-
1
-
-
0035367173
-
Helical membrane proteins: Diversity of functions in the context of simple architecture
-
Ubarretxena-Belandia I, Engelman DM. Helical membrane proteins: diversity of functions in the context of simple architecture. Curr Opin Struct Biol 2001; 11:370-6.
-
(2001)
Curr Opin Struct Biol
, vol.11
, pp. 370-376
-
-
Ubarretxena-Belandia, I.1
Engelman, D.M.2
-
2
-
-
36448995359
-
High-resolution crystal structure of an engineered human beta2-adrenergic G protein-coupled receptor
-
Cherezov V, Rosenbaum DM, Hanson MA, Rasmussen SG, Thian FS, Kobilka TS, et al. High-resolution crystal structure of an engineered human beta2-adrenergic G protein-coupled receptor. Science 2007; 318:1258-65.
-
(2007)
Science
, vol.318
, pp. 1258-1265
-
-
Cherezov, V.1
Rosenbaum, D.M.2
Hanson, M.A.3
Rasmussen, S.G.4
Thian, F.S.5
Kobilka, T.S.6
-
3
-
-
0034644539
-
Cell signaling by receptor tyrosine kinases
-
Schlessinger J. Cell signaling by receptor tyrosine kinases. Cell 2000; 281:211-25.
-
(2000)
Cell
, vol.281
, pp. 211-225
-
-
Schlessinger, J.1
-
4
-
-
0035979763
-
Activation of preformed EGF receptor dimers by ligand-induced rotation of the transmembrane domain
-
Moriki T, Maruyama H, Maruyama IN. Activation of preformed EGF receptor dimers by ligand-induced rotation of the transmembrane domain. J Mol Biol 2001; 311:1011-26.
-
(2001)
J Mol Biol
, vol.311
, pp. 1011-1026
-
-
Moriki, T.1
Maruyama, H.2
Maruyama, I.N.3
-
5
-
-
18744378545
-
A putative molecular-activation switch in the transmembrane domain of ErbB2
-
Fleishman SJ, Schlessinger J, Ben-Tal N. A putative molecular-activation switch in the transmembrane domain of ErbB2. Proc Natl Acad Sci USA 2002; 99:15937-40.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 15937-15940
-
-
Fleishman, S.J.1
Schlessinger, J.2
Ben-Tal, N.3
-
6
-
-
0037085373
-
The single transmembrane domains of ErbB receptors self-associate in cell membranes
-
Mendrola JM, Berger MB, King MC, Lemmon MA. The single transmembrane domains of ErbB receptors self-associate in cell membranes. J Biol Chem 2002; 277:4704-12.
-
(2002)
J Biol Chem
, vol.277
, pp. 4704-4712
-
-
Mendrola, J.M.1
Berger, M.B.2
King, M.C.3
Lemmon, M.A.4
-
7
-
-
33646889068
-
Role of receptor tyrosine kinase transmembrane domains in cell signaling and human pathologies
-
Li E, Hristova K. Role of receptor tyrosine kinase transmembrane domains in cell signaling and human pathologies. Biochemistry 2006; 45:6241-51.
-
(2006)
Biochemistry
, vol.45
, pp. 6241-6251
-
-
Li, E.1
Hristova, K.2
-
8
-
-
0035066332
-
Alzheimer's disease: Genes, proteins and therapy
-
Selkoe DJ. Alzheimer's disease: genes, proteins and therapy. Physiol Rev 2001; 81:741-66.
-
(2001)
Physiol Rev
, vol.81
, pp. 741-766
-
-
Selkoe, D.J.1
-
9
-
-
3042724865
-
Transmembrane peptides as inhibitors of ErbB receptor signaling
-
Bennasroune A, Fickova M, Gardin A, Dirrig-Grosch S, Aunis D, Cremel G, Hubert P. Transmembrane peptides as inhibitors of ErbB receptor signaling. Mol Biol Cell 2004; 15:3464-74.
-
(2004)
Mol Biol Cell
, vol.15
, pp. 3464-3474
-
-
Bennasroune, A.1
Fickova, M.2
Gardin, A.3
Dirrig-Grosch, S.4
Aunis, D.5
Cremel, G.6
Hubert, P.7
-
10
-
-
34247476788
-
Peptides as transmembrane segments: Decrypting the determinants for helix-helix interactions in membrane proteins
-
Rath A, Johnson RM, Deber CM. Peptides as transmembrane segments: decrypting the determinants for helix-helix interactions in membrane proteins. Biopolymers 2007; 88:217-32.
-
(2007)
Biopolymers
, vol.88
, pp. 217-232
-
-
Rath, A.1
Johnson, R.M.2
Deber, C.M.3
-
11
-
-
49749131164
-
Computationally designed peptide inhibitors of protein-protein interactions in membranes
-
Caputo GA, Litvinov RI, Li W, Bennett JS, Degrado WF, Yin H. Computationally designed peptide inhibitors of protein-protein interactions in membranes. Biochemistry 2008; 47:8600-6.
-
(2008)
Biochemistry
, vol.47
, pp. 8600-8606
-
-
Caputo, G.A.1
Litvinov, R.I.2
Li, W.3
Bennett, J.S.4
Degrado, W.F.5
Yin, H.6
-
12
-
-
0025249842
-
Membrane protein folding and oligomerization: The two-stage model
-
Popot JL, Engelman DM. Membrane protein folding and oligomerization: the two-stage model. Biochemistry 1990; 29:4031-7.
-
(1990)
Biochemistry
, vol.29
, pp. 4031-4037
-
-
Popot, J.L.1
Engelman, D.M.2
-
13
-
-
0036958223
-
Attraction within the membrane. Forces behind transmembrane protein folding and supramolecular complex assembly
-
Helms V. Attraction within the membrane. Forces behind transmembrane protein folding and supramolecular complex assembly. EMBO Rep 2002; 3:1133-8.
-
(2002)
EMBO Rep
, vol.3
, pp. 1133-1138
-
-
Helms, V.1
-
14
-
-
7544246277
-
Rendezvous in a membrane: Close packing, hydrogen bonding, and the formation of transmembrane helix oligomers
-
Schneider D. Rendezvous in a membrane: close packing, hydrogen bonding, and the formation of transmembrane helix oligomers. FEBS Lett 2004; 577:5-8.
-
(2004)
FEBS Lett
, vol.577
, pp. 5-8
-
-
Schneider, D.1
-
15
-
-
0022399766
-
Simultaneous modeling of phase and calorimetric behavior in an amphiphilic peptide/phospholipid model membrane
-
Morrow MR, Huschilt JC, Davis JH. Simultaneous modeling of phase and calorimetric behavior in an amphiphilic peptide/phospholipid model membrane. Biochemistry 1985; 24:5396-406.
-
(1985)
Biochemistry
, vol.24
, pp. 5396-5406
-
-
Morrow, M.R.1
Huschilt, J.C.2
Davis, J.H.3
-
16
-
-
7044241302
-
How lipids affect the activities of integral membrane proteins
-
Lee AG. How lipids affect the activities of integral membrane proteins. Biochim Biophys Acta 2004; 1666:62-87.
-
(2004)
Biochim Biophys Acta
, vol.1666
, pp. 62-87
-
-
Lee, A.G.1
-
17
-
-
33846963172
-
How protein transmembrane segments sense the lipid environment
-
Nyholm TK, Ozdirekcan S, Killian JA. How protein transmembrane segments sense the lipid environment. Biochemistry 2007; 46:1457-65.
-
(2007)
Biochemistry
, vol.46
, pp. 1457-1465
-
-
Nyholm, T.K.1
Ozdirekcan, S.2
Killian, J.A.3
-
18
-
-
28244458040
-
Self-association of transmembrane alpha-helices in model membranes importance of helix orientation and role of hydrophobic mismatch
-
Sparr E, Ash WL, Nazarov PV, Rijkers DT, Hemminga MA, Tieleman DP, Killian JA. Self-association of transmembrane alpha-helices in model membranes: importance of helix orientation and role of hydrophobic mismatch. J Biol Chem 2005; 280:39324-31.
