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Volumn 186, Issue 2, 2010, Pages 415-428

The transcriptome of Populus in elevated CO2 reveals increased anthocyanin biosynthesis during delayed autumnal senescence

Author keywords

Anthocyanin biosynthesis; Autumnal senescence; cDNA microarray; Elevated CO2; LDOX; Populus

Indexed keywords

BIOASSAY; CARBON DIOXIDE; DECIDUOUS TREE; ENZYME ACTIVITY; GENE EXPRESSION; GENETIC ANALYSIS; LONGEVITY; METABOLISM; MOLECULAR ANALYSIS; PHYSIOLOGICAL RESPONSE; PIGMENT; PLANTATION; QUANTITATIVE ANALYSIS; SENESCENCE; TEMPERATURE EFFECT;

EID: 77954708859     PISSN: 0028646X     EISSN: 14698137     Source Type: Journal    
DOI: 10.1111/j.1469-8137.2010.03184.x     Document Type: Article
Times cited : (72)

References (73)
  • 4
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: a practical and powerful approach to multiple testing
    • (Methodological)
    • Benjamini Y, Hochberg Y. 1995. Controlling the false discovery rate: a practical and powerful approach to multiple testing. Journal of the Royal Statistical Society. Series B (Methodological) 57: 289-300.
    • (1995) Journal of the Royal Statistical Society. Series B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 9
    • 21144449190 scopus 로고    scopus 로고
    • Comparartive transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis
    • Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin J-F, Wu S-H, Swidzinski J, Ishizaki K et al. 2005. Comparartive transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant Journal 42: 567-585.
    • (2005) Plant Journal , vol.42 , pp. 567-585
    • Buchanan-Wollaston, V.1    Page, T.2    Harrison, E.3    Breeze, E.4    Lim, P.O.5    Nam, H.G.6    Lin, J.-F.7    Wu, S.-H.8    Swidzinski, J.9    Ishizaki, K.10
  • 10
    • 51249169259 scopus 로고
    • A simple and efficient method for isolating RNA from pine trees
    • Chang S, Puryear J, Cairney J. 1993. A simple and efficient method for isolating RNA from pine trees. Plant Molecular Biology Reporter 11: 113-116.
    • (1993) Plant Molecular Biology Reporter , vol.11 , pp. 113-116
    • Chang, S.1    Puryear, J.2    Cairney, J.3
  • 13
    • 33744959499 scopus 로고    scopus 로고
    • Can fast-growing plantation trees escape biochemical down-regulation of photosynthesis when grown throughout their complete production cycle in the open air under elevated carbon dioxide?
    • Davey PA, Olcer H, Zakhleniuk O, Bernacchi CJ, Calfapietra C, Long SP, Raines CA. 2006. Can fast-growing plantation trees escape biochemical down-regulation of photosynthesis when grown throughout their complete production cycle in the open air under elevated carbon dioxide? Plant, Cell & Environment 29: 1235-1244.
    • (2006) Plant, Cell & Environment , vol.29 , pp. 1235-1244
    • Davey, P.A.1    Olcer, H.2    Zakhleniuk, O.3    Bernacchi, C.J.4    Calfapietra, C.5    Long, S.P.6    Raines, C.A.7
  • 14
    • 1442266566 scopus 로고    scopus 로고
    • Expressed Sequence Tags from poplar wood tissues -a comparative analysis from multiple libraries
    • Déjardin A, Leplé J-C, Lesage-Descauses M-C, Costa G, Pilate G. 2004. Expressed Sequence Tags from poplar wood tissues -a comparative analysis from multiple libraries. Plant Biology 6: 55-64.
    • (2004) Plant Biology , vol.6 , pp. 55-64
    • Déjardin, A.1    Leplé, J.-C.2    Lesage-Descauses, M.-C.3    Costa, G.4    Pilate, G.5
  • 17
    • 22144492269 scopus 로고    scopus 로고
    • The biological limitations of transcriptomics in elucidating stress and stress responses
    • Feder ME, Walser JC. 2005. The biological limitations of transcriptomics in elucidating stress and stress responses. Journal of Evolutionary Biology 18: 901-910.
