-
1
-
-
0037162534
-
Punctuated evolution of mitochondrial gene content: High and variable rates of mitochondrial gene loss and transfer to the nucleus during angiosperm evolution
-
Adams KL, Qiu Y-L, Stoutemyer M, Palmer JD. 2002. Punctuated evolution of mitochondrial gene content: high and variable rates of mitochondrial gene loss and transfer to the nucleus during angiosperm evolution. Proc Natl Acad Sci USA. 99:9905-9912.
-
(2002)
Proc Natl Acad Sci USA.
, vol.99
, pp. 9905-9912
-
-
Adams, K.L.1
Qiu, Y.-L.2
Stoutemyer, M.3
Palmer, J.D.4
-
2
-
-
35548984339
-
Comparisons among two fertile and three male-sterile mito-chondrial genomes of maize
-
Allen JO, Fauron CM, Minx P, et al. (16 co-authors). 2007. Comparisons among two fertile and three male-sterile mito-chondrial genomes of maize. Genetics 177:1173-1192.
-
(2007)
Genetics
, vol.177
, pp. 1173-1192
-
-
Allen, J.O.1
Fauron, C.M.2
Minx, P.3
-
3
-
-
0026529575
-
Small repeated sequences and the structure of plant mitochondrial genomes
-
André C, Levy A, Walbot V. 1992. Small repeated sequences and the structure of plant mitochondrial genomes. Trends Genet. 8:128-132.
-
(1992)
Trends Genet.
, vol.8
, pp. 128-132
-
-
André, C.1
Levy, A.2
Walbot, V.3
-
4
-
-
0034800508
-
Phylogeny and subfamilial classification of the grasses (Poaceae)
-
Barker NP, Clark LG, Davis JI, et al. (13 co-authors). 2001. Phylogeny and subfamilial classification of the grasses (Poaceae). Ann Mo Bot Gard. 88:373-457.
-
(2001)
Ann Mo Bot Gard.
, vol.88
, pp. 373-457
-
-
Barker, N.P.1
Clark, L.G.2
Davis, J.I.3
-
5
-
-
65349185054
-
A one-megabase physical map provides insights on gene organization in the enormous mitochondrial genome of cucumber
-
Bartoszewski G, Gawronski P, Szklarczyk M, Verbakel H, Havey MJ. 2009. A one-megabase physical map provides insights on gene organization in the enormous mitochondrial genome of cucumber. Genome 52:299-307.
-
(2009)
Genome
, vol.52
, pp. 299-307
-
-
Bartoszewski, G.1
Gawronski, P.2
Szklarczyk, M.3
Verbakel, H.4
Havey, M.J.5
-
6
-
-
0029870907
-
Structural analysis of mitochondrial DNA molecules from fungi and plants using moving pictures and pulsed-field gel electrophoresis
-
Bendich AJ. 1996. Structural analysis of mitochondrial DNA molecules from fungi and plants using moving pictures and pulsed-field gel electrophoresis. J Mol Biol. 255:564-588.
-
(1996)
J Mol Biol.
, vol.255
, pp. 564-588
-
-
Bendich, A.J.1
-
7
-
-
11144228905
-
Massive horizontal transfer of mitochondrial genes from diverse land plant donors to the basal angiosperm Amborella
-
Bergthorsson U, Richardson AO, Young GJ, Goertzen LR, Palmer JD. 2004. Massive horizontal transfer of mitochondrial genes from diverse land plant donors to the basal angiosperm Amborella. Proc Natl Acad Sci USA. 101:17747-17752.
-
(2004)
Proc Natl Acad Sci USA.
, vol.101
, pp. 17747-17752
-
-
Bergthorsson, U.1
Richardson, A.O.2
Young, G.J.3
Goertzen, L.R.4
Palmer, J.D.5
-
8
-
-
0028386924
-
Rps3 and rpl16 genes do not overlap in Oenothera mitochondria: GTG as a potential translation initiation codon in plant mitochondria
-
Bock H, Brennicke A, Schuster W. 1994. rps3 and rpl16 genes do not overlap in Oenothera mitochondria: GTG as a potential translation initiation codon in plant mitochondria. Plant Mol Biol. 24:811-818.
-
(1994)
Plant Mol Biol.