-
(2005)
J Biol Chem
, vol.280
, pp. 39324-39331
-
-
Sparr, E.1
Ash, W.L.2
Nazarov, P.V.3
Rijkers, D.T.4
Hemminga, M.A.5
Tieleman, D.P.6
Killian, J.A.7
-
19
-
-
23244449276
-
Transbilayer peptide sorting between raft and nonraft bilayers: Comparisons of detergent extraction and confocal microscopy
-
Vidal A, McIntosh TJ. Transbilayer peptide sorting between raft and nonraft bilayers: comparisons of detergent extraction and confocal microscopy. Biophys J 2005; 89:1102-8.
-
(2005)
Biophys J
, vol.89
, pp. 1102-1108
-
-
Vidal, A.1
McIntosh, T.J.2
-
20
-
-
50349098382
-
Molecular simulations of lipid-mediated protein-protein interactions
-
de Meyer FJ, Venturoli M, Smit B. Molecular simulations of lipid-mediated protein-protein interactions. Biophys J 2008; 95:1851-65.
-
(2008)
Biophys J
, vol.95
, pp. 1851-1865
-
-
De Meyer, F.J.1
Venturoli, M.2
Smit, B.3
-
21
-
-
4143085058
-
Folding of helical membrane proteins: The role of polar, GxxxG-like and proline motifs
-
Senes A, Engel DE, DeGrado WF. Folding of helical membrane proteins: the role of polar, GxxxG-like and proline motifs. Curr Opin Struct Biol 2004; 14:465-79.
-
(2004)
Curr Opin Struct Biol
, vol.14
, pp. 465-479
-
-
Senes, A.1
Engel, D.E.2
DeGrado, W.F.3
-
22
-
-
0042931286
-
Sequence motifs, polar interactions and conformational changes in helical membrane proteins
-
Curran AR, Engelman DM. Sequence motifs, polar interactions and conformational changes in helical membrane proteins. Curr Opin Struct Biol 2003; 13:412-7.
-
(2003)
Curr Opin Struct Biol
, vol.13
, pp. 412-417
-
-
Curran, A.R.1
Engelman, D.M.2
-
23
-
-
0032080907
-
Interaction of transmembrane helices by a knobs-into-holes packing characteristic of soluble coiled coils
-
Langosch D, Heringa J. Interaction of transmembrane helices by a knobs-into-holes packing characteristic of soluble coiled coils. Proteins 1998; 31:150-9.
-
(1998)
Proteins
, vol.31
, pp. 150-159
-
-
Langosch, D.1
Heringa, J.2
-
24
-
-
0029867179
-
Principles of helix-helix packing in proteins: The helical lattice superposition model
-
Walther D, Eisenhaber F, Argos P. Principles of helix-helix packing in proteins: the helical lattice superposition model. J Mol Biol 1996; 255:536-53.
-
(1996)
J Mol Biol
, vol.255
, pp. 536-553
-
-
Walther, D.1
Eisenhaber, F.2
Argos, P.3
-
25
-
-
0007949690
-
Interhelical hydrogen bonding drives strong interactions in membrane proteins
-
Zhou FX, Cocco MJ, Russ WP, Brunger AT, Engelman DM. Interhelical hydrogen bonding drives strong interactions in membrane proteins. Nat Struct Biol 2000; 7:154-60.
-
(2000)
Nat Struct Biol
, vol.7
, pp. 154-160
-
-
Zhou, F.X.1
Cocco, M.J.2
Russ, W.P.3
Brunger, A.T.4
Engelman, D.M.5
-
27
-
-
0037436390
-
Higher-order interhelical spatial interactions in membrane proteins
-
Adamian L, Jackups R, Binkowski TA, Liang J. Higher-order interhelical spatial interactions in membrane proteins. J Mol Biol 2003; 327:251-72.
-
(2003)
J Mol Biol
, vol.327
, pp. 251-272
-
-
Adamian, L.1
Jackups, R.2
Binkowski, T.A.3
Liang, J.4
-
28
-
-
0035969998
-
Polar side chains drive the association of model transmembrane peptides
-
Gratkowski H, Lear JD, DeGrado WF. Polar side chains drive the association of model transmembrane peptides. Proc Natl Acad Sci USA 2001; 98:880-5.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 880-885
-
-
Gratkowski, H.1
Lear, J.D.2
DeGrado, W.F.3
-
30
-
-
0030932407
-
A transmembrane helix dimer: Structure and implications
-
MacKenzie KR, Prestegard JH, Engelman DM. A transmembrane helix dimer: structure and implications. Science 1997; 276:131-3.
-
(1997)
Science
, vol.276
, pp. 131-133
-
-
MacKenzie, K.R.1
Prestegard, J.H.2
Engelman, D.M.3
-
31
-
-
0035979146
-
The Cα-H...O hydrogen bond: A determinant of stability and specificity in transmembrane helix interactions
-
Senes A, Ubarretxena-Belandia I, Engelman DM. The Cα-H...O hydrogen bond: a determinant of stability and specificity in transmembrane helix interactions. Proc Natl Acad Sci USA 2001; 98:9056-61.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 9056-9061
-
-
Senes, A.1
Ubarretxena-Belandia, I.2
Engelman, D.M.3
-
32
-
-
0036301006
-
Motifs of serine and threonine can drive association of transmembrane helices
-
Dawson JP, Weinger JS, Engelman DM. Motifs of serine and threonine can drive association of transmembrane helices. J Mol Biol 2002; 316:799-805.
-
(2002)
J Mol Biol
, vol.316
, pp. 799-805
-
-
Dawson, J.P.1
Weinger, J.S.2
Engelman, D.M.3
-
33
-
-
5144227144
-
Motifs of two small residues can assist but are not sufficient to mediate transmembrane helix interactions
-
Schneider D, Engelman DM. Motifs of two small residues can assist but are not sufficient to mediate transmembrane helix interactions. J Mol Biol 2004; 343:799-804.
-
(2004)
J Mol Biol
, vol.343
, pp. 799-804
-
-
Schneider, D.1
Engelman, D.M.2
-
34
-
-
2342449189
-
Experimental measurement of the strength of a Calpha-H...O bond in a lipid bilayer
-
Arbely E, Arkin IT. Experimental measurement of the strength of a Calpha-H...O bond in a lipid bilayer. J Am Chem Soc 2004; 126:5362-3.
-
(2004)
J Am Chem Soc
, vol.126
, pp. 5362-5363
-
-
Arbely, E.1
Arkin, I.T.2
-
35
-
-
13444279948
-
The contribution of Calpha-H...O hydrogen bonds to membrane protein stability depends on the position of the amide
-
Mottamal M, Lazaridis T. The contribution of Calpha-H...O hydrogen bonds to membrane protein stability depends on the position of the amide. Biochemistry 2005; 44:1607-13.
-
(2005)
Biochemistry
, vol.44
, pp. 1607-1613
-
-
Mottamal, M.1
Lazaridis, T.2
-
36
-
-
0032406838
-
Statistical analysis of predicted transmembrane alpha-helices
-
Arkin IT, Brunger AT. Statistical analysis of predicted transmembrane alpha-helices. Biochim Biophys Acta 1998; 1429:113-28.
-
(1998)
Biochim Biophys Acta
, vol.1429
, pp. 113-128
-
-
Arkin, I.T.1
Brunger, A.T.2
-
37
-
-
0029881315
-
Strong hydrogen bonding interactions involving a buried glutamic acid in the transmembrane sequence of the neu/erbB-2 receptor
-
Smith SO, Smith CS, Bormann BJ. Strong hydrogen bonding interactions involving a buried glutamic acid in the transmembrane sequence of the neu/erbB-2 receptor. Nat Struct Biol 1996; 3:252-8.