    • (2005) Journal of Evolutionary Biology , vol.18 , pp. 901-910
    • Feder, M.E.1    Walser, J.C.2
  • 19
    • 0032815356 scopus 로고    scopus 로고
    • Assessing leaf pigment content and activity with a reflectometer
    • Gamon JA, Surfus JS. 1999. Assessing leaf pigment content and activity with a reflectometer. New Phytologist 143: 105-117.
    • (1999) New Phytologist , vol.143 , pp. 105-117
    • Gamon, J.A.1    Surfus, J.S.2
  • 21
    • 0028150408 scopus 로고
    • Spectral reflectance changes associated with autumn senescence of Aesculus-Hippocastanum L and Acer-Platanoides L leaves -spectral features and relation to chlorophyll estimation
    • Gitelson AA, Merzlyak MN. 1994. Spectral reflectance changes associated with autumn senescence of Aesculus-Hippocastanum L and Acer-Platanoides L leaves -spectral features and relation to chlorophyll estimation. Journal of Plant Physiology 143: 286-292.
    • (1994) Journal of Plant Physiology , vol.143 , pp. 286-292
    • Gitelson, A.A.1    Merzlyak, M.N.2
  • 22
    • 15244346247 scopus 로고    scopus 로고
    • Natures Swiss army knife: the diverse protective roles of anthocyanins in leaves
    • Gould KS. 2004. Natures Swiss army knife: the diverse protective roles of anthocyanins in leaves. Journal of Biomedicine and Biotechnology 5: 314-320.
    • (2004) Journal of Biomedicine and Biotechnology , vol.5 , pp. 314-320
    • Gould, K.S.1
  • 23
    • 30444459812 scopus 로고    scopus 로고
    • Functional genomics analysis of foliar condensed tannin and phenolic glycoside regulation in natural cottonwood hybrids
    • Harding SA, Jiang H, Jeong ML, Casado FL, Lin H-W, Tsai C-J. 2005. Functional genomics analysis of foliar condensed tannin and phenolic glycoside regulation in natural cottonwood hybrids. Tree Physiology 25: 1475-1486.
    • (2005) Tree Physiology , vol.25 , pp. 1475-1486
    • Harding, S.A.1    Jiang, H.2    Jeong, M.L.3    Casado, F.L.4    Lin, H.-W.5    Tsai, C.-J.6
  • 25
    • 0037305824 scopus 로고    scopus 로고
    • Leaf senescence and late-season net photosynthesis of sun and shade leaves of overstory sweetgum (Liquidambar styraciflua) grown in elevated and ambient carbon dioxide concentrations
    • Herrick JD, Thomas RB. 2003. Leaf senescence and late-season net photosynthesis of sun and shade leaves of overstory sweetgum (Liquidambar styraciflua) grown in elevated and ambient carbon dioxide concentrations. Tree Physiology 23: 109-118.
    • (2003) Tree Physiology , vol.23 , pp. 109-118
    • Herrick, J.D.1    Thomas, R.B.2
  • 26
    • 33645229343 scopus 로고    scopus 로고
    • Clinal variation in phyB2, a candidate gene for day-lengh induced growth cessation and bud set, across a latitudinal gradient in European aspen (Populus tremula)
    • Ingvarsson PK, Garcia MV, Hall D, Luquez V, Jansson S. 2006. Clinal variation in phyB2, a candidate gene for day-lengh induced growth cessation and bud set, across a latitudinal gradient in European aspen (Populus tremula). Genetics 172: 1845-1853.
    • (2006) Genetics , vol.172 , pp. 1845-1853
    • Ingvarsson, P.K.1    Garcia, M.V.2    Hall, D.3    Luquez, V.4    Jansson, S.5
  • 34
    • 33846233095 scopus 로고    scopus 로고
    • 2 enrichment and fertilization is sustained across a closed Populus canopy profile (EUROFACE)
    • 2 enrichment and fertilization is sustained across a closed Populus canopy profile (EUROFACE). New Phytologist 173: 537-549.
