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Volumn 107, Issue 25, 2010, Pages 11319-11324

A potential role for initiator-tRNA in pre-mRNA splicing regulation

Author keywords

5 splice site; Alternative splicing; Premature termination codon; Spliceosome; Suppression of splicing

Indexed keywords

MESSENGER RNA PRECURSOR; TRANSFER RNA; AMINO ACID; METHIONINE; RNA PRECURSOR;

EID: 77954948738     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.0911561107     Document Type: Article
Times cited : (20)

References (32)
  • 1
    • 42449098125 scopus 로고    scopus 로고
    • Splicing regulation: From a parts list of regulatory elements to an integrated splicing code
    • Wang Z, Burge CB (2008) Splicing regulation: From a parts list of regulatory elements to an integrated splicing code. RNA 14:802-813.
    • (2008) RNA , vol.14 , pp. 802-813
    • Wang, Z.1    Burge, C.B.2
  • 2
    • 12244289270 scopus 로고    scopus 로고
    • Conservation of an open-reading frame as an element affecting 5′ splice site selection
    • Miriami E, Motro U, Sperling J, Sperling R (2002) Conservation of an open-reading frame as an element affecting 5′ splice site selection. J Struct Biol 140:116-122.
    • (2002) J Struct Biol , vol.140 , pp. 116-122
    • Miriami, E.1    Motro, U.2    Sperling, J.3    Sperling, R.4
  • 3
    • 0347623203 scopus 로고    scopus 로고
    • Regulation of splicing: The importance of being translatable
    • Miriami E, Sperling R, Sperling J, Motro U (2004) Regulation of splicing: The importance of being translatable. RNA 10:1-4.
    • (2004) RNA , vol.10 , pp. 1-4
    • Miriami, E.1    Sperling, R.2    Sperling, J.3    Motro, U.4
  • 4
    • 57349162135 scopus 로고    scopus 로고
    • Nuclear surveillance of RNA polymerase II transcripts
    • Sperling J, Sperling R (2008) Nuclear surveillance of RNA polymerase II transcripts. RNA Biol 5:220-224.
    • (2008) RNA Biol , vol.5 , pp. 220-224
    • Sperling, J.1    Sperling, R.2
  • 5
    • 0028071845 scopus 로고
    • Heat shock affects 5′ splice site selection, cleavage and ligation of CAD pre-mRNA in hamster cells, but not its packaging in lnRNP particles
    • Miriami E, Sperling J, Sperling R (1994) Heat shock affects 5′ splice site selection, cleavage and ligation of CAD pre-mRNA in hamster cells, but not its packaging in lnRNP particles. Nucleic Acids Res 22:3084-3091.
    • (1994) Nucleic Acids Res , vol.22 , pp. 3084-3091
    • Miriami, E.1    Sperling, J.2    Sperling, R.3
  • 6
    • 0037117623 scopus 로고    scopus 로고
    • Stop codons affect 5′ splice site selection by surveillance of splicing
    • Li B, et al. (2002) Stop codons affect 5′ splice site selection by surveillance of splicing. Proc Natl Acad Sci USA 99:5277-5282.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 5277-5282
    • Li, B.1
  • 7
    • 7044227587 scopus 로고    scopus 로고
    • Stop codon-mediated suppression of splicing is a novel nuclear scanning mechanism not affected by elements of protein synthesis and NMD
    • Wachtel C, Li B, Sperling J, Sperling R (2004) Stop codon-mediated suppression of splicing is a novel nuclear scanning mechanism not affected by elements of protein synthesis and NMD. RNA 10:1740-1750.
    • (2004) RNA , vol.10 , pp. 1740-1750
    • Wachtel, C.1    Li, B.2    Sperling, J.3    Sperling, R.4
  • 8
    • 33746835444 scopus 로고    scopus 로고
    • AUG sequences are required to sustain nonsense-codon-mediated suppression of splicing
    • Kamhi E, et al. (2006) AUG sequences are required to sustain nonsense-codon-mediated suppression of splicing. Nucleic Acids Res 34:3421-3433.
    • (2006) Nucleic Acids Res , vol.34 , pp. 3421-3433
    • Kamhi, E.1
  • 9
    • 34247197937 scopus 로고    scopus 로고
    • The nonsense-mediated decay RNA surveillance pathway
    • Chang YF, Imam JS, Wilkinson MF (2007) The nonsense-mediated decay RNA surveillance pathway. Annu Rev Biochem 76:51-74.
    • (2007) Annu Rev Biochem , vol.76 , pp. 51-74
    • Chang, Y.F.1    Imam, J.S.2    Wilkinson, M.F.3
  • 10
    • 34547623918 scopus 로고    scopus 로고
    • Quality control of eukaryotic mRNA: Safeguarding cells from abnormal mRNA function