-
(1996)
Nat Struct Biol
, vol.3
, pp. 252-258
-
-
Smith, S.O.1
Smith, C.S.2
Bormann, B.J.3
-
38
-
-
57649221018
-
Spatial structure and pH-dependent conformational diversity of dimeric transmembrane domain of the receptor tyrosine kinase EphA1
-
Bocharov EV, Mayzel ML, Volynsky PE, Goncharuk MV, Ermolyuk YS, Schulga AA, et al. Spatial structure and pH-dependent conformational diversity of dimeric transmembrane domain of the receptor tyrosine kinase EphA1. J Biol Chem 2008; 283:29385-95.
-
(2008)
J Biol Chem
, vol.283
, pp. 29385-29395
-
-
Bocharov, E.V.1
Mayzel, M.L.2
Volynsky, P.E.3
Goncharuk, M.V.4
Ermolyuk, Y.S.5
Schulga, A.A.6
-
39
-
-
46049088691
-
Protein-protein interactions in the membrane: Sequence, structural and biological motifs
-
Moore DT, Berger BW, DeGrado WF. Protein-protein interactions in the membrane: sequence, structural and biological motifs. Structure 2008; 16:991-1001.
-
(2008)
Structure
, vol.16
, pp. 991-1001
-
-
Moore, D.T.1
Berger, B.W.2
DeGrado, W.F.3
-
40
-
-
65649127175
-
3 transmembrane complex explains integrin transmembrane signalling
-
3 transmembrane complex explains integrin transmembrane signalling. EMBO J 2009; 28:1351-61.
-
(2009)
EMBO J
, vol.28
, pp. 1351-1361
-
-
Lau, T.L.1
Kim, C.2
Ginsberg, M.H.3
Ulmer, T.S.4
-
41
-
-
0030983047
-
Architecture of helix bundle membrane proteins: An analysis of cytochrome c oxidase from bovine mitochondria
-
Wallin E, Tsukihara T, Yoshikawa S, von Heijne G, Elofsson A. Architecture of helix bundle membrane proteins: an analysis of cytochrome c oxidase from bovine mitochondria. Protein Sci 1997; 6:808-15.
-
(1997)
Protein Sci
, vol.6
, pp. 808-815
-
-
Wallin, E.1
Tsukihara, T.2
Yoshikawa, S.3
Von Heijne, G.4
Elofsson, A.5
-
42
-
-
17844379225
-
Empirical lipid propensities of amino acid residues in multispan alpha helical membrane proteins
-
Adamian L, Nanda V, DeGrado WF, Liang J. Empirical lipid propensities of amino acid residues in multispan alpha helical membrane proteins. Proteins 2005; 59:496-509.
-
(2005)
Proteins
, vol.59
, pp. 496-509
-
-
Adamian, L.1
Nanda, V.2
DeGrado, W.F.3
Liang, J.4
-
43
-
-
59949089096
-
The strong dimerization of the transmembrane domain of the fibroblast growth factor receptor (FGFR) is modulated by C-terminal juxtamembrane residues
-
Peng WC, Lin X, Torres J. The strong dimerization of the transmembrane domain of the fibroblast growth factor receptor (FGFR) is modulated by C-terminal juxtamembrane residues. Protein Sci 2009; 18:450-9.
-
(2009)
Protein Sci
, vol.18
, pp. 450-459
-
-
Peng, W.C.1
Lin, X.2
Torres, J.3
-
44
-
-
34547857813
-
Aromatic and cation-pi interactions enhance helix-helix association in a membrane environment
-
Johnson RM, Hecht K, Deber CM. Aromatic and cation-pi interactions enhance helix-helix association in a membrane environment. Biochemistry 2007; 46:9208-14.
-
(2007)
Biochemistry
, vol.46
, pp. 9208-9214
-
-
Johnson, R.M.1
Hecht, K.2
Deber, C.M.3
-
45
-
-
35548974250
-
Phenylalanine promotes interaction of transmembrane domains via GxxxG motifs
-
Unterreitmeier S, Fuchs A, Schäffler T, Heym RG, Frishman D, Langosch D. Phenylalanine promotes interaction of transmembrane domains via GxxxG motifs. J Mol Biol 2007; 374:705-18.
-
(2007)
J Mol Biol
, vol.374
, pp. 705-718
-
-
Unterreitmeier, S.1
Fuchs, A.2
Schäffler, T.3
Heym, R.G.4
Frishman, D.5
Langosch, D.6
-
46
-
-
34547131849
-
Specificity in transmembrane helix-helix interactions mediated by aromatic residues
-
Sal-Man N, Gerber D, Bloch I, Shai Y. Specificity in transmembrane helix-helix interactions mediated by aromatic residues. J Biol Chem 2007; 282:19753-61.
-
(2007)
J Biol Chem
, vol.282
, pp. 19753-19761
-
-
Sal-Man, N.1
Gerber, D.2
Bloch, I.3
Shai, Y.4
-
48
-
-
0036761434
-
In vitro selection of self-interacting transmembrane segments - Membrane proteins approached from a different perspective
-
Langosch D, Lindner E, Gurezka R. In vitro selection of self-interacting transmembrane segments - membrane proteins approached from a different perspective. IUBMB Life 2002; 54:109-13.
-
(2002)
IUBMB Life
, vol.54
, pp. 109-113
-
-
Langosch, D.1
Lindner, E.2
Gurezka, R.3
-
49
-
-
26444611461
-
Transmembrane glycine zippers: Physiological and pathological roles in membrane proteins
-
Kim S, Jeon TJ, Oberai A, Yang D, Schmidt JJ, Bowie JU. Transmembrane glycine zippers: physiological and pathological roles in membrane proteins. Proc Natl Acad Sci USA 2005; 102:14279-83.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 14279-14283
-
-
Kim, S.1
Jeon, T.J.2
Oberai, A.3
Yang, D.4
Schmidt, J.J.5
Bowie, J.U.6
-
50
-
-
0030271515
-
Coiled coils: New structures and new functions
-
Lupas A. Coiled coils: New structures and new functions. Trends Biochem Sci 1996; 21:375-82.
-
(1996)
Trends Biochem Sci
, vol.21
, pp. 375-382
-
-
Lupas, A.1
-
51
-
-
13844284976
-
Association of a model transmembrane peptide containing gly in a heptad sequence motif
-
Lear JD, Stouffer AL, Gratkowski H, Nanda V, Degrado WF. Association of a model transmembrane peptide containing gly in a heptad sequence motif. Biophys J 2004; 87:3421-9.
-
(2004)
Biophys J
, vol.87
, pp. 3421-3429
-
-
Lear, J.D.1
Stouffer, A.L.2
Gratkowski, H.3
Nanda, V.4
Degrado, W.F.5
-
52
-
-
0942276402
-
The interface between self-assembling erythropoietin receptor transmembrane segments corresponds to a membrane-spanning leucine zipper
-
Ruan W, Becker V, Klingmüller U, Langosch D. The interface between self-assembling erythropoietin receptor transmembrane segments corresponds to a membrane-spanning leucine zipper. J Biol Chem 2004; 279:3273-9.
-
(2004)
J Biol Chem
, vol.279
, pp. 3273-3279
-
-
Ruan, W.1
Becker, V.2
Klingmüller, U.3
Langosch, D.4
-
53
-
-
33744807250
-
Characterization of a membrane protein folding motif, the Ser zipper using designed peptides
-
North B, Cristian L, Fu Stowell X, Lear JD, Saven JG, Degrado WF. Characterization of a membrane protein folding motif, the Ser zipper, using designed peptides. J Mol Biol 2006; 359:930-9.
-
(2006)
J Mol Biol
, vol.359
, pp. 930-939
-
-
North, B.1
Cristian, L.2
Fu Stowell, X.3
Lear, J.D.4
Saven, J.G.5
Degrado, W.F.6
-
54
-
-
67650069254
-
Interaction and conformational dynamics of membrane-spanning protein helices
-
Langosch D, Arkin IT. Interaction and conformational dynamics of membrane-spanning protein helices. Protein Sci 2009; 18:1343-58.