    • (2007) New Phytologist , vol.173 , pp. 537-549
    • Liberloo, M.1    Tulva, I.2    Raïm, O.3    Ceulemans, R.4
  • 35
    • 2942560476 scopus 로고    scopus 로고
    • Responses of primary and secondary metabolism to sugar accumulation revealed by microarray expression analysis of the Arabidopsis mutant, pho3
    • Lloyd JC, Zakhleniuk OV. 2004. Responses of primary and secondary metabolism to sugar accumulation revealed by microarray expression analysis of the Arabidopsis mutant, pho3. Journal of Experimental Botany 55: 1221-1230.
    • (2004) Journal of Experimental Botany , vol.55 , pp. 1221-1230
    • Lloyd, J.C.1    Zakhleniuk, O.V.2
  • 38
    • 85047685360 scopus 로고    scopus 로고
    • Arabidopsis seedling growth, storage lipid mobilization, and photosynthetic gene expression are regulated by carbon: nitrogen availability
    • Martin T, Oswald O, Graham IA. 2002. Arabidopsis seedling growth, storage lipid mobilization, and photosynthetic gene expression are regulated by carbon: nitrogen availability. Plant Physiology 128: 472-481.
    • (2002) Plant Physiology , vol.128 , pp. 472-481
    • Martin, T.1    Oswald, O.2    Graham, I.A.3
  • 39
    • 33645087124 scopus 로고    scopus 로고
    • 2 concentrations leads to modified profiles of secondary metabolites in tobacco cv. SamsunNN and to increased resistance against infection with potato virus Y. Plant
    • 2 concentrations leads to modified profiles of secondary metabolites in tobacco cv. SamsunNN and to increased resistance against infection with potato virus Y. Plant, Cell & Environment 29: 126-137.
    • (2006) Cell & Environment , vol.29 , pp. 126-137
    • Matros, A.1    Amme, S.2    Kettig, B.3    Buck-Sorlin, G.H.4    Sonnewald, U.5    Mock, H.-P.6
  • 40
    • 28044458935 scopus 로고    scopus 로고
    • 2 enrichment and carbon partitioning to phenolics: do plant responses accord better with the protein competition or the growth-differentiation balance models?
    • 2 enrichment and carbon partitioning to phenolics: do plant responses accord better with the protein competition or the growth-differentiation balance models? Oikos 111: 337-347.
    • (2005) Oikos , vol.111 , pp. 337-347
    • Mattson, W.J.1    Julkunen-Tiitto, R.2    Herms, D.A.3
  • 41
    • 0001860519 scopus 로고
    • Deterioration of membranes during aging in plants: evidence for free radical mediation
    • Noodén LD, Leopold AC, eds. London, UK: Academic Press Inc
    • McKersie BD, Senaratna T, Walker MA, Kendall EJ, Hetherington PR. 1988. Deterioration of membranes during aging in plants: evidence for free radical mediation. In: Noodén LD, Leopold AC, eds. Senescence and aging in plants. London, UK: Academic Press Inc. 442-464.
    • (1988) Senescence and aging in plants , pp. 442-464
    • McKersie, B.D.1    Senaratna, T.2    Walker, M.A.3    Kendall, E.J.4    Hetherington, P.R.5
  • 42
    • 77956785075 scopus 로고    scopus 로고
    • Free-air carbon dioxide enrichment (FACE) in global change research: a review
    • McLeod AR, Long SP. 1999. Free-air carbon dioxide enrichment (FACE) in global change research: a review. Advances in Ecological Research 28: 1-56.
    • (1999) Advances in Ecological Research , vol.28 , pp. 1-56
    • McLeod, A.R.1    Long, S.P.2
  • 43
    • 0033602188 scopus 로고    scopus 로고
    • Growing season extended in Europe
    • Menzel A, Fabian P. 1999. Growing season extended in Europe. Nature 397: 659.
    • (1999) Nature , vol.397 , pp. 659
    • Menzel, A.1    Fabian, P.2
  • 46
    • 54949143270 scopus 로고    scopus 로고
    • Stem girdling manipulates leaf sugar concentrations and anthocyanin expression in sugar maple trees during autumn
    • Murakami PF, Schaberg PG, Shane JB. 2008. Stem girdling manipulates leaf sugar concentrations and anthocyanin expression in sugar maple trees during autumn. Tree Physiology 28: 1467-1473.
