-
1
-
-
0024798757
-
Intracellular fatty acid trafficking and the role of cytosolic lipid binding proteins
-
Matarese V et al (1989) Intracellular fatty acid trafficking and the role of cytosolic lipid binding proteins. Prog Lipid Res 28(4):245-272.
-
(1989)
Prog Lipid Res
, vol.28
, Issue.4
, pp. 245-272
-
-
Matarese, V.1
-
2
-
-
0026098687
-
Structural and functional features of different types of cytoplasmic fatty acid-binding proteins
-
Veerkamp JH, Peeters RA, Maatman RG (1991) Structural and functional features of different types of cytoplasmic fatty acid-binding proteins. Biochim Biophys Acta 1081(1):1-24.
-
(1991)
Biochim Biophys Acta
, vol.1081
, Issue.1
, pp. 1-24
-
-
Veerkamp, J.H.1
Peeters, R.A.2
Maatman, R.G.3
-
3
-
-
0028260307
-
Lipid-binding proteins: A family of fatty acid and retinoid transport proteins
-
Banaszak L et al (1994) Lipid-binding proteins: a family of fatty acid and retinoid transport proteins. Adv Protein Chem 45:89-151.
-
(1994)
Adv Protein Chem
, vol.45
, pp. 89-151
-
-
Banaszak, L.1
-
4
-
-
0003055733
-
Fatty acid-binding proteins. Chronological description and discussion of hypotheses involving their molecular evolution
-
Santome JA et al (1998) Fatty acid-binding proteins. Chronological description and discussion of hypotheses involving their molecular evolution. Comp Biochem Physiol Res Trends 4:23-38.
-
(1998)
Comp Biochem Physiol Res Trends
, vol.4
, pp. 23-38
-
-
Santome, J.A.1
-
5
-
-
50949128339
-
The emerging functions and mechanisms of mammalian fatty acid-binding proteins
-
Storch J, Corsico B (2008) The emerging functions and mechanisms of mammalian fatty acid-binding proteins. Annu Rev Nutr 28:73-95.
-
(2008)
Annu Rev Nutr
, vol.28
, pp. 73-95
-
-
Storch, J.1
Corsico, B.2
-
6
-
-
0037489430
-
Structural and biochemical characterization of toad liver fatty acid-binding protein
-
Di Pietro SM et al (2003) Structural and biochemical characterization of toad liver fatty acid-binding protein. Biochemistry 42 (27):8192-8203.
-
(2003)
Biochemistry
, vol.42
, Issue.27
, pp. 8192-8203
-
-
Di Pietro, S.M.1
-
7
-
-
8444248261
-
Crystal structure of chicken liver basic fatty acid-binding protein complexed with cholic acid
-
Nichesola D et al (2004) Crystal structure of chicken liver basic fatty acid-binding protein complexed with cholic acid. Biochemistry 43(44):14072-14079.
-
(2004)
Biochemistry
, vol.43
, Issue.44
, pp. 14072-14079
-
-
Nichesola, D.1
-
8
-
-
0033430089
-
Functional and conformational characterization of new mutants of heart fatty acid-binding protein
-
Zimmerman AW et al (1999) Functional and conformational characterization of new mutants of heart fatty acid-binding protein. Biochem J 344:495-501.
-
(1999)
Biochem J
, vol.344
, pp. 495-501
-
-
Zimmerman, A.W.1
-
9
-
-
0036634367
-
New insights into the structure and function of fatty acid-binding proteins
-
Zimmerman AW, Veerkamp JH (2002) New insights into the structure and function of fatty acid-binding proteins. Cell Mol Life Sci 59:1096-1116.
-
(2002)
Cell Mol Life Sci
, vol.59
, pp. 1096-1116
-
-
Zimmerman, A.W.1
Veerkamp, J.H.2
-
10
-
-
0030033066
-
Role of portal region lysine residues in electrostatic interactions between heart fatty acid binding protein and phospholipid membranes
-
Herr FM, Aronson J, Storch J (1996) Role of portal region lysine residues in electrostatic interactions between heart fatty acid binding protein and phospholipid membranes. Biochemistry 35 (4):1296-1303.
-
(1996)
Biochemistry
, vol.35
, Issue.4
, pp. 1296-1303
-
-
Herr, F.M.1
Aronson, J.2
Storch, J.3
-
11
-
-
0030942576
-
Biochemical and crystallographic analyses of a portal mutant of the adipocyte lipid-binding protein
-
Ory J et al (1997) Biochemical and crystallographic analyses of a portal mutant of the adipocyte lipid-binding protein. J Biol Chem 272(15):9793-9801.