-
(2009)
Protein Sci
, vol.18
, pp. 1343-1358
-
-
Langosch, D.1
Arkin, I.T.2
-
55
-
-
33646902110
-
Folding and stability of alpha-helical integral membrane proteins
-
Mackenzie KR. Folding and stability of alpha-helical integral membrane proteins. Chem Rev 2006; 106:1931-77.
-
(2006)
Chem Rev
, vol.106
, pp. 1931-1977
-
-
Mackenzie, K.R.1
-
56
-
-
33947427982
-
The position of the Gly-xxx-Gly motif in transmembrane segments modulates dimer affinity
-
Johnson RM, Rath A, Deber CM. The position of the Gly-xxx-Gly motif in transmembrane segments modulates dimer affinity. Biochem Cell Biol 2006; 84:1006-12.
-
(2006)
Biochem Cell Biol
, vol.84
, pp. 1006-1012
-
-
Johnson, R.M.1
Rath, A.2
Deber, C.M.3
-
57
-
-
68949142901
-
Transmembrane helix-helix association affinity can be modulated by flanking and noninterfacial residues
-
Zhang J, Lazaridis T. Transmembrane helix-helix association affinity can be modulated by flanking and noninterfacial residues. Biophys J 2009; 96:4418-27.
-
(2009)
Biophys J
, vol.96
, pp. 4418-4427
-
-
Zhang, J.1
Lazaridis, T.2
-
58
-
-
4444310733
-
Peptides and proteins in membranes: What can we learn via computer simulations?
-
Efremov RG, Nolde DE, Konshina AG, Syrtcev NP, Arseniev AS. Peptides and proteins in membranes: what can we learn via computer simulations? Curr Med Chem 2004; 11:2421-42.
-
(2004)
Curr Med Chem
, vol.11
, pp. 2421-2442
-
-
Efremov, R.G.1
Nolde, D.E.2
Konshina, A.G.3
Syrtcev, N.P.4
Arseniev, A.S.5
-
59
-
-
1942456697
-
Recent advances in the development and application of implicit solvent models in biomolecule simulations
-
Feig M, Brooks CL, 3rd. Recent advances in the development and application of implicit solvent models in biomolecule simulations. Curr Opin Struct Biol 2004; 14:217-24.
-
(2004)
Curr Opin Struct Biol
, vol.14
, pp. 217-224
-
-
Feig, M.1
Brooks III, C.L.2
-
61
-
-
39449131104
-
Coarse-grained simulation: A high-throughput computational approach to membrane proteins
-
Sansom MS, Scott KA, Bond PJ. Coarse-grained simulation: a high-throughput computational approach to membrane proteins. Biochem Soc Trans 2008; 36:27-32.
-
(2008)
Biochem Soc Trans
, vol.36
, pp. 27-32
-
-
Sansom, M.S.1
Scott, K.A.2
Bond, P.J.3
-
62
-
-
33749578426
-
Quaternary structure predictions of transmembrane proteins starting from the monomer: A docking-based approach
-
Casciari D, Seeber M, Fanelli F. Quaternary structure predictions of transmembrane proteins starting from the monomer: a docking-based approach. BMC Bioinformatics 2006; 7:340.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 340
-
-
Casciari, D.1
Seeber, M.2
Fanelli, F.3
-
63
-
-
33745173082
-
Association of transmembrane helices: What determines assembling of a dimer?
-
Efremov RG, Vereshaga YA, Volynsky PE, Nolde DE, Arseniev AS. Association of transmembrane helices: what determines assembling of a dimer? J Comput Aided Mol Des 2006; 20:27-45.
-
(2006)
J Comput Aided Mol Des
, vol.20
, pp. 27-45
-
-
Efremov, R.G.1
Vereshaga, Y.A.2
Volynsky, P.E.3
Nolde, D.E.4
Arseniev, A.S.5
-
64
-
-
33745182553
-
Helix interactions in membranes lessons from unrestrained Monte Carlo simulations
-
Vereshaga YA, Volynsky PE, Nolde DE, Arseniev AS, Efremov RG. Helix interactions in membranes: lessons from unrestrained Monte Carlo simulations. J Chem Theory Comput 2005; 1:1252-64.
-
(2005)
J Chem Theory Comput
, vol.1
, pp. 1252-1264
-
-
Vereshaga, Y.A.1
Volynsky, P.E.2
Nolde, D.E.3
Arseniev, A.S.4
Efremov, R.G.5
-
65
-
-
77949509024
-
Molecular dynamics simulations of the dimerization of transmembrane alpha-helices
-
Psachoulia E, Marshall DP, Sansom MS. Molecular dynamics simulations of the dimerization of transmembrane alpha-helices. Acc Chem Res 2010; 43:388-96.
-
Acc Chem Res
, vol.2010
, Issue.43
, pp. 388-396
-
-
Psachoulia, E.1
Marshall, D.P.2
Sansom, M.S.3
-
66
-
-
0027050182
-
Sequence specificity in the dimerization of transmembrane alpha-helices
-
Lemmon MA, Flangan JM, Treutlein HR, Zhang J, Engelman DM. Sequence specificity in the dimerization of transmembrane alpha-helices. Biochemistry 1992; 31:12719-25.
-
(1992)
Biochemistry
, vol.31
, pp. 12719-12725
-
-
Lemmon, M.A.1
Flangan, J.M.2
Treutlein, H.R.3
Zhang, J.4
Engelman, D.M.5
-
67
-
-
0036298185
-
Transmembrane domain mediated self-assembly of major coat protein subunits from Ff bacteriophage
-
Melnyk RA, Partridge AW, Deber CM. Transmembrane domain mediated self-assembly of major coat protein subunits from Ff bacteriophage. J Mol Biol 2002; 31:63-72.
-
(2002)
J Mol Biol
, vol.31
, pp. 63-72
-
-
Melnyk, R.A.1
Partridge, A.W.2
Deber, C.M.3
-
68
-
-
0345802999
-
Sequence-specific dimerization of the transmembrane domain of the "BH3-only" protein BNIP3 in membranes and detergent
-
Sulistijo ES, Jaszewski TM, MacKenzie KR. Sequence-specific dimerization of the transmembrane domain of the "BH3-only" protein BNIP3 in membranes and detergent. J Biol Chem 2003; 278:51950-6.
-
(2003)
J Biol Chem
, vol.278
, pp. 51950-51956
-
-
Sulistijo, E.S.1
Jaszewski, T.M.2
MacKenzie, K.R.3
-
69
-
-
0035836645
-
Ligand-independent oligomerization of cell-surface erythropoietin receptor is mediated by the transmembrane domain
-
Constantinescu SN, Keren T, Socolovsky M, Nam H, Henis YI, Lodish HF. Ligand-independent oligomerization of cell-surface erythropoietin receptor is mediated by the transmembrane domain. Proc Natl Acad Sci USA 2001; 98:4379-84.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 4379-4384
-
-
Constantinescu, S.N.1
Keren, T.2
Socolovsky, M.3
Nam, H.4
Henis, Y.I.5
Lodish, H.F.6
-
70
-
-
0035823495
-
Homodimerization of amyloid precursor protein and its implication in the amyloidogenic pathway of Alzheimer's disease
-
Scheuermann S, Hambsch B, Hesse L, Stumm J, Schmidt C, Beher D, et al. Homodimerization of amyloid precursor protein and its implication in the amyloidogenic pathway of Alzheimer's disease. J Biol Chem 2001; 276:33923-9.
-
(2001)
J Biol Chem
, vol.276
, pp. 33923-33929
-
-
Scheuermann, S.1
Hambsch, B.2
Hesse, L.3
Stumm, J.4
Schmidt, C.5
Beher, D.6
-
71
-
-
0036708468
-
Cooperativity and specificity of association of a designed transmembrane peptide
-
Gratkowski H, Dai Q, Wand AJ, DeGrado WF, Lear JD. Cooperativity and specificity of association of a designed transmembrane peptide. Biophys J 2002; 83:1613-9.