, vol.24
, pp. 811-818
-
-
Bock, H.1
Brennicke, A.2
Schuster, W.3
-
9
-
-
39749142161
-
The mitochondrial genome of the gymnosperm Cycas taitungensis contains a novel family of short interspersed elements, Bpu sequences, and abundant RNA editing sites
-
Chaw SM, Shih ACC, Wang D, Wu YW, Liu SM, Chou TY. 2008. The mitochondrial genome of the gymnosperm Cycas taitungensis contains a novel family of short interspersed elements, Bpu sequences, and abundant RNA editing sites. Mol Biol Evol. 25:603-615.
-
(2008)
Mol Biol Evol.
, vol.25
, pp. 603-615
-
-
Chaw, S.M.1
Shih, A.C.C.2
Wang, D.3
Wu, Y.W.4
Liu, S.M.5
Chou, T.Y.6
-
10
-
-
13444252846
-
Different patterns in the recognition of editing sites in plant mitochondria
-
Choury D, Farre JC, Jordana X, Araya A. 2004. Different patterns in the recognition of editing sites in plant mitochondria. Nucleic Acids Res. 32:6397-6406.
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 6397-6406
-
-
Choury, D.1
Farre, J.C.2
Jordana, X.3
Araya, A.4
-
11
-
-
33749336062
-
The complete chloroplast genome sequence of Pelargonium x hortorum: Organization and evolution of the largest and most highly rearranged chloroplast genome of land plants
-
Chumley TW, Palmer JD, Mower JP, Fourcade HM, Calie PJ, BooreJL, Jansen RK. 2006. The complete chloroplast genome sequence of Pelargonium x hortorum: organization and evolution of the largest and most highly rearranged chloroplast genome of land plants. Mol Biol Evol. 23:2175-2190.
-
(2006)
Mol Biol Evol.
, vol.23
, pp. 2175-2190
-
-
Chumley, T.W.1
Palmer, J.D.2
Mower, J.P.3
Fourcade, H.M.4
Calie, P.J.5
Boorejl Jansen, R.K.6
-
12
-
-
11144234440
-
Sequence and comparative analysis of the maize NB mitochondrial genome
-
Clifton SW, Minx P, Fauron CMR, et al. (13 co-authors). 2004. Sequence and comparative analysis of the maize NB mitochondrial genome. Plant Physiol. 136:3486-3503.
-
(2004)
Plant Physiol.
, vol.136
, pp. 3486-3503
-
-
Clifton, S.W.1
Minx, P.2
Fauron, C.M.R.3
-
14
-
-
0040635946
-
Editing and import: Strategies for providing plant mitochondria with a complete set of functional transfer RNAs
-
Dietrich A, Small I, Cosset A, Weil JH, Marechal-Drouard L 1996. Editing and import: strategies for providing plant mitochondria with a complete set of functional transfer RNAs. Biochimie 78:518-529.
-
(1996)
Biochimie
, vol.78
, pp. 518-529
-
-
Dietrich, A.1
Small, I.2
Cosset, A.3
Weil, J.H.4
Marechal-Drouard, L.5
-
15
-
-
3042666256
-
MUSCLE: Multiple sequence alignment with high accuracy and high throughput
-
Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32: 1792-1797.
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
16
-
-
34547128656
-
Mapping of mitochondrial mRNA termini in Arabidopsis thaliana: T-elements contribute to 5' and 3' end formation
-
Forner J, Weber B, Thuss S, Wildum S, Binder S. 2007. Mapping of mitochondrial mRNA termini in Arabidopsis thaliana: t-elements contribute to 5' and 3' end formation. Nucleic Acids Res. 35:3676-3692.
-
(2007)
Nucleic Acids Res.
, vol.35
, pp. 3676-3692
-
-
Forner, J.1
Weber, B.2
Thuss, S.3
Wildum, S.4
Binder, S.5
-
17
-
-
0033592907
-
RNA editing in Arabidopsis mitochondria effects 441 C to U changes in ORFs
-
Giege P, Brennicke A. 1999. RNA editing in Arabidopsis mitochondria effects 441 C to U changes in ORFs. Proc Natl Acad Sci USA. 96:15324-15329.
-
(1999)
Proc Natl Acad Sci USA.
, vol.96
, pp. 15324-15329
-
-
Giege, P.1
Brennicke, A.2
-
18
-
-
0031782922
-
Complex II subunit 4 (sdh4) homologous sequences in plant mitochondrial genomes
-
Giege P, Knoop V, Brennicke A. 1998. Complex II subunit 4 (sdh4) homologous sequences in plant mitochondrial genomes. Curr Genet. 34:313-317.
