørgensen (ed.), The benthic boundary layer, in press. Oxford University Press, Oxford, England.
    • The Benthic Boundary Layer
    • Kühl, M.1    Revsbech, N.P.2
  • 23
    • 49549157667 scopus 로고
    • Diffusion of ions in sea water and in deep-sea sediments
    • Li, Y. H., and S. Gregory. 1974. Diffusion of ions in sea water and in deep-sea sediments. Geochim. Cosm. Acta 38:703-714.
    • (1974) Geochim. Cosm. Acta , vol.38 , pp. 703-714
    • Li, Y.H.1    Gregory, S.2
  • 24
    • 0027068041 scopus 로고
    • Phylogenetic oligodeoxynucleotide probes for the major subclasses of proteobacteria: Problems and solutions
    • Manz, W., R. Amann, W. Ludwig, M. Wagner, and K.-H. Schleifer. 1992 Phylogenetic oligodeoxynucleotide probes for the major subclasses of proteobacteria: problems and solutions. Syst. Appl. Microbiol. 15:593-600.
    • (1992) Syst. Appl. Microbiol. , vol.15 , pp. 593-600
    • Manz, W.1    Amann, R.2    Ludwig, W.3    Wagner, M.4    Schleifer, K.-H.5
  • 25
    • 0030001221 scopus 로고    scopus 로고
    • Phylogenetic probes for analyzing abundance and spatial organization of nitrifying bacteria
    • Mobarry, B. K., M. Wagner, V. Urbain, B. E. Rittmann, and D. A. Stahl. 1996. Phylogenetic probes for analyzing abundance and spatial organization of nitrifying bacteria. Appl. Environ. Microbiol. 62:2156-2162.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 2156-2162
    • Mobarry, B.K.1    Wagner, M.2    Urbain, V.3    Rittmann, B.E.4    Stahl, D.A.5
  • 27
    • 0024822090 scopus 로고
    • Autotrophic nitrification in bacteria
    • Prosser, J. I. 1989. Autotrophic nitrification in bacteria. Adv. Microb. Physiol. 30:125-181.
    • (1989) Adv. Microb. Physiol. , vol.30 , pp. 125-181
    • Prosser, J.I.1
  • 28
    • 0027375701 scopus 로고
    • 2S in photosynthetic biofilms determined by oligonucleotide probes and microelectrodes
    • 2S in photosynthetic biofilms determined by oligonucleotide probes and microelectrodes. Appl. Environ. Microbiol. 59: 3840-3849.
    • (1993) Appl. Environ. Microbiol. , vol.59 , pp. 3840-3849
    • Ramsing, N.B.1    Kühl, M.2    Jørgensen, B.B.3
  • 29
    • 84986767568 scopus 로고
    • An oxygen microelectrode with a guard cathode
    • Revsbech, N. P. 1989. An oxygen microelectrode with a guard cathode. Limnol. Oceanogr. 34:474-478.
    • (1989) Limnol. Oceanogr. , vol.34 , pp. 474-478
    • Revsbech, N.P.1
  • 30
    • 0000224938 scopus 로고
    • Microelectrodes: Their use in microbial ecology
    • K. C. Marshall (ed.), Plenum, New York, N.Y.
    • Revsbech, N. P., and B. B. Jørgensen. 1986. Microelectrodes: their use in microbial ecology, p. 293-352. In K. C. Marshall (ed.), Advances in microbial ecology, vol. 9. Plenum, New York, N.Y.
    • (1986) Advances in Microbial Ecology , vol.9 , pp. 293-352
    • Revsbech, N.P.1    Jørgensen, B.B.2
  • 31
    • 0022845670 scopus 로고
    • Oxygen production and consumption in sediments determined at high spatial resolution by computer simulation of oxygen microelectrode data
    • Revsbech, N. P., B. Madsen, and B. B. Jørgensen. 1986. Oxygen production and consumption in sediments determined at high spatial resolution by computer simulation of oxygen microelectrode data. Limnol Oceanogr. 31:293-304.
    • (1986) Limnol Oceanogr. , vol.31 , pp. 293-304
    • Revsbech, N.P.1    Madsen, B.2    Jørgensen, B.B.3
  • 32
    • 0031684927 scopus 로고    scopus 로고
    • Identification and activity in situ of Nitrosospira and Nitrospira spp. as dominant populations in a nitrifying fluidized bed reactor
    • Schramm, A., D. de Beer, M. Wagner, and R. Amann. 1998. Identification and activity in situ of Nitrosospira and Nitrospira spp. as dominant populations in a nitrifying fluidized bed reactor. Appl. Environ. Microbiol. 64:3480-3485.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 3480-3485
    • Schramm, A.1    De Beer, D.2    Wagner, M.3    Amann, R.4
  • 33
    • 0030848013 scopus 로고    scopus 로고
    • Structure and function of a nitrifying biofilm as determined by microelectrodes and fluorescent oligonucleotide probes
    • Schramm, A., L. H. Larsen, N. P. Revsbech, and R. I. Amann. 1997. Structure and function of a nitrifying biofilm as determined by microelectrodes and fluorescent oligonucleotide probes. Water Sci. Tech. 36:263-270.
    • (1997) Water Sci. Tech. , vol.36 , pp. 263-270
    • Schramm, A.1    Larsen, L.H.2    Revsbech, N.P.3    Amann, R.I.4
  • 34
    • 0029659250 scopus 로고    scopus 로고
    • Structure and function of a nitrifying biofilm as determined by in situ hybridization and the use of microelectrodes
    • Schramm, A., L. H. Larsen, N. P. Revsbech, N. B. Ramsing, R. Amann, and K.-H. Schleifer. 1996. Structure and function of a nitrifying biofilm as determined by in situ hybridization and the use of microelectrodes. Appl. Environ. Microbiol. 62:4641-4647.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 4641-4647
    • Schramm, A.1    Larsen, L.H.2    Revsbech, N.P.3    Ramsing, N.B.4    Amann, R.5    Schleifer, K.-H.6
  • 35
    • 0344337165 scopus 로고    scopus 로고
    • Unpublished data
    • Schramm, A., et al. Unpublished data.
    • Schramm, A.1
  • 37
    • 0029825018 scopus 로고    scopus 로고
    • In situ analysis of nitrifying bacteria in sewage treatment plants
    • Wagner, M., G. Rath, H.-P. Koops, J. Flood, and R. Amann. 1996. In situ analysis of nitrifying bacteria in sewage treatment plants. Water Sci. Tech. 34:237-244.
    • (1996) Water Sci. Tech. , vol.34 , pp. 237-244
    • Wagner, M.1    Rath, G.2    Koops, H.-P.3    Flood, J.4    Amann, R.5


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