-
(2002)
Biophys J
, vol.83
, pp. 1613-1619
-
-
Gratkowski, H.1
Dai, Q.2
Wand, A.J.3
DeGrado, W.F.4
Lear, J.D.5
-
72
-
-
0242322528
-
An implicit membrane generalized born theory for the study of structure, stability and interactions of membrane proteins
-
Im W, Feig M, Brooks CL, III. An implicit membrane generalized born theory for the study of structure, stability and interactions of membrane proteins. Biophys J 2003; 85:2900-18.
-
(2003)
Biophys J
, vol.85
, pp. 2900-2918
-
-
Im, W.1
Feig, M.2
Brooks III, C.L.3
-
73
-
-
0034703270
-
Modulation of glycophorin a transmembrane helix interactions by lipid bilayers: Molecular dynamics calculations
-
Petrache HI, Grossfield A, MacKenzie KR, Engelman DM, Woolf TB. Modulation of glycophorin A transmembrane helix interactions by lipid bilayers: molecular dynamics calculations. J Mol Biol 2000; 302:727-46.
-
(2000)
J Mol Biol
, vol.302
, pp. 727-746
-
-
Petrache, H.I.1
Grossfield, A.2
MacKenzie, K.R.3
Engelman, D.M.4
Woolf, T.B.5
-
74
-
-
69249219030
-
Utility of surface-supported bilayers in studies of transmembrane helix dimerization
-
Li E, Merzlyakov M, Lin J, Searson P, Hristova K. Utility of surface-supported bilayers in studies of transmembrane helix dimerization. J Struct Biol 2009; 168:53-60.
-
(2009)
J Struct Biol
, vol.168
, pp. 53-60
-
-
Li, E.1
Merzlyakov, M.2
Lin, J.3
Searson, P.4
Hristova, K.5
-
75
-
-
33847270649
-
From interactions of single transmembrane helices to folding of alpha-helical membrane proteins: Analyzing transmembrane helix-helix interactions in bacteria
-
Schneider D, Finger C, Prodöhl A, Volkmer T. From interactions of single transmembrane helices to folding of alpha-helical membrane proteins: analyzing transmembrane helix-helix interactions in bacteria. Curr Protein Pept Sci 2007; 8:45-61.
-
(2007)
Curr Protein Pept Sci
, vol.8
, pp. 45-61
-
-
Schneider, D.1
Finger, C.2
Prodöhl, A.3
Volkmer, T.4
-
76
-
-
0029847652
-
Improved prediction for the structure of the dimeric transmembrane domain of glycophorin a obtained through global searching
-
Adams PD, Engelman DM, Brünger AT. Improved prediction for the structure of the dimeric transmembrane domain of glycophorin A obtained through global searching. Proteins 1996; 26:257-61.
-
(1996)
Proteins
, vol.26
, pp. 257-261
-
-
Adams, P.D.1
Engelman, D.M.2
Brünger, A.T.3
-
77
-
-
0036224950
-
Implications of threonine hydrogen bonding in the glycophorin a transmembrane helix dimer
-
Smith SO, Eilers M, Song D, Crocker E, Ying W, Groesbeek M, et al. Implications of threonine hydrogen bonding in the glycophorin A transmembrane helix dimer. Biophys J 2002; 82:2476-86.
-
(2002)
Biophys J
, vol.82
, pp. 2476-2486
-
-
Smith, S.O.1
Eilers, M.2
Song, D.3
Crocker, E.4
Ying, W.5
Groesbeek, M.6
-
78
-
-
0035811042
-
Structure of the transmembrane dimer interface of glycophorin a in membrane bilayers
-
Smith SO, Song D, Shekar S, Groesbeek M, Ziliox M, Aimoto S. Structure of the transmembrane dimer interface of glycophorin A in membrane bilayers. Biochemistry 2001; 40:6553-8.
-
(2001)
Biochemistry
, vol.40
, pp. 6553-6558
-
-
Smith, S.O.1
Song, D.2
Shekar, S.3
Groesbeek, M.4
Ziliox, M.5
Aimoto, S.6
-
79
-
-
33746869325
-
The transmembrane domain of the oncogenic mutant ErbB-2 receptor a structure obtained from site-specific infrared dichroism and molecular dynamics
-
Beevers AJ, Kukol A. The transmembrane domain of the oncogenic mutant ErbB-2 receptor: a structure obtained from site-specific infrared dichroism and molecular dynamics. J Mol Biol 2006; 361:945-53.
-
(2006)
J Mol Biol
, vol.361
, pp. 945-953
-
-
Beevers, A.J.1
Kukol, A.2
-
80
-
-
34548757937
-
Specificity of helix packing in transmembrane dimer of the cell death factor BNIP3: A molecular modeling study
-
Vereshaga YA, Volynsky PE, Pustovalova JE, Nolde DE, Arseniev AS, Efremov RG. Specificity of helix packing in transmembrane dimer of the cell death factor BNIP3: a molecular modeling study. Proteins 2007; 69:309-25.
-
(2007)
Proteins
, vol.69
, pp. 309-325
-
-
Vereshaga, Y.A.1
Volynsky, P.E.2
Pustovalova, J.E.3
Nolde, D.E.4
Arseniev, A.S.5
Efremov, R.G.6
-
81
-
-
34447523353
-
Unique dimeric structure of BNip3 transmembrane domain suggests membrane permeabilization as a cell death trigger
-
Bocharov EV, Pustovalova YE, Pavlov KV, Volynsky PE, Goncharuk MV, Ermolyuk YS, et al. Unique dimeric structure of BNip3 transmembrane domain suggests membrane permeabilization as a cell death trigger. J Biol Chem 2007; 282:16256-66.
-
(2007)
J Biol Chem
, vol.282
, pp. 16256-16266
-
-
Bocharov, E.V.1
Pustovalova, Y.E.2
Pavlov, K.V.3
Volynsky, P.E.4
Goncharuk, M.V.5
Ermolyuk, Y.S.6
-
82
-
-
77949865294
-
Computer simulations and modeling-assisted ToxR screening in deciphering 3D structures of transmembrane α-helical dimers: Ephrin receptor A1
-
Volynsky PE, Mineeva EA, Goncharuk MV, Ermolyuk YS, Arseniev AS, Efremov RG. Computer simulations and modeling-assisted ToxR screening in deciphering 3D structures of transmembrane α-helical dimers: ephrin receptor A1. Phys Biol 2010; 7:16014.
-
(2010)
Phys Biol
, vol.7
, pp. 16014
-
-
Volynsky, P.E.1
Mineeva, E.A.2
Goncharuk, M.V.3
Ermolyuk, Y.S.4
Arseniev, A.S.5
Efremov, R.G.6
-
86
-
-
4344704702
-
Structure determination of membrane proteins by NMR spectroscopy
-
Opella SJ, Marassi FM. Structure determination of membrane proteins by NMR spectroscopy. Chem Rev 2004; 104:3587-606.
-
(2004)
Chem Rev
, vol.104
, pp. 3587-3606
-
-
Opella, S.J.1
Marassi, F.M.2
-
87
-
-
25144453329
-
Determination of membrane protein structure and dynamics by magic-angle-spinning solid-state NMR spectroscopy
-
Andronesi OC, Becker S, Seidel K, Heise H, Young HS, Baldus M. Determination of membrane protein structure and dynamics by magic-angle-spinning solid-state NMR spectroscopy. J Am Chem Soc 2005; 127:12965-74.
-
(2005)
J Am Chem Soc
, vol.127
, pp. 12965-12974
-
-
Andronesi, O.C.1
Becker, S.2
Seidel, K.3
Heise, H.4
Young, H.S.5
Baldus, M.6
-
88
-
-
60849131737
-
A helix-to-coil transition at the ε-cut site in the transmembrane dimer of the amyloid precursor protein is required for proteolysis
-
Sato T, Tang T, Reubins G, Fei JZ, Taiki F, Kienlen-Campar P, et al. A helix-to-coil transition at the ε-cut site in the transmembrane dimer of the amyloid precursor protein is required for proteolysis. Proc Natl Acad Sci USA 2008; 106:1421-6.