-
(1998)
Curr Genet.
, vol.34
, pp. 313-317
-
-
Giege, P.1
Knoop, V.2
Brennicke, A.3
-
19
-
-
0031955116
-
Consed: A graphical tool for sequence finishing
-
Gordon D, Abajian C, Green P. 1998. Consed: a graphical tool for sequence finishing. Genome Res. 8:195-202.
-
(1998)
Genome Res.
, vol.8
, pp. 195-202
-
-
Gordon, D.1
Abajian, C.2
Green, P.3
-
20
-
-
57749192264
-
Mitochondrial DNA of Vitis vinifera and the issue of rampant horizontal gene transfer
-
Goremykin VV, Salamini F, Velasco R Viola R. 2009. Mitochondrial DNA of Vitis vinifera and the issue of rampant horizontal gene transfer. Mol Biol Evol. 26:99-110.
-
(2009)
Mol Biol Evol.
, vol.26
, pp. 99-110
-
-
Goremykin, V.V.1
Salamini, F.2
Velasco Viola R, R.3
-
21
-
-
69849093397
-
A trans-splicing group i intron and tRNA-hyperediting in the mitochondrial genome of the lycophyte Isoetes engelmannii
-
Grewe F, Viehoever P, Weisshaar B, Knoop V. 2009. A trans-splicing group I intron and tRNA-hyperediting in the mitochondrial genome of the lycophyte Isoetes engelmannii. Nucleic Acids Res. 37:5093-5104.
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 5093-5104
-
-
Grewe, F.1
Viehoever, P.2
Weisshaar, B.3
Knoop, V.4
-
22
-
-
0344442430
-
The complete nucleotide sequence and RNA editing content of the mitochondrial genome of rapeseed (Brassica napus L): Comparative analysis of the mitochondrial genomes of rapeseed and Arabidopsis thaliana
-
Handa H. 2003. The complete nucleotide sequence and RNA editing content of the mitochondrial genome of rapeseed (Brassica napus L): comparative analysis of the mitochondrial genomes of rapeseed and Arabidopsis thaliana. Nucleic Acids Res. 31:5907-5916.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 5907-5916
-
-
Handa, H.1
-
24
-
-
43049159700
-
Repeated big bangs and the expanding universe: Directionality in plant genome size evolution
-
Hawkins JS, Grover CE, Wendel JF. 2008. Repeated big bangs and the expanding universe: directionality in plant genome size evolution. Plant Sci. 174:557-562.
-
(2008)
Plant Sci.
, vol.174
, pp. 557-562
-
-
Hawkins, J.S.1
Grover, C.E.2
Wendel, J.F.3
-
26
-
-
0033004412
-
Cotran-scription of the rpl5-rps14-cob gene cluster in pea mitochondria
-
Hoffmann M, Dombrowski S, Guha C, Binder S. 1999. Cotran-scription of the rpl5-rps14-cob gene cluster in pea mitochondria. Mol Gen Genet. 261:537-545.
-
(1999)
Mol Gen Genet.
, vol.261
, pp. 537-545
-
-
Hoffmann, M.1
Dombrowski, S.2
Guha, C.3
Binder, S.4
-
27
-
-
0024749017
-
Physical characterization of the mitochondrial DNA from cotton
-
Hsu CL, Mullin BC. 1989. Physical characterization of the mitochondrial DNA from cotton. Plant Mol Biol. 13:467-468.
-
(1989)
Plant Mol Biol.
, vol.13
, pp. 467-468
-
-
Hsu, C.L.1
Mullin, B.C.2
-
28
-
-
0032849859
-
CAP3: A DNA sequence assembly program
-
Huang X, Madan A. 1999. CAP3: a DNA sequence assembly program. Genome Res. 9:868-877.
-
(1999)
Genome Res.
, vol.9
, pp. 868-877
-
-
Huang, X.1
Madan, A.2
-
29
-
-
0034284437
-
Repbase update: A database and an electronic journal of repetitive elements.
-
Jurka J. 2000. Repbase update: a database and an electronic journal of repetitive elements. Trends Genet. 16:418-420.
-
(2000)
Trends Genet.
, vol.16
, pp. 418-420
-
-
Jurka, J.1
-
30
-
-
12044255284
-
Linking phylogeny and genetics: Zea mays as a tool for phylogenetic studies
-
Kellogg EA, Birchler JA. 1993. Linking phylogeny and genetics: Zea mays as a tool for phylogenetic studies. Syst Biol. 42:415-439.