-
(1997)
J Biol Chem
, vol.272
, Issue.15
, pp. 9793-9801
-
-
Ory, J.1
-
12
-
-
0035916274
-
Deletion of the helical motif in the intestinal fatty acid-binding protein reduces its interactions with membrane monolayers: Brewster angle microscopy, IR reflection-absorption spectroscopy, and surface pressure studies
-
Wu F et al (2001) Deletion of the helical motif in the intestinal fatty acid-binding protein reduces its interactions with membrane monolayers: Brewster angle microscopy, IR reflection-absorption spectroscopy, and surface pressure studies. Biochemistry 40(7):1976-1983.
-
(2001)
Biochemistry
, vol.40
, Issue.7
, pp. 1976-1983
-
-
Wu, F.1
-
13
-
-
0037065668
-
Testing of the portal hypothesis: analysis of a V32G, F57G, K58G mutant of the fatty acid binding protein of the murine adipocyte
-
Jenkins AE et al (2002) Testing of the portal hypothesis: analysis of a V32G, F57G, K58G mutant of the fatty acid binding protein of the murine adipocyte. Biochemistry 41(6):2022-2027.
-
(2002)
Biochemistry
, vol.41
, Issue.6
, pp. 2022-2027
-
-
Jenkins, A.E.1
-
14
-
-
34548451229
-
Modeling fatty acid delivery from intestinal fatty acid binding protein to a membrane
-
Mihajlovic M, Lazaridis T (2007) Modeling fatty acid delivery from intestinal fatty acid binding protein to a membrane. Protein Sci 16(9):2042-2055.
-
(2007)
Protein Sci
, vol.16
, Issue.9
, pp. 2042-2055
-
-
Mihajlovic, M.1
Lazaridis, T.2
-
15
-
-
12144289741
-
The alpha-helical domain of liver fatty acid binding protein is responsible for the diffusion-mediated transfer of fatty acids to phospholipid membranes
-
Corsico B, Liou HL, Storch J (2004) The alpha-helical domain of liver fatty acid binding protein is responsible for the diffusion-mediated transfer of fatty acids to phospholipid membranes. Biochemistry 43(12):3600-3607.
-
(2004)
Biochemistry
, vol.43
, Issue.12
, pp. 3600-3607
-
-
Corsico, B.1
Liou, H.L.2
Storch, J.3
-
16
-
-
0032787619
-
Structure and dynamics of the fatty acid binding cavity in apo rat intestinal fatty acid binding protein
-
Likic VA, Prendergast FG (1999) Structure and dynamics of the fatty acid binding cavity in apo rat intestinal fatty acid binding protein. Protein Sci 8(8):1649-1657.
-
(1999)
Protein Sci
, vol.8
, Issue.8
, pp. 1649-1657
-
-
Likic, V.A.1
Prendergast, F.G.2
-
17
-
-
17744410109
-
Insights into binding of fatty acids by fatty acid binding proteins
-
Hanhoff T, Lucke C, Spener F (2002) Insights into binding of fatty acids by fatty acid binding proteins. Mol Cell Biochem 239 (1-2):45-54.
-
(2002)
Mol Cell Biochem
, vol.239
, Issue.1-2
, pp. 45-54
-
-
Hanhoff, T.1
Lucke, C.2
Spener, F.3
-
18
-
-
0038746860
-
Solution structure of human intestinal fatty acid binding protein with a naturally-occurring single amino acid substitution (A54T) that is associated with altered lipid metabolism
-
Zhang FL et al (2003) Solution structure of human intestinal fatty acid binding protein with a naturally-occurring single amino acid substitution (A54T) that is associated with altered lipid metabolism. Biochemistry 42(24):7339-7347.
-
(2003)
Biochemistry
, vol.42
, Issue.24
, pp. 7339-7347
-
-
Zhang, F.L.1
-
19
-
-
26044469044
-
An improved method for the purification of rat liver-type fatty acid binding protein from Escherichia coli
-
Velkov T et al (2005) An improved method for the purification of rat liver-type fatty acid binding protein from Escherichia coli. Protein Expr Purif 44(1):23-31.