-
(2008)
Proc Natl Acad Sci USA
, vol.106
, pp. 1421-1426
-
-
Sato, T.1
Tang, T.2
Reubins, G.3
Fei, J.Z.4
Taiki, F.5
Kienlen-Campar, P.6
-
89
-
-
0037199467
-
Transmembrane interactions in the activation of the Neu receptor tyrosine kinase
-
Smith SO, Smith C, Shekar S, Peersen O, Ziliox M, Aimoto S. Transmembrane interactions in the activation of the Neu receptor tyrosine kinase. Biochemistry 2002; 41:9321-32.
-
(2002)
Biochemistry
, vol.41
, pp. 9321-9332
-
-
Smith, S.O.1
Smith, C.2
Shekar, S.3
Peersen, O.4
Ziliox, M.5
Aimoto, S.6
-
90
-
-
0030612833
-
Attenuated T2 relaxation by mutual cancellation of dipole-dipole coupling and chemical shift anisotropy indicates an avenue to NMR structures of very large biological macromolecules in solution
-
Pervushin K, Riek R, Wider G, Wüthrich K. Attenuated T2 relaxation by mutual cancellation of dipole-dipole coupling and chemical shift anisotropy indicates an avenue to NMR structures of very large biological macromolecules in solution. Proc Natl Acad Sci USA 1997; 94:12366-71.
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 12366-12371
-
-
Pervushin, K.1
Riek, R.2
Wider, G.3
Wüthrich, K.4
-
91
-
-
70349745154
-
Recent advances in the application of solution NMR spectroscopy to multi-span integral membrane proteins
-
Kim HJ, Howell SC, Van Horn WD, Jeon YH, Sanders CR. Recent advances in the application of solution NMR spectroscopy to multi-span integral membrane proteins. Prog Nucl Magn Reson Spectrosc 2009; 55:335-60.
-
(2009)
Prog Nucl Magn Reson Spectrosc
, vol.55
, pp. 335-360
-
-
Kim, H.J.1
Howell, S.C.2
Van Horn, W.D.3
Jeon, Y.H.4
Sanders, C.R.5
-
92
-
-
53249113785
-
Solution-state NMR spectroscopy of a seven-helix transmembrane protein receptor: Backbone assignment, secondary structure and dynamics
-
Gautier A, Kirkpatrick JP, Nietlispach D. Solution-state NMR spectroscopy of a seven-helix transmembrane protein receptor: backbone assignment, secondary structure and dynamics. Angew Chem Int Ed Engl 2008; 47:7297-300.
-
(2008)
Angew Chem Int Ed Engl
, vol.47
, pp. 7297-7300
-
-
Gautier, A.1
Kirkpatrick, J.P.2
Nietlispach, D.3
-
93
-
-
1242340504
-
An evaluation of detergents for NMR structural studies of membrane proteins
-
Krueger-Koplin RD, Sorgen PL, Krueger-Koplin ST, Rivera-Torres IO, Cahill SM, Hicks DB, et al. An evaluation of detergents for NMR structural studies of membrane proteins. J Biomol NMR 2004; 28:43-57.
-
(2004)
J Biomol NMR
, vol.28
, pp. 43-57
-
-
Krueger-Koplin, R.D.1
Sorgen, P.L.2
Krueger-Koplin, S.T.3
Rivera-Torres, I.O.4
Cahill, S.M.5
Hicks, D.B.6
-
94
-
-
33746217557
-
Solution NMR of membrane proteins: Practice and challenges
-
Sanders CR, Sönnichsen F. Solution NMR of membrane proteins: practice and challenges. Magn Reson Chem 2006; 44:24-40.
-
(2006)
Magn Reson Chem
, vol.44
, pp. 24-40
-
-
Sanders, C.R.1
Sönnichsen, F.2
-
95
-
-
33747687719
-
Comprehensive evaluation of solution nuclear magnetic resonance spectroscopy sample preparation for helical integral membrane proteins
-
Page RC, Moore JD, Nguyen HB, Sharma M, Chase R, Gao FP, et al. Comprehensive evaluation of solution nuclear magnetic resonance spectroscopy sample preparation for helical integral membrane proteins. J Struct Funct Genomics 2006; 7:51-64.
-
(2006)
J Struct Funct Genomics
, vol.7
, pp. 51-64
-
-
Page, R.C.1
Moore, J.D.2
Nguyen, H.B.3
Sharma, M.4
Chase, R.5
Gao, F.P.6
-
96
-
-
38849171893
-
NMR spectroscopic and analytical ultracentrifuge analysis of membrane protein detergent complexes
-
Maslennikov I, Kefala G, Johnson C, Riek R, Choe S, Kwiatkowski W. NMR spectroscopic and analytical ultracentrifuge analysis of membrane protein detergent complexes. BMC Struct Biol 2007; 7:74.
-
(2007)
BMC Struct Biol
, vol.7
, pp. 74
-
-
Maslennikov, I.1
Kefala, G.2
Johnson, C.3
Riek, R.4
Choe, S.5
Kwiatkowski, W.6
-
97
-
-
0038375258
-
Structure and positioning comparison of two variants of penetratin in two different membrane mimicking systems by NMR
-
Lindberg M, Biverståhl H, Gräslund A, Mäler L. Structure and positioning comparison of two variants of penetratin in two different membrane mimicking systems by NMR. Eur J Biochem 2003; 270:3055-63.
-
(2003)
Eur J Biochem
, vol.270
, pp. 3055-3063
-
-
Lindberg, M.1
Biverståhl, H.2
Gräslund, A.3
Mäler, L.4
-
98
-
-
0037139592
-
Micelle-induced curvature in a water-insoluble HIV-1 Env peptide revealed by NMR dipolar coupling measurement in stretched polyacrylamide gel
-
Chou JJ, Kaufman JD, Stahl SJ, Wingfield PT, Bax A. Micelle-induced curvature in a water-insoluble HIV-1 Env peptide revealed by NMR dipolar coupling measurement in stretched polyacrylamide gel. J Am Chem Soc 2002; 124:2450-1.
-
(2002)
J Am Chem Soc
, vol.124
, pp. 2450-2451
-
-
Chou, J.J.1
Kaufman, J.D.2
Stahl, S.J.3
Wingfield, P.T.4
Bax, A.5
-
99
-
-
71649092717
-
Alpha-helical transmembrane peptides: A "divide and conquer" approach to membrane proteins
-
Bordag N, Keller S. Alpha-helical transmembrane peptides: a "divide and conquer" approach to membrane proteins. Chem Phys Lipids 2010; 163:1-26.
-
(2010)
Chem Phys Lipids
, vol.163
, pp. 1-26
-
-
Bordag, N.1
Keller, S.2
-
100
-
-
67049171187
-
Structural basis for dimerization of the BNIP3 transmembrane domain
-
Sulistijo ES, Mackenzie KR. Structural basis for dimerization of the BNIP3 transmembrane domain. Biochemistry 2009; 48:5106-20.
-
(2009)
Biochemistry
, vol.48
, pp. 5106-5120
-
-
Sulistijo, E.S.1
Mackenzie, K.R.2
-
101
-
-
0035909077
-
Retention of native-like oligomerization states in transmembrane segment peptides application to the Escherichia coli aspartate receptor
-
Melnyk RA, Partridge AW, Deber CM. Retention of native-like oligomerization states in transmembrane segment peptides: application to the Escherichia coli aspartate receptor. Biochemistry 2001; 40:11106-13.