-
(1993)
Syst Biol.
, vol.42
, pp. 415-439
-
-
Kellogg, E.A.1
Birchler, J.A.2
-
32
-
-
4744343662
-
The mitochondrial DNA of land plants: Peculiarities in phylogenetic perspective
-
Knoop V. 2004. The mitochondrial DNA of land plants: peculiarities in phylogenetic perspective. Curr Genet. 46:123-139.
-
(2004)
Curr Genet.
, vol.46
, pp. 123-139
-
-
Knoop, V.1
-
33
-
-
0029670967
-
Copia-, gypsy-and LINE-like retrotransposon fragments in the mitochondrial genome of Arabidopsis thaliana
-
Knoop V, Unseld M, Marienfeld J, Brandt P, Sunkel S, Ullrich H, Brennicke A. 1996. copia-, gypsy-and LINE-like retrotransposon fragments in the mitochondrial genome of Arabidopsis thaliana. Genetics 142:579-585.
-
(1996)
Genetics
, vol.142
, pp. 579-585
-
-
Knoop, V.1
Unseld, M.2
Marienfeld, J.3
Brandt, P.4
Sunkel, S.5
Ullrich, H.6
Brennicke, A.7
-
34
-
-
0015366369
-
Physicochemical characterization of mitochondrial DNA from pea leaves
-
Kolodner R, Tewari KK. 1972. Physicochemical characterization of mitochondrial DNA from pea leaves. Proc Natl Acad Sci USA. 69:1830-1834.
-
(1972)
Proc Natl Acad Sci USA.
, vol.69
, pp. 1830-1834
-
-
Kolodner, R.1
Tewari, K.K.2
-
35
-
-
33845679903
-
Organization and variation of angiosperm mitochondrial genome
-
Kubo T, Mikami T. 2007. Organization and variation of angiosperm mitochondrial genome. Physiol Plant. 129:6-13.
-
(2007)
Physiol Plant.
, vol.129
, pp. 6-13
-
-
Kubo, T.1
Mikami, T.2
-
36
-
-
37249058160
-
Angiosperm mitochondrial genomes and mutations
-
Kubo T, Newton KJ. 2008. Angiosperm mitochondrial genomes and mutations. Mitochondrion 8:5-14.
-
(2008)
Mitochondrion
, vol.8
, pp. 5-14
-
-
Kubo, T.1
Newton, K.J.2
-
37
-
-
67349286953
-
The complete mitochondrial genome sequence of the hornwort Megaceros aenigmaticus shows a mixed mode of conservative yet dynamic evolution in early land plant mitochondrial genomes
-
Li LB, Wang B, Liu Y, Qiu YL. 2009. The complete mitochondrial genome sequence of the hornwort Megaceros aenigmaticus shows a mixed mode of conservative yet dynamic evolution in early land plant mitochondrial genomes. J Mol Evol. 68:665-678.
-
(2009)
J Mol Evol.
, vol.68
, pp. 665-678
-
-
Li, L.B.1
Wang, B.2
Liu, Y.3
Qiu, Y.L.4
-
38
-
-
0034815350
-
Small, repetitive DNAs contribute significantly to the expanded mitochondrial genome of cucumber
-
Lilly JW, Havey MJ. 2001. Small, repetitive DNAs contribute significantly to the expanded mitochondrial genome of cucumber. Genetics 159:317-328.
-
(2001)
Genetics
, vol.159
, pp. 317-328
-
-
Lilly, J.W.1
Havey, M.J.2
-
39
-
-
36048989002
-
OrganellarGenomeDRAW (OGDRAW): A tool for the easy generation of high-quality custom graphical maps of plastid and mitochondrial genomes
-
Lohse M, Drechsel O, Bock R. 2007. OrganellarGenomeDRAW (OGDRAW): a tool for the easy generation of high-quality custom graphical maps of plastid and mitochondrial genomes. Curr Genet. 52:267-274.
-
(2007)
Curr Genet.
, vol.52
, pp. 267-274
-
-
Lohse, M.1
Drechsel, O.2
Bock, R.3
-
40
-
-
0001138481
-
The plant mitochondrial genome: Homologous recombination as a mechanism for generating heterogeneity
-
Lonsdale DM, Brears T, Hodge TP, Melville SE, Rottmann WH. 1988. The plant mitochondrial genome: homologous recombination as a mechanism for generating heterogeneity. Philos Trans R Soc Lond B Biol Sci. 319:149-163.