    • Isken O, Maquat LE (2007) Quality control of eukaryotic mRNA: Safeguarding cells from abnormal mRNA function. Genes Dev 21:1833-1856.
    • (2007) Genes Dev , vol.21 , pp. 1833-1856
    • Isken, O.1    Maquat, L.E.2
  • 11
    • 0037064145 scopus 로고    scopus 로고
    • Separable roles for rent1/hUpf1 in altered splicing and decay of nonsense transcripts
    • Mendell JT, ap Rhys CMJ, Dietz HC (2002) Separable roles for rent1/hUpf1 in altered splicing and decay of nonsense transcripts. Science 298:419-422.
    • (2002) Science , vol.298 , pp. 419-422
    • Mendell, J.T.1    Ap Rhys, C.M.J.2    Dietz, H.C.3
  • 12
    • 31344454049 scopus 로고    scopus 로고
    • Native spliceosomes assemble with pre-mRNA to form supraspliceosomes
    • Azubel M, Habib N, Sperling J, Sperling R (2006) Native spliceosomes assemble with pre-mRNA to form supraspliceosomes. J Mol Biol 356:955-966.
    • (2006) J Mol Biol , vol.356 , pp. 955-966
    • Azubel, M.1    Habib, N.2    Sperling, J.3    Sperling, R.4
  • 13
    • 4444233084 scopus 로고    scopus 로고
    • Three-dimensional structure of the native spliceosome by cryo-electron microscopy
    • Azubel M, Wolf SG, Sperling J, Sperling R (2004) Three-dimensional structure of the native spliceosome by cryo-electron microscopy. Mol Cell 15:833-839.
    • (2004) Mol Cell , vol.15 , pp. 833-839
    • Azubel, M.1    Wolf, S.G.2    Sperling, J.3    Sperling, R.4
  • 14
    • 0035498939 scopus 로고    scopus 로고
    • Hierarchical phosphorylation of the translation inhibitor 4E-BP1
    • Gingras AC, et al. (2001) Hierarchical phosphorylation of the translation inhibitor 4E-BP1. Genes Dev 15:2852-2864.
    • (2001) Genes Dev , vol.15 , pp. 2852-2864
    • Gingras, A.C.1
  • 15
    • 13444259647 scopus 로고    scopus 로고
    • Regulation of cap-dependent translation by eIF4E inhibitory proteins
    • Richter JD, Sonenberg N (2005) Regulation of cap-dependent translation by eIF4E inhibitory proteins. Nature 433:477-480.
    • (2005) Nature , vol.433 , pp. 477-480
    • Richter, J.D.1    Sonenberg, N.2
  • 16
    • 0032509304 scopus 로고    scopus 로고
    • Proofreading and aminoacylation of tRNAs before export from the nucleus
    • Lund E, Dahlberg JE (1998) Proofreading and aminoacylation of tRNAs before export from the nucleus. Science 282:2082-2085.
    • (1998) Science , vol.282 , pp. 2082-2085
    • Lund, E.1    Dahlberg, J.E.2
  • 17
    • 0021100683 scopus 로고
    • Base substitutions in the wobble position of the anticodon inhibit aminoacylation of E. coli tRNAfMet by E. coli Met-tRNA synthetase
    • Schulman LH, Pelka H, Susani M (1983) Base substitutions in the wobble position of the anticodon inhibit aminoacylation of E. coli tRNAfMet by E. coli Met-tRNA synthetase. Nucleic Acids Res 11:1439-1455.
    • (1983) Nucleic Acids Res , vol.11 , pp. 1439-1455
    • Schulman, L.H.1    Pelka, H.2    Susani, M.3
  • 18
    • 0026468969 scopus 로고
    • The anticodon triplet is not sufficient to confer methionine acceptance to a transfer RNA
    • Senger B, Despons L, Walter P, Fasiolo F (1992) The anticodon triplet is not sufficient to confer methionine acceptance to a transfer RNA. Proc Natl Acad Sci USA 89:10768-10771.
    • (1992) Proc Natl Acad Sci USA , vol.89 , pp. 10768-10771
    • Senger, B.1    Despons, L.2    Walter, P.3    Fasiolo, F.4
  • 19
    • 0029760302 scopus 로고    scopus 로고
    • Functional interaction of syntaxin and SNAP-25 with voltage-sensitive L- and N-type Ca2+ channels
    • Wiser O, Bennett MK, Atlas D (1996) Functional interaction of syntaxin and SNAP-25 with voltage-sensitive L- and N-type Ca2+ channels. EMBO J 15:4100-4110.
    • (1996) EMBO J , vol.15 , pp. 4100-4110
    • Wiser, O.1    Bennett, M.K.2    Atlas, D.3
  • 20
    • 0027423265 scopus 로고
    • The role of nucleotides conserved in eukaryotic initiator methionine tRNAs in initiation of protein synthesis
    • Drabkin HJ, Helk B, RajBhandary UL (1993) The role of nucleotides conserved in eukaryotic initiator methionine tRNAs in initiation of protein synthesis. J Biol Chem 268:25221-25228.
    • (1993) J Biol Chem , vol.268 , pp. 25221-25228
    • Drabkin, H.J.1    Helk, B.2    RajBhandary, U.L.3
  • 21
    • 69949167078 scopus 로고    scopus 로고