-
(2005)
Protein Expr Purif
, vol.44
, Issue.1
, pp. 23-31
-
-
Velkov, T.1
-
20
-
-
46849121138
-
Characterization of the drug binding specificity of rat liver fatty acid binding protein
-
Chuang S et al (2008) Characterization of the drug binding specificity of rat liver fatty acid binding protein. J Med Chem 51 (13):3755-3764.
-
(2008)
J Med Chem
, vol.51
, Issue.13
, pp. 3755-3764
-
-
Chuang, S.1
-
21
-
-
0036306105
-
Simulations of apo and holo-fatty acid binding protein: structure and dynamics of protein, ligand and internal water
-
Bakowies D, van Gunsteren WF (2002) Simulations of apo and holo-fatty acid binding protein: structure and dynamics of protein, ligand and internal water. J Mol Biol 315(4):713-736.
-
(2002)
J Mol Biol
, vol.315
, Issue.4
, pp. 713-736
-
-
Bakowies, D.1
Van Gunsteren, W.F.2
-
22
-
-
0036606442
-
Water in protein cavities: a procedure to identify internal water and exchange pathways and application to fatty acid-binding protein
-
Bakowies D, van Gunsteren WF (2002) Water in protein cavities: a procedure to identify internal water and exchange pathways and application to fatty acid-binding protein. Proteins 47(4):534-545.
-
(2002)
Proteins
, vol.47
, Issue.4
, pp. 534-545
-
-
Bakowies, D.1
Van Gunsteren, W.F.2
-
23
-
-
15544381165
-
Molecular dynamics simulations of the adipocyte lipid binding protein reveal a novel entry site for the ligand
-
Friedman R, Nachliel E, Gutman M (2005) Molecular dynamics simulations of the adipocyte lipid binding protein reveal a novel entry site for the ligand. Biochemistry 44:4275-4283.
-
(2005)
Biochemistry
, vol.44
, pp. 4275-4283
-
-
Friedman, R.1
Nachliel, E.2
Gutman, M.3
-
24
-
-
33646147148
-
Fatty acid binding proteins: same structure but different binding mechanisms? Molecular dynamics simulations of intestinal fatty acid binding protein
-
Friedman R, Nachliel E, Gutman M (2006) Fatty acid binding proteins: same structure but different binding mechanisms? Molecular dynamics simulations of intestinal fatty acid binding protein. Biophys J 90(5):1535-1545.
-
(2006)
Biophys J
, vol.90
, Issue.5
, pp. 1535-1545
-
-
Friedman, R.1
Nachliel, E.2
Gutman, M.3
-
25
-
-
0034024888
-
A "structural" water molecule in the family of fatty acid binding proteins
-
Likic VA et al (2000) A "structural" water molecule in the family of fatty acid binding proteins. Protein Sci 9(3):497-504.
-
(2000)
Protein Sci
, vol.9
, Issue.3
, pp. 497-504
-
-
Likic, V.A.1
-
26
-
-
0035314045
-
Dynamics of internal water in fatty acid binding protein: computer simulations and comparison with experiments
-
Likic VA, Prendergast FG (2001) Dynamics of internal water in fatty acid binding protein: computer simulations and comparison with experiments. Proteins 43(1):65-72.
-
(2001)
Proteins
, vol.43
, Issue.1
, pp. 65-72
-
-
Likic, V.A.1
Prendergast, F.G.2
-
27
-
-
32544450943
-
The pH-dependent unfolding mechanism of P2 myelin protein: an experimental and computational study
-
Polverini E et al (2006) The pH-dependent unfolding mechanism of P2 myelin protein: an experimental and computational study. J Struct Biol 153(3):253-263.
-
(2006)
J Struct Biol
, vol.153
, Issue.3
, pp. 253-263
-
-
Polverini, E.1
-
28
-
-
0030043243
-
Molecular dynamics simulations of adipocyte lipid-binding protein: effect of electrostatics and acyl chain unsaturation
-
Rich MR, Evans JS (1996) Molecular dynamics simulations of adipocyte lipid-binding protein: effect of electrostatics and acyl chain unsaturation. Biochemistry 35(5):1506-1515.
-
(1996)
Biochemistry
, vol.35
, Issue.5
, pp. 1506-1515
-
-
Rich, M.R.1
Evans, J.S.2
-
29
-
-
33847760345
-
Molecular dynamics simulations of palmitate entry into the hydrophobic pocket of the fatty acid binding protein
-
Tsfadia Y et al (2007) Molecular dynamics simulations of palmitate entry into the hydrophobic pocket of the fatty acid binding protein. FEBS Lett 581(6):1243-1247.
