Molecular analysis of dimethyl sulphide dehydrogenase from Rhodovulum sulfidophilum: Its place in the dimethyl sulphoxide reductase family of microbial molybdopterin-containing enzymes

Molecular Microbiology

Volumn 44, Issue 6, 2002, Pages 1575-1587

  McDevitt, Christopher A ^a   Hugenholtz, Philip ^a   Hanson, Graeme R ^a   McEwan, Alastair G ^a  

^a UNIVERSITY OF QUEENSLAND   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

CYTOCHROME C2; DIMETHYL SULFIDE DEHYDROGENASE; DIMETHYL SULFOXIDE REDUCTASE; ETHYLBENZENE DEHYDROGENASE; IRON; MOLYBDOPTERIN; MOLYBDOPTERIN GUANINE DINUCLEOTIDE; MUTANT PROTEIN; OXIDOREDUCTASE; POLYPEPTIDE; PROTEIN; PROTEIN DDHA; PROTEIN DDHB; PROTEIN DDHC; PROTEIN DDHD; PROTEIN NARH; PTERIN; SELENATE REDUCTASE; SIGNAL PEPTIDE; SULFUR; UNCLASSIFIED DRUG; CYTOCHROME C; DIMETHYL SULFIDE; IRON SULFUR PROTEIN; METALLOPROTEIN; MOLYBDENUM COFACTOR; NITRATE REDUCTASE; OXYGEN; PHOSPHOGLYCERATE DEHYDROGENASE; PTERIDINE DERIVATIVE; SULFIDE;

AMINO TERMINAL SEQUENCE; ARTICLE; BACTERIAL GROWTH; CATALYSIS; CONTROLLED STUDY; ELECTRON TRANSPORT; ENZYME SUBUNIT; GENE CLUSTER; HETEROTROPHY; MUTATIONAL ANALYSIS; NONHUMAN; NUCLEOTIDE SEQUENCE; OXIDATION; PHOTOCHEMISTRY; PHOTOTROPHIC BACTERIUM; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN FAMILY; PROTEIN SECRETION; RHODOVULUM SULFIDOPHILUM; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; ALPHAPROTEOBACTERIA; AMINO ACID SEQUENCE; BACTERIAL GENE; CHEMISTRY; COENZYME; ENZYMOLOGY; GENETICS; METABOLISM; MOLECULAR GENETICS; MULTIGENE FAMILY; OPERON; PHYLOGENY;

ALPHA PROTEOBACTERIA; AMINO ACID SEQUENCE; CARBOHYDRATE DEHYDROGENASES; CYTOCHROME C; ELECTRON TRANSPORT; GENES, BACTERIAL; METALLOPROTEINS; MOLECULAR SEQUENCE DATA; MULTIGENE FAMILY; NITRATE REDUCTASES; OPERON; OXIDOREDUCTASES; OXYGEN; PHOTOCHEMISTRY; PHYLOGENY; PTERIDINES; SEQUENCE HOMOLOGY, AMINO ACID; SULFIDES; ALPHAPROTEOBACTERIA; COENZYMES; CYTOCHROME C GROUP; IRON-SULFUR PROTEINS; NITRATE REDUCTASE; PHOSPHOGLYCERATE DEHYDROGENASE;

BACTERIA (MICROORGANISMS); PHOTOBACTERIA; RHODOVULUM; RHODOVULUM SULFIDOPHILUM;

EID: 0036016822     PISSN: 0950382X     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-2958.2002.02978.x     Document Type: Article

References (62)

