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Proteins: Structure, Function and Genetics

Volumn 43, Issue 1, 2001, Pages 65-72

Dynamics of internal water in fatty acid binding protein: Computer simulations and comparison with experiments

(2) Likić, Vladimir A a Prendergast, Franklyn G a

a MAYO CLINIC (United States)

Author keywords

Buried water; I FABP; Internal water cluster; MD simulations; Protein hydration

Indexed keywords

FATTY ACID; FATTY ACID BINDING PROTEIN; WATER;

ARTICLE; BETA SHEET; COMPUTER MODEL; COMPUTER SIMULATION; CRYSTAL STRUCTURE; DISPERSION; HYDRATION; MOLECULAR DYNAMICS; MOLECULAR INTERACTION; PREDICTION; PRIORITY JOURNAL; PROTEIN STRUCTURE; SOLVATION; STRUCTURE ANALYSIS; X RAY CRYSTALLOGRAPHY;

ANIMALS; CARRIER PROTEINS; COMPUTER SIMULATION; FATTY ACID-BINDING PROTEINS; INTESTINES; NEOPLASM PROTEINS; NERVE TISSUE PROTEINS; PROTEIN CONFORMATION; PROTEIN STRUCTURE, SECONDARY; RATS; WATER;

EID: 0035314045 PISSN: 08873585 EISSN: None Source Type: Journal
DOI: 10.1002/1097-0134(20010401)43:1<65::AID-PROT1018>3.0.CO;2-F Document Type: Article

Times cited : (32)

References (29)

1
- 0026098687
- Structural and functional features of different types of cytoplasmic fatty acid-binding proteins
- (1991) Biochim Biophys Acta , vol.1081 , pp. 1-24
- Veerkamp, J.H.¹ Peeters, R.A.² Maatman, R.G.H.J.³

2
- 0023082983
- The metabolic significance of mammalian fatty-acid-binding proteins: Abundant proteins in search of a function
- (1987) Ann Rev Nutr , vol.7 , pp. 337-359
- Sweetser, D.A.¹ Heuckeroth, R.O.² Gordon, J.I.³

3
- 0028260307
- Lipid-binding proteins: A family of fatty acid and retinoid transport proteins
- (1994) Adv Prot Chem , vol.45 , pp. 89-150
- Banaszak, L.¹ Winter, N.² Xu, Z.³ Bernlohr, D.A.⁴ Cowan, S.⁵ Jones, T.A.⁶

4
- 0023051843
- Internal cavities and buried waters in globular proteins
- (1986) Biochemistry , vol.25 , pp. 3619-3625
- Rashin, A.A.¹ Iofin, M.² Honig, B.³

5
- 0028274954
- Intramolecular cavities in globular proteins
- (1994) Protein Eng , vol.7 , pp. 613-626
- Hubbard, S.J.¹ Gross, K.-H.² Argos, P.³

6
- 0028095182
- Buried waters and internal cavities in monomeric proteins
- (1994) Prot Sci , vol.3 , pp. 1224-1235
- Williams, M.A.¹ Goodfellow, J.M.² Thornton, J.M.³

7
- 0026326956
- Protein hydration in aqueous solution
- (1991) Science , vol.254 , pp. 974-980
- Otting, G.¹ Liepinsh, E.² Wüthrich, K.³

8
- 0029994817
- Using buried water molecules to explore the energy landscape of proteins
- (1996) Nature Struct Biol , vol.3 , pp. 506-509
- Denisov, V.P.¹ Peters, J.² Horlein, H.D.³ Halle, B.⁴

9
- 0030325741
- Protein hydration dynamics in aqueous solution
- (1996) Faraday Discuss , vol.103 , pp. 227-244
- Denisov, V.P.¹ Halle, B.²

10
- 0030604702
- Hydration and DNA recognition by homeodomains
- (1996) Cell , vol.85 , pp. 1057-1065
- Billeter, M.¹ Güntert, P.² Luginbühl, P.³ Wüthrich, K.⁴

11
- 0003525155
- New York: John Wiley & Sons
- (1988) Proteins: A theoretical perspective of dynamics, structure and thermodynamics
- Brooks III, C.L.¹ Karplus, M.² Pettitt, B.M.³

12
- 0003927323
- Cambridge: Cambridge University Press
- (1987) Dynamics of proteins and nucleic acids
- McCammon, J.A.¹ Harvey, S.C.²

13
- 84985468629
- Hydrogen bond and internal solvent dynamics of BPTI protein
- (1981) Ann NY Acad Sci , vol.367 , pp. 162-176
- Levitt, M.¹

