Label-free quantification of activated NF-κB in biological samples by atomic force microscopy

Biosensors and Bioelectronics

Volumn 25, Issue 11, 2010, Pages 2490-2496

  Menotta, Michele ^a   Crinelli, Rita ^a   Carloni, Elisa ^a   Bianchi, Marzia ^a   Giacomini, Elisa ^a   Valbusa, Ugo ^b   Magnani, Mauro ^a  

^a UNIVERSITY OF URBINO   (Italy)

^b UNIVERSITY OF GENOA   (Italy)

Author keywords

AFM; Label free quantification; NF B

Indexed keywords

AFM; AFM IMAGE; AFM IMAGING; BINDING ACTIVITIES; BIOLOGICAL FLUIDS; BIOLOGICAL SAMPLES; CELL LYSATES; CONCENTRATION RANGES; CULTURED CELL; DNA BINDING; DNA BINDING ACTIVITY; ELECTROPHORETIC MOBILITY SHIFT ASSAY; ENZYME LINKED IMMUNOSORBENT ASSAY; FUNCTIONALIZATIONS; INFLAMMATORY DISEASE; INFLAMMATORY RESPONSE; LABEL FREE; NANO DEVICE; NUCLEAR FACTORS; PROTEIN COMPLEXES; TARGET SEQUENCES; TRANSCRIPTIONALLY ACTIVE;

BODY FLUIDS; COMPLEXATION; DNA; ELECTROPHORETIC MOBILITY; GENES; LABELS; MICA; SILICATE MINERALS; TRANSCRIPTION FACTORS;

ATOMIC FORCE MICROSCOPY;

IMMUNOGLOBULIN ENHANCER BINDING PROTEIN; DNA;

ANALYTIC METHOD; ARTICLE; ATOMIC FORCE MICROSCOPY; BINDING AFFINITY; BIOPSY; CELL LYSATE; COMPLEX FORMATION; CONTROLLED STUDY; DNA SEQUENCE; GEL MOBILITY SHIFT ASSAY; HUMAN; HUMAN CELL; HUMAN CELL CULTURE; IMAGE ANALYSIS; INTERMETHOD COMPARISON; LABEL FREE QUANTIFICATION; PROTEIN DNA BINDING; QUANTITATIVE ANALYSIS; TRANSCRIPTION INITIATION; HELA CELL LINE; MACROPHAGE; METABOLISM; PROCEDURES; PROTEIN ANALYSIS; STAINING;

DNA; HELA CELLS; HUMANS; MACROPHAGES; MICROSCOPY, ATOMIC FORCE; NF-KAPPA B; PROTEIN INTERACTION MAPPING; STAINING AND LABELING;

EID: 77953356079     PISSN: 09565663     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bios.2010.04.022     Document Type: Article

References (34)