-
(2001)
Biochemistry
, vol.40
, pp. 11106-11113
-
-
Melnyk, R.A.1
Partridge, A.W.2
Deber, C.M.3
-
102
-
-
0036385728
-
Oligomerization of a peptide derived from the transmembrane region of the sodium pump gamma subunit effect of the pathological mutation G41R
-
Therien AG, Deber CM. Oligomerization of a peptide derived from the transmembrane region of the sodium pump gamma subunit: effect of the pathological mutation G41R. J Mol Biol 2002; 322:550-83.
-
(2002)
J Mol Biol
, vol.322
, pp. 550-583
-
-
Therien, A.G.1
Deber, C.M.2
-
103
-
-
70349437270
-
The nanodisc: A novel tool for membrane protein studies
-
Borch J, Hamann T. The nanodisc: a novel tool for membrane protein studies. Biol Chem 2009; 390:805-14.
-
(2009)
Biol Chem
, vol.390
, pp. 805-814
-
-
Borch, J.1
Hamann, T.2
-
104
-
-
33847639732
-
Applications of phospholipid bilayer nanodiscs in the study of membranes and membrane proteins
-
Nath A, Atkins WM, Sligar SG. Applications of phospholipid bilayer nanodiscs in the study of membranes and membrane proteins. Biochemistry 2007; 46:2059-69.
-
(2007)
Biochemistry
, vol.46
, pp. 2059-2069
-
-
Nath, A.1
Atkins, W.M.2
Sligar, S.G.3
-
105
-
-
71549142855
-
Reconstitution of membrane proteins in phospholipid bilayer nanodiscs
-
Ritchie TK, Grinkova YV, Bayburt TH, Denisov IG, Zolnerciks JK, Atkins WM, Sligar SG. Reconstitution of membrane proteins in phospholipid bilayer nanodiscs. Methods Enzymol 2009; 464:211-31.
-
(2009)
Methods Enzymol
, vol.464
, pp. 211-231
-
-
Ritchie, T.K.1
Grinkova, Y.V.2
Bayburt, T.H.3
Denisov, I.G.4
Zolnerciks, J.K.5
Atkins, W.M.6
Sligar, S.G.7
-
106
-
-
39549091095
-
Lipid-protein nanoscale bilayers: A versatile medium for NMR investigations of membrane proteins and membrane-active peptides
-
Lyukmanova EN, Shenkarev ZO, Paramonov AS, Sobol AG, Ovchinnikova TV, Chupin VV, et al. Lipid-protein nanoscale bilayers: a versatile medium for NMR investigations of membrane proteins and membrane-active peptides. J Am Chem Soc 2008; 130:2140-1.
-
(2008)
J Am Chem Soc
, vol.130
, pp. 2140-2141
-
-
Lyukmanova, E.N.1
Shenkarev, Z.O.2
Paramonov, A.S.3
Sobol, A.G.4
Ovchinnikova, T.V.5
Chupin, V.V.6
-
107
-
-
0033609011
-
Polarization transfer by cross-correlated relaxation in solution NMR with very large molecules
-
Riek R, Wider G, Pervushin K, Wüthrich K. Polarization transfer by cross-correlated relaxation in solution NMR with very large molecules. Proc Natl Acad Sci USA 1999; 96:4918-23.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 4918-4923
-
-
Riek, R.1
Wider, G.2
Pervushin, K.3
Wüthrich, K.4
-
108
-
-
77952565432
-
Lipid-Protein Nanodiscs as Reference Medium in Detergent Screening for High-Resolution NMR Studies of Integral Membrane Proteins
-
in press
-
Shenkarev ZO, Lyukmanova EN, Paramonov AS, Shingarova LN, Chupin VV, Kirpichnikov MP, et al. Lipid-Protein Nanodiscs as Reference Medium in Detergent Screening for High-Resolution NMR Studies of Integral Membrane Proteins. J Am Chem Soc 2010; in press.
-
(2010)
J Am Chem Soc
-
-
Shenkarev, Z.O.1
Lyukmanova, E.N.2
Paramonov, A.S.3
Shingarova, L.N.4
Chupin, V.V.5
Kirpichnikov, M.P.6
-
109
-
-
70349437270
-
The nanodisc: A novel tool for membrane protein studies
-
Borch J, Hamann T. The nanodisc: a novel tool for membrane protein studies. Biol Chem 200; 390:805-14.
-
Biol Chem 200
, vol.390
, pp. 805-814
-
-
Borch, J.1
Hamann, T.2
-
110
-
-
36849088540
-
Solution NMR of membrane proteins in bilayer mimics: Small is beautiful, but sometimes bigger is better
-
Poget SF, Girvin ME. Solution NMR of membrane proteins in bilayer mimics: small is beautiful, but sometimes bigger is better. Biochim Biophys Acta 2007; 1768:3098-106.
-
(2007)
Biochim Biophys Acta
, vol.1768
, pp. 3098-3106
-
-
Poget, S.F.1
Girvin, M.E.2
-
111
-
-
0031112791
-
Isotropic Solutions of phospholipid micelles a new membrane mimetic for high-resolution NMR studies of polypeptides
-
Vold RR, Prosser RS, Deese AJ. Isotropic Solutions of phospholipid micelles: A new membrane mimetic for high-resolution NMR studies of polypeptides. J Biomol NMR 1997; 9:329-35.
-
(1997)
J Biomol NMR
, vol.9
, pp. 329-335
-
-
Vold, R.R.1
Prosser, R.S.2
Deese, A.J.3
-
112
-
-
54249086668
-
Bilayer in small bicelles revealed by lipid-protein interactions using NMR spectroscopy
-
Lee D, Walter KF, Brückner AK, Hilty C, Becker S, Griesinger C. Bilayer in small bicelles revealed by lipid-protein interactions using NMR spectroscopy. J Am Chem Soc 2008; 130:13822-3.
-
(2008)
J Am Chem Soc
, vol.130
, pp. 13822-13823
-
-
Lee, D.1
Walter, K.F.2
Brückner, A.K.3
Hilty, C.4
Becker, S.5
Griesinger, C.6
-
113
-
-
4344582879
-
Direct observation and characterization of DMPC/DHPC aggregates under conditions relevant for biological solution NMR
-
Van Dam L, Karlsson G, Edwards K. Direct observation and characterization of DMPC/DHPC aggregates under conditions relevant for biological solution NMR. Biochim Biophys Acta 2004; 1664:241-56.
-
(2004)
Biochim Biophys Acta
, vol.1664
, pp. 241-256
-
-
Van Dam, L.1
Karlsson, G.2
Edwards, K.3
-
114
-
-
0034814745
-
Structural evaluation of phospholipid bicelles for solution-state studies of membrane-associated biomolecules
-
Glover KJ, Whiles JA, Wu G, Yu N, Deems R, Struppe JO, et al. Structural evaluation of phospholipid bicelles for solution-state studies of membrane-associated biomolecules. Biophys J 2001; 81:2163-71.
-
(2001)
Biophys J
, vol.81
, pp. 2163-2171
-
-
Glover, K.J.1
Whiles, J.A.2
Wu, G.3
Yu, N.4
Deems, R.5
Struppe, J.O.6
-
115
-
-
0035817357
-
Morphology of fast-tumbling bicelles: A small angle neutron scattering and NMR study
-
Luchette PA, Vetman TN, Prosser RS, Hancock RE, Nieh MP, Glinka CJ, et al. Morphology of fast-tumbling bicelles: a small angle neutron scattering and NMR study. Biochim Biophys Acta 2001; 1513:83-94.
-
(2001)
Biochim Biophys Acta
, vol.1513
, pp. 83-94
-
-
Luchette, P.A.1
Vetman, T.N.2
Prosser, R.S.3
Hancock, R.E.4
Nieh, M.P.5
Glinka, C.J.6
-
116
-
-
33746045690
-
Current applications of bicelles in NMR studies of membrane-associated amphiphiles and proteins
-
Prosser RS, Evanics F, Kitevski JL, Al-Abdul-Wahid MS. Current applications of bicelles in NMR studies of membrane-associated amphiphiles and proteins. Biochemistry 2006; 45:8453-65.