14
- 33845279288
- Molecular dynamics simulation of interfacial water structure and dynamics in parvalbumin solution
- (1988) J Am Chem Soc , vol.110 , pp. 4198-4203
- Ahlstrom, P.¹ Teleman, O.² Jonsson, B.³

15
- 0024354001
- Solvent effects of protein motion and protein effects on solvent motion
- (1989) J Mol Biol , vol.208 , pp. 159-181
- Brooks III, C.L.¹ Karplus, M.²

16
- 0027304152
- Hydration of proteins: A comparison of experimental residence times of water molecules solvating the bovine pancreatic trypsin inhibitor with theoretical model calculations
- (1993) J Mol Biol , vol.231 , pp. 1040-1048
- Brunne, R.M.¹ Liepinsh, E.² Otting, G.³ Wüthrich, K.⁴ Van Gunsteren, W.F.⁵

17
- 0033548262
- 2h magnetic relaxation dispersion
- (1999) J Mol Biol , vol.286 , pp. 233-246
- Wiesner, S.¹ Kurian, E.² Prendergast, F.G.³ Halle, B.⁴

18
- 0034024888
- A "structural" water molecule in the family of fatty acid binding proteins
- (2000) Prot Sci , vol.9 , pp. 1-8
- Likić, V.A.¹ Juranic, N.² Macura, S.³ Prendergast, F.G.⁴

19
- 0032006812
- Bound water in apo and holo bovine heart fatty-acid-binding protein determined by heteronuclear NMR spectroscopy
- (1998) Eur J Biochem , vol.251 , pp. 781-786
- Mesgarzadeh, A.¹ Pfeiffer, S.² Engelke, J.³ Lassen, D.⁴ Rüterjans, H.⁵

20
- 0026712235
- Refinement of the structure of recombinant rat intestinal fatty acid-binding apoprotein at 1.2-Å resolution
- (1992) J Biol Chem , vol.267 , pp. 4253-4269
- Scapin, G.¹ Gordon, J.I.² Sacchettini, J.C.³

21
- 84986512474
- CHARMM: A program for macromolecular energy, minimization, and dynamics calculations
- (1983) J Comp Chem , vol.4 , pp. 187-217
- Brooks, B.R.¹ Bruccoleri, R.E.² Olafson, B.D.³ States, D.J.⁴ Swaminathan, S.⁵ Karplus, M.⁶

22
- 0027995683
- Detection, delineation, measurement and display of cavities in macromolecular structures
- (1994) Acta Cryst , vol.50 D , pp. 178-185
- Kleywegt, G.J.¹ Jones, T.A.²

23
- 0032787619
- Structure and dynamics of the fatty acid binding cavity in apo rat intestinal fatty acid binding protein
- (1999) Prot Sci , vol.8 , pp. 1649-1657
- Likić, V.A.¹ Prendergast, F.G.²

24
- 0001463498
- Fluctuation, relaxations, and hydration in liquid water, hydrogen-bond rearrangement dynamics
- (1993) Chem Rev , vol.93 , pp. 2545-2566
- Ohmine, I.¹ Tanaka, H.²

25
- 0027244075
- Rat intestinal fatty acid binding protein
- (1993) J Biol Chem , vol.268 , pp. 18399-18402
- Sacchettini, J.C.¹ Gordon, J.I.²

26
- 0024356436
- Crystal structure of rat intestinal fatty-acid-binding protein, refinement and analysis of the Eschericia coli-derived protein with bound palmitate
- (1989) J Mol Biol , vol.208 , pp. 327-339
- Sacchettini, J.C.¹ Gordon, J.I.² Banaszak, L.J.³

27
- 0028092978
- A possible route for the release of fatty acid from fatty acid-binding protein
- (1994) Biochem J , vol.301 , pp. 459-463
- Zanotti, G.¹ Feltre, L.² Spadon, P.³

28
- 0028912595
- A sampling problem in molecular dynamics simulations of macromolecules
- (1995) Proc Natl Acad Sci USA , vol.92 , pp. 3288-3292
- Clarage, J.B.¹ Romo, T.² Andrews, B.K.³ Pettitt, B.M.⁴ Phillips G.N., Jr.⁵

29
- 0000547870
- Protein hydration viewed by high-resolution NMR spectroscopy: Implications for magnetic resonance image contrast
- (1995) Acc Chem Res , vol.28 , pp. 171-177
- Otting, G.¹ Liepinsh, E.²

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