1. Abdullah M., Sudoyo A.W., Pranowo B.S., Rini D., Sutrisna B., Rani A.A. Acta Med. Indones. 2009, 41(2):70-74.
2. Aggarwal B.B. Cancer Cell. 2004, 6(3):203-208.
3. Baeuerle P.A., Baltimore D. Genes Dev. 1989, 3(11):1689-1698.
4. Baldwin A.S. J. Clin. Invest. 2001, 107(1):3-6.
5. Barnes P.J., Karin M. N. Engl. J. Med. 1997, 336(15):1066-1071.
6. Chew J., Biswas S., Shreeram S., Humaidi M., Wong E.T., Dhillion M.K., Teo H., Hazra A., Fang C.C., Lopez-Collazo E., Bulavin D.V., Tergaonkar V. Nat. Cell Biol. 2009, 11(5):659-666.
7. Cilloni D., Martinelli G., Messa F., Baccarani M., Saglio G. Haematologica 2007, 92(9):1224-1229.
8. Crinelli R., Bianchi M., Gentilini L., Magnani M. Nucl. Acids Res. 2002, 30(11):2435-2443.
9. Crinelli R., Bianchi M., Gentilini L., Palma L., Sorensen M.D., Bryld T., Babu R.B., Arar K., Wengel J., Magnani M. Nucl. Acids Res. 2004, 32(6):1874-1885.
10. Fried M.G., Bromberg J.L. Electrophoresis 1997, 18(1):6-11.
11. Fried M.G., Liu G. Nucl. Acids Res. 1994, 22(23):5054-5059.
12. Gao N., Asamitsu K., Hibi Y., Ueno T., Okamoto T. J. Biol. Chem. 2008, 283(12):7834-7843.
13. Ghosh S., May M.J., Kopp E.B. Annu. Rev. Immunol. 1998, 16:225-260.
14. Handel M.L., McMorrow L.B., Gravallese E.M. Arthritis Rheum. 1995, 38(12):1762-1770.
15. Hoffmann A., Natoli G., Ghosh G. Oncogene 2006, 25(51):6706-6716.
16. Huang T.T., Kudo N., Yoshida M., Miyamoto S. Proc. Natl. Acad. Sci. USA 2000, 97(3):1014-1019.
17. Husale S., Persson H.H., Sahin O. Nature 2009, 462(7276):1075-1078.
18. Jeong S.J., Pise-Masison C.A., Radonovich M.F., Park H.U., Brady J.N. J. Biol. Chem. 2005, 280(11):10326-10332.
19. Jeru I., Duquesnoy P., Fernandes-Alnemri T., Cochet E., Yu J.W., Lackmy-Port-Lis M., Grimprel E., Landman-Parker J., Hentgen V., Marlin S., McElreavey K., Sarkisian T., Grateau G., Alnemri E.S., Amselem S. Proc. Natl. Acad. Sci. USA 2008, 105(5):1614-1619.
20. Kawakami K., Scheidereit C., Roeder R.G. Proc. Natl. Acad. Sci. USA 1988, 85(13):4700-4704.
21. Knowles T.P., Fitzpatrick A.W., Meehan S., Mott H.R., Vendruscolo M., Dobson C.M., Welland M.E. Science 2007, 318(5858):1900-1903.
22. Liu J., Yoshida Y., Yamashita U. Mol. Immunol. 2008, 45(15):3984-3989.
23. Malek S., Chen Y., Huxford T., Ghosh G. J. Biol. Chem. 2001, 276(48):45225-45235.
24. McDermott M.F., Aksentijevich I. Curr. Opin. Allergy Clin. Immunol. 2002, 2(6):511-516.
25. Moynagh P.N. J. Cell Sci. 2005, 118(Pt 20):4589-4592.
26. Sawada H., Mitani Y., Maruyama J., Jiang B.H., Ikeyama Y., Dida F.A., Yamamoto H., Imanaka-Yoshida K., Shimpo H., Mizoguchi A., Maruyama K., Komada Y. Chest 2007, 132(4):1265-1274.
27. Schneider S.W., Larmer J., Henderson R.M., Oberleithner H. Pflugers Arch. 1998, 435(3):362-367.
28. Senftleben U., Cao Y., Xiao G., Greten F.R., Krahn G., Bonizzi G., Chen Y., Hu Y., Fong A., Sun S.C., Karin M. Science 2001, 293(5534):1495-1499.
29. Seong G.H., Yanagida Y., Aizawa M., Kobatake E. Anal. Biochem. 2002, 309(2):241-247.
30. Sinensky A.K., Belcher A.M. Nat. Nanotechnol. 2007, 2(10):653-659.
31. Sweeney S.E., Firestein G.S. Curr. Opin. Rheumatol. 2004, 16(3):231-237.
32. Vossen K.M., Fried M.G. Anal. Biochem. 1997, 245(1):85-92.
33. Wong O.K., Guthold M., Erie D.A., Gelles J. PLoS Biol. 2008, 6(9). e232-
34. Zhou D., Sinniah K., Abell C., Rayment T. Angew. Chem. Int. Ed. Engl. 2003, 42(40):4934-4937.