DyBOBS: A dynamic biomimetic assay for odorant-binding to odor-binding protein

Chemosensory Perception

Volumn 3, Issue 2, 2010, Pages 108-117

  Yabuki, Masayuki ^a,b   Portman, Katherine L ^a   Scott, David J ^a   Briand, Loïc ^c   Taylor, Andrew J ^a  

^a UNIVERSITY OF NOTTINGHAM   (United Kingdom)

^b KAO CORPORATION   (Japan)

^c CENTRE DES SCIENCES DU GOÛT ET DE L ALIMENTATION   (France)

Author keywords

APCI MS; Binding stoichiometry; Mass transfer; OBP; Olfactory epithelium

Indexed keywords

BINDING PROTEIN; ISOBUTYLTHIAZOLE; ODORANT BINDING PROTEIN; ODORANT BINDING PROTEIN 3; THIAZOLE DERIVATIVE; UNCLASSIFIED DRUG;

ARTICLE; BIOMIMETICS; CAPILLARY FLOW; CONCENTRATION (PARAMETERS); CONTROLLED STUDY; FLOW MEASUREMENT; GAS FLOW; MASS SPECTROMETRY; ODOR; OLFACTORY RECEPTOR; ONLINE ANALYSIS; PHASE TRANSITION; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN BINDING; PROTEIN FUNCTION; STOICHIOMETRY; WATER TRANSPORT;

EID: 77955663907     PISSN: 19365802     EISSN: 19365810     Source Type: Journal    
DOI: 10.1007/s12078-010-9070-4     Document Type: Article

References (37)

