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Volumn 38, Issue SUPPL. 2, 2010, Pages

SeLOX-a locus of recombination site search tool for the detection and directed evolution of site-specific recombination systems

Author keywords

[No Author keywords available]

Indexed keywords

CRE RECOMBINASE; RECOMBINASE; INTEGRASE;

EID: 77954265331     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkq523     Document Type: Article
Times cited : (17)

References (23)
  • 1
    • 32844468662 scopus 로고    scopus 로고
    • Mammalian genome targeting using site-specific recombinases
    • Garcia-Otin,A.L. and Guillou,F. (2006) Mammalian genome targeting using site-specific recombinases. Front. Biosci., 11, 1108-1136.
    • (2006) Front. Biosci. , vol.11 , pp. 1108-1136
    • Garcia-Otin, A.L.1    Guillou, F.2
  • 2
    • 0033557147 scopus 로고    scopus 로고
    • A general model for site-specific recombination by the integrase family recombinases
    • Voziyanov,Y., Pathania,S. and Jayaram,M. (1999) A general model for site-specific recombination by the integrase family recombinases. Nucleic Acids Res., 27, 930-941.
    • (1999) Nucleic Acids Res , vol.27 , pp. 930-941
    • Voziyanov, Y.1    Pathania, S.2    Jayaram, M.3
  • 3
    • 0034991483 scopus 로고    scopus 로고
    • A structural view of cre-loxp site-specific recombination
    • Van Duyne,G.D. (2001) A structural view of cre-loxp site-specific recombination. Ann. Rev. Biophys. Biomol. Struct., 30, 87-104.
    • (2001) Ann. Rev. Biophys. Biomol. Struct. , vol.30 , pp. 87-104
    • Van Duyne, G.D.1
  • 4
    • 0034754491 scopus 로고    scopus 로고
    • Alteration of Cre recombinase site specificity by substrate-linked protein evolution
    • Buchholz,F. and Stewart,A.F. (2001) Alteration of Cre recombinase site specificity by substrate-linked protein evolution. Nat. Biotechnol., 19, 1047-1052.
    • (2001) Nat. Biotechnol. , vol.19 , pp. 1047-1052
    • Buchholz, F.1    Stewart, A.F.2
  • 5
    • 34347398120 scopus 로고    scopus 로고
    • HIV-1 proviral DNA excision using an evolved recombinase
    • Sarkar,I., Hauber,I., Hauber,J. and Buchholz,F. (2007) HIV-1 proviral DNA excision using an evolved recombinase. Science, 316, 1912-1915.
    • (2007) Science , vol.316 , pp. 1912-1915
    • Sarkar, I.1    Hauber, I.2    Hauber, J.3    Buchholz, F.4
  • 7
    • 0032518266 scopus 로고    scopus 로고
    • DNA shuffling of a family of genes from diverse species accelerates directed evolution
    • Crameri,A., Raillard,S.A., Bermudez,E. and Stemmer,W.P. (1998) DNA shuffling of a family of genes from diverse species accelerates directed evolution. Nature, 391, 288-291.
    • (1998) Nature , vol.391 , pp. 288-291
    • Crameri, A.1    Raillard, S.A.2    Bermudez, E.3    Stemmer, W.P.4
  • 8
    • 0031743421 scopus 로고    scopus 로고
    • Profile hidden Markov models
    • Eddy,S.R. (1998) Profile hidden Markov models. Bioinformatics, 14, 755-763.
    • (1998) Bioinformatics , vol.14 , pp. 755-763
    • Eddy, S.R.1
  • 9
    • 43349107538 scopus 로고    scopus 로고
    • Using RepeatMasker to identify repetitive elements in genomic sequences
    • Chapter 4 Unit 4. 10
    • Chen,N. (2004) Using RepeatMasker to identify repetitive elements in genomic sequences. Curr. Protoc. Bioinform., Chapter 4: Unit 4.10.
    • (2004) Curr. Protoc. Bioinform.
    • Chen, N.1
  • 10
    • 0034201441 scopus 로고    scopus 로고
    • EMBOSS: the European Molecular Biology Open Software Suite
    • Rice,P., Longden,I. and Bleasby,A. (2000) EMBOSS: the European Molecular Biology Open Software Suite. Trends Genet., 16, 276-277.
    • (2000) Trends Genet , vol.16 , pp. 276-277
    • Rice, P.1    Longden, I.2    Bleasby, A.3
  • 12
    • 56649119162 scopus 로고    scopus 로고
    • Specific alignment of structured RNA: stochastic grammars and sequence annealing
    • Bradley,R.K., Pachter,L. and Holmes,I. (2008) Specific alignment of structured RNA: stochastic grammars and sequence annealing. Bioinformatics, 24, 2677-2683.
    • (2008) Bioinformatics , vol.24 , pp. 2677-2683
    • Bradley, R.K.1    Pachter, L.2    Holmes, I.3
  • 13
    • 0024378286 scopus 로고
    • The FLP recombinase of yeast catalyzes site-specific recombination in the Drosophila genome