1. The purification and characterization of arsenite oxidase from Alcali-genes faecalis, a molybdenum-containing hydroxylase
2. Site-directed mutagenesis of conserved cysteine residues within the beta subunit of Escherichia coli nitrate reductase. Physiological, biochemical, and EPR characterization of the mutated enzymes
3. Active site heterogeneity in dimethyl sulfoxide reductase from Rhodobacter capsulatus revealed by Raman spectroscopy
4. Enzymes and associated electron transport systems that catalyse the respiratory reduction of nitrogen oxides and oxyanions
5. The Tat protein export pathway
6. Nitrate reductase of Escherichia coli: Completion of the nucleotide sequence of thenar operon and reassessment of the role of the alpha and beta subunits in iron binding and electron transfer
7. Involvement of the narJ or narW gene product in the formation of active nitrate reductase in Escherichia coli
8. NarJ is a specific chaperone required for molybdenum cofactor assembly in nitrate reductase A of Escherichia coli
9. The coordination and function of the redox centres of the membrane bound nitrate reductases
10. 4 cluster
11. Oceanic phytoplankton, atmospheric sulphur, cloud albedo and climate
12. Crystal structure of oxidized trimethylamine N-oxide reductase from Shewanella massilia at 2.5 Å resolution
13. 3- type cytochrome c oxidases during respiratory growth of Rhodobacter sphaeroides
14. Crystal structure of the first dissimilatory nitrate reductase at 1.9 angstrom solved by MAD methods
15. The Sec system
16. The narJ gene product is required for biogenesis of respiratory nitrate reductase in Escherichia coli
17. Crystal structure of the 100kDa arsenite oxidase from Alcaligenes faecalis in two crystal forms at 1.64 Å and 2.03 Å
18. Resonance Raman characterization of the molybdenum center in sulfite oxidase: Identification of Mo=O stretching modes
19. Complete coordination of the four Fe-S centers of the beta subunit from Escherichia coli nitrate reductase. Physiological, biochemical, and EPR characterization of site-directed mutants lacking the highest or lowest potential [4Fe-4S] clusters
20. The association of two distinct b cytochromes with the respiratory nitrate reductase of Escherichia coli
21. Isolation and characterization of a strain of Rhodobacter sulfidophilus: A bacterium which grows autotrophically with dimethylsulphide as electron donor
22. Dimethylsulfide: Acceptor oxidore-ductase from Rhodobacter sulfidophilus: The purified enzyme contains beta-type haem and a pterin molybdenum cofactor
23. The FSSP database: Fold classification based on structure-structure alignment of proteins
24. Isolation and characterization of anaerobic ethylbenzene dehydrogenase, a novel Mo-Fe-S enzyme
25. The iron-sulfur cluster composition of Escherichia coli nitrate reductase
26. The role of c-type cytochromes in the photosynthetic electron transport pathway of Rhodobacter capsulatus
27. Close genetic relationship between Nitrobacter hamburgensis nitrite oxidoreductase and Escherichia coli nitrate reductases
28. Molybdenum-cofactor-containing enzymes: Structure and mechanism
29. A structural comparison of molybdenum cofactor-containing enzymes
30. Purification and characterization of the respiratory arsenate reductase of Chrysio-genes arsenatis
31. Cloning and sequencing of the genes encoding the periplasmic-cytochrome B-containing selenate reductase of Thauera selenatis
32. Cleavage of structural proteins during the assembly of the head of bacteriophage T4
33. The 1.3 angstrom crystal structure of Rhodobacter sphaeroides dimethyl sulfoxide reductase reveals two distinct molybdenum coordination environments
34. Characterization of NarJ, a system-specific chaperone required for nitrate reductase biogenesis in Escherichia coli
35. Molybdenum active centre of DMSO reductase from Rhodobacter capsulatus: Crystal structure of the oxidised enzyme at 1.82-angstrom resolution and the dithionite-reduced enzyme at 2.8-angstrom resolution
36. The DMSO reductase family of microbial molybdenum enzymes; molecular properties and role in the dissimilatory reduction of toxic elements
37. Heme axial ligation by the highly conserved His residues in helix II of cytochrome b (NarI) of Escherichia coli nitrate reductase A
38. Molybdenum cofactor properties and [Fe-S] cluster coordination in Escherichia coli nitrate reductase A: Investigation by site-directed mutagenesis of the conserved His-50 residue in the NarG subunit
39. Genetic characterization and sequence analysis of the duplicated nifA/nifB gene region of Rhodobacter capsulatus
40. A new cytochrome subunit bound to the photosynthetic reaction center in the purple bacterium, Rhodovulum sulfidophilum
41. Cascade regulation of dimethyl sulfoxide reductase (dor) gene expression in the facultative phototroph Rhodobacter sphaeroides 2.4.1T
42. Genetic applications of an inverse polymerase chain reaction
43. The nasB operon and nasA gene are required for nitrate/nitrite assimilation in Bacillus subtilis
44. An improved suicide vector for construction of chromosomal insertion mutations in bacteria
45. The pterin of the molybdenum cofactor
46. A crystallographic view of the molybdenum cofactor
47. 2 is essential for electron transfer to nitrous oxide reductase from physiological substrates in Rhodobacter capsulatus and can act as an electron donor to the reductasein vitro. Correlation with photoinhibition studies
48. The hemes of Escherichia coli nitrate reductase A (NarGHI): Potentiometric effects of inhibitor binding to NarI
49. Crystal structure of DMSO reductase: Redox-linked changes in molybdopterin coordination
50. The molybdenum-cofactor: A crystallographic perspective
51. Crystal structure of dimethyl sulfoxide reductase from Rhodobacter capsulatus at 1.88 Å resolution
52. Purification and characterization of the selenate reductase from Thauera selenatis
53. Measurement of protein using bicinchoninic acid
54. Characterisation of the pterin molybdenum cofactor in dimethylsulfoxide reductase of Rhodobacter capsulatus
55. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
56. Biogenesis of respiratory cytochromes in bacteria
57. Engineering a novel iron-sulfur cluster into the catalytic subunit of Escherichia coli dimethyl-sulfoxide reductase
58. A new mechanism for the aerobic catabolism of dimethyl sulfide
59. Characterisation of Rhodopseudomonas capsulata
60. Rapid similarity searches of nucleic acid and protein data banks
61. Enzymes depending on the pterin molybdenum cofactor: Sequence families, spectroscopic properties of molybdenum and possible cofactor-binding domains
62. In vitro and in vivo electron transfer to the triheme cytochrome subunit bound to the photosynthetic reaction center complex in the purple bacterium Rhodovulum sulfidophilum