-
(2006)
Biochemistry
, vol.45
, pp. 8453-8465
-
-
Prosser, R.S.1
Evanics, F.2
Kitevski, J.L.3
Al-Abdul-Wahid, M.S.4
-
117
-
-
54049129612
-
Lipid dynamics in fast-tumbling bicelles with varying bilayer thickness: Effect of model transmembrane peptides
-
Lind J, Nordin J, Mäler L. Lipid dynamics in fast-tumbling bicelles with varying bilayer thickness: effect of model transmembrane peptides. Biochim Biophys Acta 2008; 1778:2526-34.
-
(2008)
Biochim Biophys Acta
, vol.1778
, pp. 2526-2534
-
-
Lind, J.1
Nordin, J.2
Mäler, L.3
-
118
-
-
0034113864
-
Acidic phospholipid bicelles: A versatile model membrane system
-
Struppe J, Whiles JA, Vold RR. Acidic phospholipid bicelles: a versatile model membrane system. Biophys J 2000; 78:281-9.
-
(2000)
Biophys J
, vol.78
, pp. 281-289
-
-
Struppe, J.1
Whiles, J.A.2
Vold, R.R.3
-
119
-
-
41449108071
-
Structure of the integrin beta3 transmembrane segment in phospholipid bicelles and detergent micelles
-
Lau TL, Partridge AW, Ginsberg MH, Ulmer TS. Structure of the integrin beta3 transmembrane segment in phospholipid bicelles and detergent micelles. Biochemistry 2008; 47:4008-16.
-
(2008)
Biochemistry
, vol.47
, pp. 4008-4016
-
-
Lau, T.L.1
Partridge, A.W.2
Ginsberg, M.H.3
Ulmer, T.S.4
-
121
-
-
33750022623
-
The structure of the zetazeta transmembrane dimer reveals features essential for its assembly with the T cell receptor
-
Call ME, Schnell JR, Xu C, Lutz RA, Chou JJ, Wucherpfennig KW. The structure of the zetazeta transmembrane dimer reveals features essential for its assembly with the T cell receptor. Cell 2006; 127:355-68.
-
(2006)
Cell
, vol.127
, pp. 355-368
-
-
Call, M.E.1
Schnell, J.R.2
Xu, C.3
Lutz, R.A.4
Chou, J.J.5
Wucherpfennig, K.W.6
-
122
-
-
24744447629
-
Methyl groups as probes of structure and dynamics in NMR studies of high-molecular-weight proteins
-
Tugarinov V, Kay LE. Methyl groups as probes of structure and dynamics in NMR studies of high-molecular-weight proteins. Chembiochem 2005; 6:1567-77.
-
(2005)
Chembiochem
, vol.6
, pp. 1567-1577
-
-
Tugarinov, V.1
Kay, L.E.2
-
123
-
-
0030808350
-
Methods for Measurement of Intermolecular NOEs by Multinuclear NMR Spectroscopy: Application to a Bacteriophage λ N-Peptide/boxB RNA Complex
-
Zwahlen C, Legault P, Vincent SJF, Greenblatt J, Konrat R, Kay LE. Methods for Measurement of Intermolecular NOEs by Multinuclear NMR Spectroscopy: Application to a Bacteriophage λ N-Peptide/boxB RNA Complex. J Am Chem Soc 1997; 119:6711-21.
-
(1997)
J Am Chem Soc
, vol.119
, pp. 6711-6721
-
-
Zwahlen, C.1
Legault, P.2
Vincent, S.J.F.3
Greenblatt, J.4
Konrat, R.5
Kay, L.E.6
-
125
-
-
0032932923
-
Nix and Nip3 form a subfamily of proapoptotic mitochondrial proteins
-
Chen G, Cizeau J, Vande Velde C, Park JH, Bozek G, Bolton J, et al. Nix and Nip3 form a subfamily of proapoptotic mitochondrial proteins. J Biol Chem 1999; 274:7-10.
-
(1999)
J Biol Chem
, vol.274
, pp. 7-10
-
-
Chen, G.1
Cizeau, J.2
Vande Velde, C.3
Park, J.H.4
Bozek, G.5
Bolton, J.6
-
126
-
-
20344396123
-
Eph receptor signalling casts a wide net on cell behaviour
-
Pasquale EB. Eph receptor signalling casts a wide net on cell behaviour. Nat Rev Mol Cell Biol 2005; 6:462-75.
-
(2005)
Nat Rev Mol Cell Biol
, vol.6
, pp. 462-475
-
-
Pasquale, E.B.1
-
127
-
-
77749318504
-
Left-handed dimer of EphA2 transmembrane domain: Helix packing diversity among receptor tyrosine kinases
-
Bocharov EV, Mayzel ML, Mineev KS, Tkach EN, Ermolyuk YS, Schulga AA, Arseniev AS. Left-handed dimer of EphA2 transmembrane domain: helix packing diversity among receptor tyrosine kinases. Biophysical J 2010; 98:881-9.
-
(2010)
Biophysical J
, vol.98
, pp. 881-889
-
-
Bocharov, E.V.1
Mayzel, M.L.2
Mineev, K.S.3
Tkach, E.N.4
Ermolyuk, Y.S.5
Schulga, A.A.6
Arseniev, A.S.7
-
128
-
-
33645130990
-
Signaling through ERBB receptors: Multiple layers of diversity and control
-
Warren CM, Landgraf R. Signaling through ERBB receptors: multiple layers of diversity and control. Cell Signal 2006; 18:923-33.
-
(2006)
Cell Signal
, vol.18
, pp. 923-933
-
-
Warren, C.M.1
Landgraf, R.2
-
129
-
-
55449102296
-
All EGF (ErbB) receptors have preformed homo- And heterodimeric structures in living cells
-
Tao RH, Maruyama IN. All EGF (ErbB) receptors have preformed homo- and heterodimeric structures in living cells. J Cell Sci 2008; 121:3207-17.
-
(2008)
J Cell Sci
, vol.121
, pp. 3207-3217
-
-
Tao, R.H.1
Maruyama, I.N.2
-
130
-
-
43749091771
-
Spatial structure of the dimeric transmembrane domain of the growth factor receptor ErbB2 presumably corresponding to the receptor active state
-
Bocharov EV, Mineev KS, Volynsky PE, Ermolyuk YS, Tkach EN, Sobol AG, et al. Spatial structure of the dimeric transmembrane domain of the growth factor receptor ErbB2 presumably corresponding to the receptor active state. J Biol Chem 2008; 283:6950-6.
-
(2008)
J Biol Chem
, vol.283
, pp. 6950-6956
-
-
Bocharov, E.V.1
Mineev, K.S.2
Volynsky, P.E.3
Ermolyuk, Y.S.4
Tkach, E.N.5
Sobol, A.G.6
-
131
-
-
67549145398
-
Mechanism for activation of the EGF receptor catalytic domain by the juxtamembrane segment
-
Jura N, Endres NF, Engel K, Deindl S, Das R, Lamers MH, et al. Mechanism for activation of the EGF receptor catalytic domain by the juxtamembrane segment. Cell 2009; 137:1293-307.
-
(2009)
Cell
, vol.137
, pp. 1293-1307
-
-
Jura, N.1
Endres, N.F.2
Engel, K.3
Deindl, S.4
Das, R.5
Lamers, M.H.6
-
132
-
-
0000717364
-
Hydrophobic nature of membrane-spanning α-helical peptides as revealed by Monte Carlo simulations and molecular hydrophobicity potential analysis
-
Efremov RG, Vergoten G. Hydrophobic nature of membrane-spanning α-helical peptides as revealed by Monte Carlo simulations and molecular hydrophobicity potential analysis. J Phys Chem 1995; 99:10658-66.
-
(1995)
J Phys Chem
, vol.99
, pp. 10658-10666
-
-
Efremov, R.G.1
Vergoten, G.2
|