    • (2008) Tree Physiology , vol.28 , pp. 1467-1473
    • Murakami, P.F.1    Schaberg, P.G.2    Shane, J.B.3
  • 47
    • 0030619096 scopus 로고    scopus 로고
    • Increased plant growth in the northern high latitudes from 1981 to 1991
    • Myneni RB, Keeling CD, Tucker CJ, Asrar G, Nemani RR. 1997. Increased plant growth in the northern high latitudes from 1981 to 1991. Nature 386: 698-702.
    • (1997) Nature , vol.386 , pp. 698-702
    • Myneni, R.B.1    Keeling, C.D.2    Tucker, C.J.3    Asrar, G.4    Nemani, R.R.5
  • 48
    • 0031434649 scopus 로고    scopus 로고
    • Ecotpic expression of oat phytochrome A in hybrid aspen changes critical daylength for growth and prevents cold acclimatization
    • Olsen JE, Junttila O, Nilsen J, Eriksson ME, Martinussen I, Olsson O, Sandberg G, Moritz T. 1997. Ecotpic expression of oat phytochrome A in hybrid aspen changes critical daylength for growth and prevents cold acclimatization. Plant Journal 12: 1339-1350.
    • (1997) Plant Journal , vol.12 , pp. 1339-1350
    • Olsen, J.E.1    Junttila, O.2    Nilsen, J.3    Eriksson, M.E.4    Martinussen, I.5    Olsson, O.6    Sandberg, G.7    Moritz, T.8
  • 50
    • 0037413628 scopus 로고    scopus 로고
    • A globally coherent fingerprint of climate change impacts across natural systems
    • Parmesan C, Yohe G. 2003. A globally coherent fingerprint of climate change impacts across natural systems. Nature 421: 37-42.
    • (2003) Nature , vol.421 , pp. 37-42
    • Parmesan, C.1    Yohe, G.2
  • 51
    • 66149140645 scopus 로고    scopus 로고
    • Phenology feedbacks on climate change
    • Peñuelas J, Rutishauser T, Filella I. 2009. Phenology feedbacks on climate change. Science 324: 887-888.
    • (2009) Science , vol.324 , pp. 887-888
    • Peñuelas, J.1    Rutishauser, T.2    Filella, I.3
  • 54
    • 33748487811 scopus 로고    scopus 로고
    • Increased carbon availability at elevated carbon dioxide concentration improves nitrogen assimilation in a legume
    • Rogers A, Gibon Y, Stitt M, Morgan PB, Bernacchi CJ, Ort DR, Long SP. 2006. Increased carbon availability at elevated carbon dioxide concentration improves nitrogen assimilation in a legume. Plant, Cell & Environment 29: 1651-1658.
    • (2006) Plant, Cell & Environment , vol.29 , pp. 1651-1658
    • Rogers, A.1    Gibon, Y.2    Stitt, M.3    Morgan, P.B.4    Bernacchi, C.J.5    Ort, D.R.6    Long, S.P.7
  • 57
    • 46649109923 scopus 로고    scopus 로고
    • Association of red coloration with senescence of sugar maple leaves in autumn
    • Schaberg PG, Murakami PF, Turner MR, Heitz HK, Hawley GJ. 2008. Association of red coloration with senescence of sugar maple leaves in autumn. Trees 22: 573-578.
    • (2008) Trees , vol.22 , pp. 573-578
    • Schaberg, P.G.1    Murakami, P.F.2    Turner, M.R.3    Heitz, H.K.4    Hawley, G.J.5
  • 58
    • 0035160767 scopus 로고    scopus 로고
    • 2 and nutrient status modified leaf phenology and growth rhythm of young Populus trichocarpa trees in a 3-year field study
    • 2 and nutrient status modified leaf phenology and growth rhythm of young Populus trichocarpa trees in a 3-year field study. Trees-Structure and Function 15: 403-413.
    • (2001) Trees-Structure and Function , vol.15 , pp. 403-413
    • Sigurdsson, B.D.1
  • 59
    • 65549102151 scopus 로고    scopus 로고
    • The Populus Genome Integrative Explorer (PopGenIE): a new resource for exploring the Populus genome
    • Sjödin A, Street NR, Sandberg G, Gustafsson P, Jansson S. 2009. The Populus Genome Integrative Explorer (PopGenIE): a new resource for exploring the Populus genome. New Phytologist 182: 1013-1025.