    • Genome-wide analysis of tRNA charging and activation of the eIF2 kinase Gcn2p
    • Zaborske JM, et al. (2009) Genome-wide analysis of tRNA charging and activation of the eIF2 kinase Gcn2p. J Biol Chem 284:25254-25267.
    • (2009) J Biol Chem , vol.284 , pp. 25254-25267
    • Zaborske, J.M.1
  • 22
    • 30944449484 scopus 로고    scopus 로고
    • Quantitative microarray profiling provides evidence against widespread coupling of alternative splicing with nonsense-mediated mRNA decay to control gene expression
    • Pan Q, et al. (2006) Quantitative microarray profiling provides evidence against widespread coupling of alternative splicing with nonsense-mediated mRNA decay to control gene expression. Genes Dev 20:153-158.
    • (2006) Genes Dev , vol.20 , pp. 153-158
    • Pan, Q.1
  • 23
    • 2342640073 scopus 로고    scopus 로고
    • Does protein synthesis occur in the nucleus?
    • Dahlberg JE, Lund E (2004) Does protein synthesis occur in the nucleus? Curr Opin Cell Biol 16:335-338.
    • (2004) Curr Opin Cell Biol , vol.16 , pp. 335-338
    • Dahlberg, J.E.1    Lund, E.2
  • 24
    • 0033614097 scopus 로고    scopus 로고
    • The tobacco mosaic virus particle: Structure and assembly
    • Klug A (1999) The tobacco mosaic virus particle: structure and assembly. Philos Trans R Soc London B 354:531-535.
    • (1999) Philos Trans R Soc London B , vol.354 , pp. 531-535
    • Klug, A.1
  • 25
    • 0032701795 scopus 로고    scopus 로고
    • Zinc finger peptides for the regulation of gene expression
    • Klug A (1999) Zinc finger peptides for the regulation of gene expression. J Mol Biol 293:215-218.
    • (1999) J Mol Biol , vol.293 , pp. 215-218
    • Klug, A.1
  • 26
    • 0034956770 scopus 로고    scopus 로고
    • Structure and assembly of the spliceosomal snRNPs. Novartis Medal Lecture
    • Nagai K, et al. (2001) Structure and assembly of the spliceosomal snRNPs. Novartis Medal Lecture. Biochem Soc Trans 29:15-26.
    • (2001) Biochem Soc Trans , vol.29 , pp. 15-26
    • Nagai, K.1
  • 27
    • 43249119932 scopus 로고    scopus 로고
    • Modifications target spliceosome dynamics
    • Maeder C, Guthrie C (2008) Modifications target spliceosome dynamics. Nat Struct Mol Biol 15:426-428.
    • (2008) Nat Struct Mol Biol , vol.15 , pp. 426-428
    • Maeder, C.1    Guthrie, C.2
  • 28
    • 60349104299 scopus 로고    scopus 로고
    • The spliceosome: Design principles of a dynamic RNP machine
    • Wahl MC, Will CL, Lührmann R (2009) The spliceosome: Design principles of a dynamic RNP machine. Cell 136:701-718.
    • (2009) Cell , vol.136 , pp. 701-718
    • Wahl, M.C.1    Will, C.L.2    Lührmann, R.3
  • 29
    • 58149235016 scopus 로고    scopus 로고
    • Eye on RNA unwinding
    • Brow DA (2009) Eye on RNA unwinding. Nat Struct Mol Biol 16:7-8.
    • (2009) Nat Struct Mol Biol , vol.16 , pp. 7-8
    • Brow, D.A.1
  • 30
    • 60749134015 scopus 로고    scopus 로고
    • Assembly of ribosomes and spliceosomes: Complex ribonucleoprotein machines
    • Staley JP, Woolford JL, Jr (2009) Assembly of ribosomes and spliceosomes: complex ribonucleoprotein machines. Curr Opin Cell Biol 21:109-118.
    • (2009) Curr Opin Cell Biol , vol.21 , pp. 109-118
    • Staley, J.P.1    Woolford Jr., J.L.2
  • 31
    • 0035912725 scopus 로고    scopus 로고
    • Molecular mechanisms of translation initiation in eukaryotes
    • Pestova TV, et al. (2001) Molecular mechanisms of translation initiation in eukaryotes. Proc Natl Acad Sci USA 98:7029-7036.
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 7029-7036
    • Pestova, T.V.1
  • 32
    • 0035811009 scopus 로고    scopus 로고
    • RNA editing activity is associated with splicing factors in lnRNP particles: The nuclear pre-mRNA processing machinery
    • Raitskin O, Cho DS, Sperling J, Nishikura K, Sperling R (2001) RNA editing activity is associated with splicing factors in lnRNP particles: The nuclear pre-mRNA processing machinery. Proc Natl Acad Sci USA 98:6571-6576.
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 6571-6576
    • Raitskin, O.1    Cho, D.S.2    Sperling, J.3    Nishikura, K.4    Sperling, R.5


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