-
(1988)
Philos Trans R Soc Lond B Biol Sci.
, vol.319
, pp. 149-163
-
-
Lonsdale, D.M.1
Brears, T.2
Hodge, T.P.3
Melville, S.E.4
Rottmann, W.H.5
-
41
-
-
0030854739
-
TRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence
-
Lowe TM, Eddy SR. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25:955-964.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 955-964
-
-
Lowe, T.M.1
Eddy, S.R.2
-
42
-
-
30744475434
-
The origins of eukaryotic gene structure
-
Lynch M. 2006. The origins of eukaryotic gene structure. Mol Biol Evol. 23:450-468.
-
(2006)
Mol Biol Evol.
, vol.23
, pp. 450-468
-
-
Lynch, M.1
-
43
-
-
77952840306
-
Testing genome complexity\response
-
Lynch M, Conery JS. 2004. Testing genome complexity\response. Science 304:390.
-
(2004)
Science
, vol.304
, pp. 390
-
-
Lynch, M.1
Conery, J.S.2
-
44
-
-
33645214213
-
Mutation pressure and the evolution of organelle genomic architecture
-
Lynch M, Koskella B, Schaack S. 2006. Mutation pressure and the evolution of organelle genomic architecture. Science 311: 1727-1730.
-
(2006)
Science
, vol.311
, pp. 1727-1730
-
-
Lynch, M.1
Koskella, B.2
Schaack, S.3
-
45
-
-
0036241181
-
Phylogeny of Andropogoneae inferred from phytochrome B, GBSSI, and NDHF
-
Mathews S, Spangler RE, Mason-Gamer RJ, Kellogg EA. 2002. Phylogeny of Andropogoneae inferred from phytochrome B, GBSSI, and NDHF. Int J Plant Sci. 163:441-450.
-
(2002)
Int J Plant Sci.
, vol.163
, pp. 441-450
-
-
Mathews, S.1
Spangler, R.E.2
Mason-Gamer, R.J.3
Kellogg, E.A.4
-
46
-
-
0036845754
-
The Chlamydomonas reinhardtti plastid chromosome: Islands of genes in a sea of repeats.
-
Maul JE, Lilly JW, Cui LY, dePamphilis CW, Miller W, Harris EH, Stern DB. 2002. The Chlamydomonas reinhardtti plastid chromosome: islands of genes in a sea of repeats. Plant Cell. 14:2659-2679.
-
(2002)
Plant Cell.
, vol.14
, pp. 2659-2679
-
-
Maul, J.E.1
Lilly, J.W.2
Cui, L.Y.3
Depamphilis, C.W.4
Miller, W.5
Harris, E.H.6
Stern, D.B.7
-
47
-
-
0037040394
-
Microbial minimalism: Genome reduction in bacterial pathogens
-
Moran NA. 2002. Microbial minimalism: genome reduction in bacterial pathogens. Cell 108:583-586.
-
(2002)
Cell
, vol.108
, pp. 583-586
-
-
Moran, N.A.1
-
48
-
-
67849095411
-
The PREP suite: Predictive RNA editors for plant mitochondrial genes, chloroplast genes and user-defined alignments
-
Mower JP. 2009. The PREP suite: predictive RNA editors for plant mitochondrial genes, chloroplast genes and user-defined alignments. Nucleic Acids Res. 37:W253-W259.
-
(2009)
Nucleic Acids Res.
, vol.37
-
-
Mower, J.P.1
-
49
-
-
33747613063
-
Patterns of partial RNA editing in mitochondrial genes of Beta vulgaris
-
Mower JP, Palmer JD. 2006. Patterns of partial RNA editing in mitochondrial genes of Beta vulgaris. Mol Genet Genomics. 276:285-293.
-
(2006)
Mol Genet Genomics.
, vol.276
, pp. 285-293
-
-
Mower, J.P.1
Palmer, J.D.2
-
50
-
-
34548568981
-
Extensive variation in synonymous substitution rates in mitochondrial genes of seed plants
-
Mower JP, Touzet P, Gummow JS, Delph LF, Palmer JD. 2007. Extensive variation in synonymous substitution rates in mitochondrial genes of seed plants. BMC Evol Biol. 7:135.
-
(2007)
BMC Evol Biol.