    • Golic,K.G. and Lindquist,S. (1989) The FLP recombinase of yeast catalyzes site-specific recombination in the Drosophila genome. Cell, 59, 499-509.
    • (1989) Cell , vol.59 , pp. 499-509
    • Golic, K.G.1    Lindquist, S.2
  • 14
    • 0034705105 scopus 로고    scopus 로고
    • A phage integrase directs efficient site-specific integration in human cells
    • Groth,A.C., Olivares,E.C., Thyagarajan,B. and Calos,M.P. (2000) A phage integrase directs efficient site-specific integration in human cells. Proc. Natl Acad. Sci. USA, 97, 5995-6000.
    • (2000) Proc. Natl Acad. Sci. USA , vol.97 , pp. 5995-6000
    • Groth, A.C.1    Olivares, E.C.2    Thyagarajan, B.3    Calos, M.P.4
  • 15
    • 0031278917 scopus 로고    scopus 로고
    • A circular plasmid from the yeast Torulaspora delbrueckii
    • Blaisonneau,J., Sor,F., Cheret,G., Yarrow,D. and Fukuhara,H. (1997) A circular plasmid from the yeast Torulaspora delbrueckii. Plasmid, 38, 202-209.
    • (1997) Plasmid , vol.38 , pp. 202-209
    • Blaisonneau, J.1    Sor, F.2    Cheret, G.3    Yarrow, D.4    Fukuhara, H.5
  • 16
    • 0343415768 scopus 로고    scopus 로고
    • Mammalian genomes contain active recombinase recognition sites
    • Thyagarajan,B., Guimaraes,M.J., Groth,A.C. and Calos,M.P. (2000) Mammalian genomes contain active recombinase recognition sites. Gene, 244, 47-54.
    • (2000) Gene , vol.244 , pp. 47-54
    • Thyagarajan, B.1    Guimaraes, M.J.2    Groth, A.C.3    Calos, M.P.4
  • 17
    • 80052257378 scopus 로고    scopus 로고
    • Implication of the env gene of the human endogenous retrovirus W family in the expression of BDNF and DRD3 and development of recent-onset Schizophrenia
    • doi:10.1093/schbul/sbp166 [25 January 2010, Epub ahead of print]
    • Huang,W., Li,S., Hu,Y., Yu,H., Luo,F., Zhang,Q. and Zhu,F. (2010) Implication of the env gene of the human endogenous retrovirus W family in the expression of BDNF and DRD3 and development of recent-onset Schizophrenia. Schizophr. Bull., doi:10.1093/schbul/sbp166 [25 January 2010, Epub ahead of print].
    • (2010) Schizophr. Bull.
    • Huang, W.1    Li, S.2    Hu, Y.3    Yu, H.4    Luo, F.5    Zhang, Q.6    Zhu, F.7
  • 19
    • 74149094792 scopus 로고    scopus 로고
    • The prevalence of human endogenous retroviruses in cerebrospinal fluids from patients with sporadic Creutzfeldt-Jakob disease
    • Jeong,B.H., Lee,Y.J., Carp,R.I. and Kim,Y.S. The prevalence of human endogenous retroviruses in cerebrospinal fluids from patients with sporadic Creutzfeldt-Jakob disease. J. Clin. Virol., 47, 136-142.
    • J. Clin. Virol. , vol.47 , pp. 136-142
    • Jeong, B.H.1    Lee, Y.J.2    Carp, R.I.3    Kim, Y.S.4
  • 20
    • 0029938821 scopus 로고    scopus 로고
    • The viruses in all of us: characteristics and biological significance of human endogenous retrovirus sequences
    • Lower,R., Lower,J. and Kurth,R. (1996) The viruses in all of us: characteristics and biological significance of human endogenous retrovirus sequences. Proc. Natl Acad. Sci. USA, 93, 5177-5184.
    • (1996) Proc. Natl Acad. Sci. USA , vol.93 , pp. 5177-5184
    • Lower, R.1    Lower, J.2    Kurth, R.3
  • 21
    • 39749200830 scopus 로고    scopus 로고
    • Haplotypes of the HRES-1 endogenous retrovirus are associated with development and disease manifestations of systemic lupus erythematosus
    • Pullmann,R. Jr, Bonilla,E., Phillips,P.E., Middleton,F.A. and Perl,A. (2008) Haplotypes of the HRES-1 endogenous retrovirus are associated with development and disease manifestations of systemic lupus erythematosus. Arthritis Rheum., 58, 532-540.
    • (2008) Arthritis Rheum , vol.58 , pp. 532-540
    • Pullmann R., Jr.1    Bonilla, E.2    Phillips, P.E.3    Middleton, F.A.4    Perl, A.5
  • 22
    • 77954090016 scopus 로고    scopus 로고
    • The human endogenous retrovirus link between genes and environment in multiple sclerosis and in multifactorial diseases associating neuroinflammation
    • [21 August 2009, Epub ahead of print]
    • Perron,H. and Lang,A. (2009) The human endogenous retrovirus link between genes and environment in multiple sclerosis and in multifactorial diseases associating neuroinflammation. Clin. Rev. Allergy Immunol., [21 August 2009, Epub ahead of print].
    • (2009) Clin. Rev. Allergy Immunol.
    • Perron, H.1    Lang, A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.