1. Bingham RJ, Findlay JBC, Hsieh SY, Kalverda AP, Kjeliberg A, Perazzolo C, Phillips SEV, Seshadri K, Trinh CH, Turnbull WB, Bodenhausen G, Homans SW (2004) Thermodynamics of binding of 2-methoxy-3-isopropylpyrazine and 2-methoxy-3- isobutylpyrazine to the major urinary protein. J Am Chem Soc 126(6):1675-1681.
2. Briand L, Nespoulous C, Perez V, Remy JJ, Huet JC, Pernollet JC (2000) Ligand-binding properties and structural characterization of a novel rat odorant-binding protein variant. Eur J Biochem 267 (10):3079-3089.
3. Buettner A, Otto S, Beer A, Mestres M, Schieberle P, Hummel T (2008) Dynamics of retronasal aroma perception during consumption: cross-linking on-line breath analysis with medico-analytical tools to elucidate a complex process. Food Chem 108 (4):1234-1246.
4. Channell GA, Taylor AJ (2005) On line monitoring of the maillard reaction using a film reactor coupled to ion trap mass spectrometry. In: Weerasinghe DK, Sucan MK (eds) Process and reaction flavors, vol 905. American Chemical Society, Washington, pp 181-191.
5. Damm M, Vent J, Schmidt M, Theissen P, Eckel HE, Lotsch J, Hummel T (2002) Intranasal volume and olfactory function. Chem Senses 27(9):831-839.
6. Dijkstra G, De Goey J (1958) The use of coated capillaries as columns for gas chromatography. In: Desty DH (ed) Gas chromatography 1958. Academic, New York, pp 56-68.
7. Feng W-H, Kauer JS, Adelman L, Talamo B (1997) New structure, the "olfactory pit", in human olfactory mucosa. J Comp Neurol 378:443-453.
8. Foster JD, Getchell ML, Getchell TV (1992) Ultrastructural-localization of sialylated glycoconjugates in cells of the salamander olfactory mucosa using lectin cytochemistry. Cell Tissue Res 267(1):113-124.
9. Gill SC, Vonhippel PH (1989) Calculation of protein extinction coefficients from amino-acid sequence data. Anal Biochem 182 (2):319-326.
10. Guntherschulze J (1979) Studies about the regio olfactoria of the wild boar (Sus scrofa) and of the domestic pig (Sus scrofa domestica). Zool Anz 202(3-4):256-279.
11. Hahn I, Scherer PW, Mozell MM (1993) Velocity profiles measured for air-flow through a large-scale model of the human nasal cavity. J Appl Physiol 75(5):2273-2287.
12. Keyhani K, Scherer PW, Mozell MM (1995) Numerical simulation of airflow in the human nasal cavity. J Biomech Eng Transact ASME 117(4):429-441.
13. Kimmelman CP (1994) The risk to olfaction from nasal surgery. Laryngoscope 104(8):981-988.
14. Kurtz DB, Zhao K, Hornung DE, Scherer P (2004) Experimental and numerical determination of odorant solubility in nasal and olfactory mucosa. Chem Senses 29(9):763-773.
15. Lee ML, Wright BW (1980) Preparation of glass capillary columns for gas chromatography. J Chromatogr 184(3):235-312.
16. Linforth RST, Martin F, Carey M, Davidson JM, Taylor AJ (2002) Retronasal transport of aroma compounds. J Agric Food Chem 50:1111-1117.
17. Lobel D, Strotmann J, Jacob M, Breer H (2001) Identification of a third rat odorant-binding protein (obp3). Chem Senses 26 (6):673-680.
18. Lobel D, Jacob M, Volkner M, Breer H (2002) Odorants of different chemical classes interact with distinct odorant binding protein subtypes. Chem Senses 27(1):39-44.
19. Lovell MA, Jafek BW, Moran DT, Rowley JC (1982) Biopsy of human olfactory mucosa-an instrument and a technique. Arch Otolaryngol Head Neck Surg 108(4):247-249.
20. Marin M, Baek I, Taylor AJ (1999) Volatile release from aqueous solutions under dynamic headspace dilution conditions. J Agric Food Chem 47(11):4750-4755.
21. Menco BPM (1980) Qualitative and quantitative freeze-fracture studies on olfactory and nasal respiratory epithelial surfaces of frog, ox, rat, and dog. 2. Cell apices, cilia, and microvilli. Cell Tissue Res 211(1):5-29.
22. Moran DT, Rowley JC, Jafek BW, Lovell MA (1982) The fine-structure of the olfactory mucosa in man. J Neurocytol 11 (5):721-746.
23. Nespoulous C, Briand L, Delage MM, Tran V, Pernollet JC (2004) Odorant binding and conformational changes of a rat odorant-binding protein. Chem Senses 29(3):189-198.
24. Paolini S, Tanfani F, Fini C, Bertoli E, Pelosi P (1999) Porcine odorant-binding protein: structural stability and ligand affinities measured by Fourier-transform infrared spectroscopy and fluorescence spectroscopy. Biochim Biophys Acta Protein Struct Mol Enzymol 1431(1):179-188.
25. Pelosi P (1994) Odorant-binding proteins. Crit Rev Biochem Mol Biol 29(3):199-228.
26. Pelosi P (1996) Perireceptor events in olfaction. J Neurobiol 30(1):3- 19.
27. Pelosi P, Maida R (1990) Odorant-binding proteins in vertebrates and insects: similarities and possible common function. Chem Senses 15(2):205-215.
28. Pelosi P, Tirindelli R (1989) Structure/activity studies and characterization of an odorant-binding protein. In: Brand JG, Teeter JH, Cagan RH, Kare MR (eds) Chemical senses: vol. 1: receptor events and transduction in taste and olfaction. Marcel Dekker, New York, pp 207-226.
29. Pernollet J-C, Briand L (2004) Structural recognition between odorants, olfactory-binding proteins and olfactory receptors-first events in odour coding. In: Taylor AJ, Roberts DD (eds) Flavor perception. Blackwell, Oxford, pp 86-150.
30. Reese TS (1965) Olfactory cilia in frog. J Cell Biol 25(2P2):209-230.
31. Steinbrecht RA (1998) Odorant-binding proteins: expression and function. Ann N Y Acad Sci 855:323-332.
32. Taylor AJ, Linforth RST (2003) Direct mass spectrometry of complex volatile and non-volatile flavour mixtures. Int J Mass Spectrom 223-224:179-191.
33. Taylor AJ, Cook DJ, Scott DJ (2008) Role of odor binding protein: comparing hypothetical mechanisms with experimental data. Chemosens Percept 1:153-162.
34. Tcatchoff L, Nespoulous C, Pernollet JC, Briand L (2006) A single lysyl residue defines the binding specificity of a human odorant-binding protein for aldehydes. FEBS Lett 580(8):2102-2108.
35. Vidic J, Grosclaude J, Monnerie R, Persuy MA, Badonnel K, Baly C, Caillol M, Briand L, Salesse R, Pajot-Augy E (2008) On a chip demonstration of a functional role for odorant binding protein in the preservation of olfactory receptor activity at high odorant concentration. Lab Chip 8(5):678-688.
36. White SA, Briand L, Scott DJ, Borysik AJ (2009) Structure of rat odorant-binding protein obp1 at 1.6 angstrom resolution. Acta Crystallogr D Biol Crystallogr 65:403-410.
37. Wright J, Wulfert F, Hort J, Taylor AJ (2007) Effect of preparation conditions on release of selected volatiles in tea headspace. J Agric Food Chem 55:1445-1453.