, vol.7
, pp. 135
-
-
Mower, J.P.1
Touzet, P.2
Gummow, J.S.3
Delph, L.F.4
Palmer, J.D.5
-
51
-
-
35748939098
-
Computational analysis of RNA editing sites in plant mitochondrial genomes reveals similar information content and a sporadic distribution of editing sites
-
Mulligan RM, Chang KL, Chou CC. 2007. Computational analysis of RNA editing sites in plant mitochondrial genomes reveals similar information content and a sporadic distribution of editing sites. Mol Biol Evol. 24:1971-1981.
-
(2007)
Mol Biol Evol.
, vol.24
, pp. 1971-1981
-
-
Mulligan, R.M.1
Chang, K.L.2
Chou, C.C.3
-
52
-
-
34147178397
-
High-throughput RFLP genotyping method for large genomes based on a chemiluminescent detection system
-
Nakazato T, Gastony GJ. 2006. High-throughput RFLP genotyping method for large genomes based on a chemiluminescent detection system. Plant Mol Biol Rep. 24:245a-245f.
-
(2006)
Plant Mol Biol Rep.
, vol.24
-
-
Nakazato, T.1
Gastony, G.J.2
-
53
-
-
0031895184
-
Contrasting mitochondrial genome organizations and sequence affiliations among green algae: Potential factors, mechanisms, and evolutionary scenarios
-
Nedelcu AM. 1998. Contrasting mitochondrial genome organizations and sequence affiliations among green algae: potential factors, mechanisms, and evolutionary scenarios. J Phycol. 34:16-28.
-
(1998)
J Phycol.
, vol.34
, pp. 16-28
-
-
Nedelcu, A.M.1
-
54
-
-
0036456491
-
The complete sequence of the rice (Oryza sativa L.) mitochondrial genome: Frequent DNA sequence acquisition and loss during the evolution of flowering plants
-
Notsu Y, Masood S, Nishikawa T, Kubo N, Akiduki G, Nakazono M, Hirai A, Kadowaki K. 2002. The complete sequence of the rice (Oryza sativa L.) mitochondrial genome: frequent DNA sequence acquisition and loss during the evolution of flowering plants. Mol Genet Genomics. 268:434-445.
-
(2002)
Mol Genet Genomics.
, vol.268
, pp. 434-445
-
-
Notsu, Y.1
Masood, S.2
Nishikawa, T.3
Kubo, N.4
Akiduki, G.5
Nakazono, M.6
Hirai, A.7
Kadowaki, K.8
-
55
-
-
42049092254
-
Chromatophore genome sequence of Paulinella sheds light on acquisition of photosynthesis by eukaryotes
-
Nowack ECM, Melkonian M, Glockner G. 2008. Chromatophore genome sequence of Paulinella sheds light on acquisition of photosynthesis by eukaryotes. Curr Biol. 18:410-418.
-
(2008)
Curr Biol.
, vol.18
, pp. 410-418
-
-
Nowack, E.C.M.1
Melkonian, M.2
Glockner, G.3
-
56
-
-
0020480195
-
Physical and gene mapping of chloroplast DNA from Atriplex triangularis and Cucumis sativa
-
Palmer JD. 1982. Physical and gene mapping of chloroplast DNA from Atriplex triangularis and Cucumis sativa. Nucleic Acids Res. 10:1593-1605.
-
(1982)
Nucleic Acids Res.
, vol.10
, pp. 1593-1605
-
-
Palmer, J.D.1
-
57
-
-
0025249858
-
Contrasting modes and tempos of genome evolution in land plant organelles
-
Palmer JD. 1990. Contrasting modes and tempos of genome evolution in land plant organelles. Trends Genet. 6:115-120.
-
(1990)
Trends Genet.
, vol.6
, pp. 115-120
-
-
Palmer, J.D.1
-
58
-
-
0024259002
-
Plant mitochondrial DNA evolves rapidly in structure, but slowly in sequence
-
Palmer JD, Herbon LA. 1989. Plant mitochondrial DNA evolves rapidly in structure, but slowly in sequence. J Mol Evol. 28:87-97.
-
(1989)
J Mol Evol.
, vol.28
, pp. 87-97
-
-
Palmer, J.D.1
Herbon, L.A.2
-
59
-
-
0029893142
-
Conservation of the organization of the mitochondrial nad3 and rps12 genes in evolutionarily distant angiosperms
-
Perrotta G, Regina TMR, Ceci LR, Quagliariello C. 1996. Conservation of the organization of the mitochondrial nad3 and rps12 genes in evolutionarily distant angiosperms. Mol Gen Genet. 251:326-337.