    • (2009) New Phytologist , vol.182 , pp. 1013-1025
    • Sjödin, A.1    Street, N.R.2    Sandberg, G.3    Gustafsson, P.4    Jansson, S.5
  • 60
    • 4544341015 scopus 로고    scopus 로고
    • Linear models and empirical Bayes methods for assessing differential expression in microarray experiments
    • Article
    • Smyth GK. 2004. Linear models and empirical Bayes methods for assessing differential expression in microarray experiments. Statistical Applications in Genetics and Molecular Biology 3: No. 1, Article 3.
    • (2004) Statistical Applications in Genetics and Molecular Biology , vol.3 , Issue.1 , pp. 3
    • Smyth, G.K.1
  • 61
    • 33646838073 scopus 로고    scopus 로고
    • Sucrose-specific induction of the anthocyanin biosynthetic pathway in Arabidopsis
    • Solfanelli C, Poggi A, Loreti E, Alpi A, Perata P. 2006. Sucrose-specific induction of the anthocyanin biosynthetic pathway in Arabidopsis. Plant Physiology 140: 637-646.
    • (2006) Plant Physiology , vol.140 , pp. 637-646
    • Solfanelli, C.1    Poggi, A.2    Loreti, E.3    Alpi, A.4    Perata, P.5
  • 63
    • 0036898429 scopus 로고    scopus 로고
    • Populus. Arabidopsis for forestry. Do we need a model tree?
    • Taylor G. 2002. Populus. Arabidopsis for forestry. Do we need a model tree? Annals of Botany 90: 681-689.
    • (2002) Annals of Botany , vol.90 , pp. 681-689
    • Taylor, G.1
  • 66
    • 33644999271 scopus 로고    scopus 로고
    • Sucrose-specific induction of anthocyanin biosynthesis in Arabidopsis requires the MYB75/PAP1 gene
    • Teng S, Keurentjes J, Bentsink L, Koornneef M, Smeekens S. 2005. Sucrose-specific induction of anthocyanin biosynthesis in Arabidopsis requires the MYB75/PAP1 gene. Plant Physiology 139: 1840-1852.
    • (2005) Plant Physiology , vol.139 , pp. 1840-1852
    • Teng, S.1    Keurentjes, J.2    Bentsink, L.3    Koornneef, M.4    Smeekens, S.5
  • 67
  • 69
    • 33747770767 scopus 로고    scopus 로고
    • Genome-wide analysis of the structural genes regulating defense phenylpropanoid metabolism in Populus
    • Tsai C-J, Harding SA, Tschaplinski TJ, Lindroth RL, Yuan Y. 2006. Genome-wide analysis of the structural genes regulating defense phenylpropanoid metabolism in Populus. New Phytologist 172: 47-62.
    • (2006) New Phytologist , vol.172 , pp. 47-62
    • Tsai, C.-J.1    Harding, S.A.2    Tschaplinski, T.J.3    Lindroth, R.L.4    Yuan, Y.5
  • 71
    • 1042267098 scopus 로고    scopus 로고
    • Spatial patterns and metabolic regulation of photosynthetic parameters during leaf senescence
    • Wingler A, Mares M, Pourtau N. 2004. Spatial patterns and metabolic regulation of photosynthetic parameters during leaf senescence. New Phytologist 161: 781-789.
    • (2004) New Phytologist , vol.161 , pp. 781-789
    • Wingler, A.1    Mares, M.2    Pourtau, N.3
  • 72
    • 30344451059 scopus 로고    scopus 로고
    • The role of sugars in integrating environmental signals during the regulation of leaf senescence
    • Wingler A, Purdy S, MacLean JA, Pourtau N. 2006. The role of sugars in integrating environmental signals during the regulation of leaf senescence. Journal of Experimental Botany 57: 391-399.
    • (2006) Journal of Experimental Botany , vol.57 , pp. 391-399
    • Wingler, A.1    Purdy, S.2    MacLean, J.A.3    Pourtau, N.4


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