-
(2007)
FEBS Lett
, vol.581
, Issue.6
, pp. 1243-1247
-
-
Tsfadia, Y.1
-
30
-
-
43849106790
-
Binding and interactions of L-BABP to lipid membranes studied by molecular dynamic simulations
-
Villarreal MA et al (2008) Binding and interactions of L-BABP to lipid membranes studied by molecular dynamic simulations. Biochim Biophys Acta 1778(6):1390-1397.
-
(2008)
Biochim Biophys Acta
, vol.1778
, Issue.6
, pp. 1390-1397
-
-
Villarreal, M.A.1
-
31
-
-
4444323489
-
Solvation forces on biomolecular structures: a comparison of explicit solvent and Poisson-Boltzmann models
-
Wagoner J, Baker NA (2004) Solvation forces on biomolecular structures: a comparison of explicit solvent and Poisson-Boltzmann models. J Comput Chem 25(13):1623-1629.
-
(2004)
J Comput Chem
, vol.25
, pp. 1623-1629
-
-
Wagoner, J.1
Baker, N.A.2
-
32
-
-
0031927462
-
Simulations of fatty acid-binding proteins suggest sites important for function. I. Stearic acid
-
Woolf TB (1998) Simulations of fatty acid-binding proteins suggest sites important for function. I. Stearic acid. Biophys J 74:681-693.
-
(1998)
Biophys J
, vol.74
, pp. 681-693
-
-
Woolf, T.B.1
-
33
-
-
0034076542
-
Differences between apo and three holo forms of the intestinal fatty acid binding protein seen by molecular dynamics computer calculations
-
Woolf TB, Grossfield A, Tychko M (2000) Differences between apo and three holo forms of the intestinal fatty acid binding protein seen by molecular dynamics computer calculations. Biophys J 78(2):608-625.
-
(2000)
Biophys J
, vol.78
, Issue.2
, pp. 608-625
-
-
Woolf, T.B.1
Grossfield, A.2
Tychko, M.3
-
34
-
-
0031904722
-
Simulations of fatty acid-binding proteins. II. Sites for discrimination of monounsaturated ligands
-
Woolf TB, Tychko M (1998) Simulations of fatty acid-binding proteins. II. Sites for discrimination of monounsaturated ligands. Biophys J 74(2):694-707.
-
(1998)
Biophys J
, vol.74
, Issue.2
, pp. 694-707
-
-
Woolf, T.B.1
Tychko, M.2
-
35
-
-
0028092978
-
A possible route for the release of fatty acid from fatty acid-binding protein
-
Zanotti G, Feltre L, Spadon P (1994) A possible route for the release of fatty acid from fatty acid-binding protein. Biochem J 301(Pt 2):459-463.
-
(1994)
Biochem J
, vol.301
, Issue.PART 2
, pp. 459-463
-
-
Zanotti, G.1
Feltre, L.2
Spadon, P.3
-
36
-
-
34548227363
-
Molecular insight into the interaction between IFABP and PA by using MM-PBSA and alanine scanning methods
-
Zou H et al (2007) Molecular insight into the interaction between IFABP and PA by using MM-PBSA and alanine scanning methods. J Phys Chem B 111(30):9104-9113.
-
(2007)
J Phys Chem B
, vol.111
, Issue.30
, pp. 9104-9113
-
-
Zou, H.1
-
37
-
-
67349282399
-
Molecular dynamics study of the interaction between fatty acid binding proteins with palmitate mini-micelles
-
Levin LB et al (2009) Molecular dynamics study of the interaction between fatty acid binding proteins with palmitate mini-micelles. Mol Cell Biochem 326(1-2):29-33.
-
(2009)
Mol Cell Biochem
, vol.326
, Issue.1-2
, pp. 29-33
-
-
Levin, L.B.1
-
38
-
-
0023547909
-
Protein binding of palmitate measured by transmembrane diffusion through polyethylene
-
Moran JB et al (1987) Protein binding of palmitate measured by transmembrane diffusion through polyethylene. Anal Biochem 167(2):394-399.
-
(1987)
Anal Biochem
, vol.167
, Issue.2
, pp. 394-399
-
-
Moran, J.B.1
-
40
-
-
0035789518
-
Gromacs 3.0: a package for molecular simulation and trajectory analysis
-
Lindahl E, Hess B, van der Spoel D (2001) Gromacs 3.0: a package for molecular simulation and trajectory analysis. J Mol Model 7:306-317.
-
(2001)
J Mol Model
, vol.7
, pp. 306-317
-
-
Lindahl, E.1
Hess, B.2
Van Der Spoel, D.3
-
42
-
-
4444282928
-
A biomolecular force field based on the free enthalpy of hydration and solvation: the GROMOS force-field parameter sets 53A5 and 53A6
-
Oostenbrink C et al (2004) A biomolecular force field based on the free enthalpy of hydration and solvation: the GROMOS force-field parameter sets 53A5 and 53A6. J Comput Chem 25(13):1656-1676.
-
(2004)
J Comput Chem
, vol.25
, Issue.13
, pp. 1656-1676
-
-
Oostenbrink, C.1
-
43
-
-
0033954256
-
The protein data bank
-
Berman HM et al (2000) The protein data bank. Nucleic Acids Res 28(1):235-242.
-
(2000)
Nucleic Acids Res
, vol.28
, Issue.1
, pp. 235-242
-
-
Berman, H.M.1
-
44
-
-
7544226311
-
PRODRG: A tool for high-throughput crystallography of protein-ligand complexes
-
Schuttelkopf AW, van Aalten DM (2004) PRODRG: a tool for high-throughput crystallography of protein-ligand complexes. Acta Crystallogr D Biol Crystallogr 60(Pt 8):1355-1363.
-
(2004)
Acta Crystallogr D Biol Crystallogr
, vol.60
, Issue.PART 8
, pp. 1355-1363
-
-
Schuttelkopf, A.W.1
Van Aalten, D.M.2
-
45
-
-
15544371572
-
Interaction models for water in relation to protein hydration
-
Berendsen HJC et al (1969) Interaction models for water in relation to protein hydration. Nature 224:175-177.
-
(1969)
Nature
, vol.224
, pp. 175-177
-
-
Berendsen, H.J.C.1
-
46
-
-
0000388705
-
LINCS: a linear constraint solver for molecular simulations
-
Hess B et al (1997) LINCS: a linear constraint solver for molecular simulations. J Comp Chem 18:1463-1472.
-
(1997)
J Comp Chem
, vol.18
, pp. 1463-1472
-
-
Hess, B.1
-
47
-
-
84986440341
-
SETTLE: an analytical version of the SHAKE and RATTLE algorithms for rigid water models
-
Miyamoto S, Kollman PA (1992) SETTLE: an analytical version of the SHAKE and RATTLE algorithms for rigid water models. J Comp Chem 13:952-962.
-
(1992)
J Comp Chem
, vol.13
, pp. 952-962
-
-
Miyamoto, S.1
Kollman, P.A.2
-
48
-
-
33750587438
-
Molecular dynamics with coupling to an external bath
-
Berendsen HJC et al (1984) Molecular dynamics with coupling to an external bath. J Chem Phys 81:3684-3690.
-
(1984)
J Chem Phys
, vol.81
, pp. 3684-3690
-
-
Berendsen, H.J.C.1
-
49
-
-
33645961739
-
A smooth particle mesh Ewald method
-
Essman U et al (1995) A smooth particle mesh Ewald method. J Chem Phys 103:8577-8592.
-
(1995)
J Chem Phys
, vol.103
, pp. 8577-8592
-
-
Essman, U.1
-
50
-
-
0029878720
-
VMD: visual molecular dynamics
-
33-38
-
Humphrey W, Dalke A, Schulten K (1996) VMD: visual molecular dynamics. J Mol Graph 14(1):27-28, 33-38.
-
(1996)
J Mol Graph
, vol.14
, Issue.1
, pp. 27-28
-
-
Humphrey, W.1
Dalke, A.2
Schulten, K.3
-
51
-
-
1942505775
-
The NMR structure of a stable and compact all-beta-sheet variant of intestinal fatty acidbinding protein
-
Ogbay B, Dekoster GT, Cistola DP (2004) The NMR structure of a stable and compact all-beta-sheet variant of intestinal fatty acidbinding protein. Protein Sci 13(5):1227-1237.
-
(2004)
Protein Sci
, vol.13
, Issue.5
, pp. 1227-1237
-
-
Ogbay, B.1
Dekoster, G.T.2
Cistola, D.P.3
|