-
(1996)
Mol Gen Genet.
, vol.251
, pp. 326-337
-
-
Perrotta, G.1
Regina, T.M.R.2
Ceci, L.R.3
Quagliariello, C.4
-
60
-
-
33748955739
-
Comparison of promoters controlling on the sunflower mitochondrial genome the transcription of two copies of the same native trnK gene reveals some differences in their structure
-
Placido A, Damiano F, Sciancalepore M, De Benedetto C, Rainaldi G, Gallerani R. 2006. Comparison of promoters controlling on the sunflower mitochondrial genome the transcription of two copies of the same native trnK gene reveals some differences in their structure. Biochim Biophys Acta. 1757:1207-1216.
-
(2006)
Biochim Biophys Acta.
, vol.1757
, pp. 1207-1216
-
-
Placido, A.1
Damiano, F.2
Sciancalepore, M.3
De Benedetto, C.4
Rainaldi, G.5
Gallerani, R.6
-
61
-
-
0017369983
-
Heterogeneous population of mitochon-drial DNA molecules in higher plants
-
Quetier F, Vedel F. 1977. Heterogeneous population of mitochon-drial DNA molecules in higher plants. Nature 268:365-368.
-
(1977)
Nature
, vol.268
, pp. 365-368
-
-
Quetier, F.1
Vedel, F.2
-
62
-
-
0030197641
-
The rpl5-rps14-cob gene arrangement in Solanum tuberosum: Rps14 is a transcribed and unedited pseudogene
-
Quiñones V, Zanlungo S, Moenne A, Gomez I, Holuigue L, Litvak S, Jordana X. 1996. The rpl5-rps14-cob gene arrangement in Solanum tuberosum: rps14 is a transcribed and unedited pseudogene. Plant Mol Biol. 31:937-943.
-
(1996)
Plant Mol Biol.
, vol.31
, pp. 937-943
-
-
Quiñones, V.1
Zanlungo, S.2
Moenne, A.3
Gomez, I.4
Holuigue, L.5
Litvak, S.6
Jordana, X.7
-
64
-
-
67149146195
-
An integrated genetic and cytogenetic map of the cucumber genome.
-
Ren Y, Zhang Z, Liu J, et al. (16 co-authors). 2009. An integrated genetic and cytogenetic map of the cucumber genome. PLoS ONE. 4:e5795.
-
(2009)
PLoS ONE.
, vol.4
-
-
Ren, Y.1
Zhang, Z.2
Liu, J.3
-
65
-
-
33845904639
-
Horizontal gene transfer in plants
-
Richardson AO, Palmer JD. 2007. Horizontal gene transfer in plants. J Exp Bot. 58:1-9.
-
(2007)
J Exp Bot.
, vol.58
, pp. 1-9
-
-
Richardson, A.O.1
Palmer, J.D.2
-
66
-
-
0031215039
-
An unusual mitochondrial atp9-rpl16 cotranscript found in the maternal distorted leaf mutant of Arabidopsis thaliana: Implication of GUG as an initiation codon in plant mitochondria
-
Sakamoto W, Tan SH, Murata M, Motoyoshi F. 1997. An unusual mitochondrial atp9-rpl16 cotranscript found in the maternal distorted leaf mutant of Arabidopsis thaliana: implication of GUG as an initiation codon in plant mitochondria. Plant Cell Physiol. 38:975-979.
-
(1997)
Plant Cell Physiol.
, vol.38
, pp. 975-979
-
-
Sakamoto, W.1
Tan, S.H.2
Murata, M.3
Motoyoshi, F.4
-
67
-
-
47649085332
-
Frequent, phylogenetically local horizontal transfer of the cox1 group i intron in flowering plant mitochondria
-
Sanchez-Puerta MV, Cho Y, Mower JP, Alverson AJ, Palmer JD. 2008. Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria. Mol Biol Evol. 25:1762-1777.
-
(2008)
Mol Biol Evol.
, vol.25
, pp. 1762-1777
-
-
Sanchez-Puerta, M.V.1
Cho, Y.2
Mower, J.P.3
Alverson, A.J.4
Palmer, J.D.5
-
68
-
-
33745809847
-
The Owen mitochondrial genome in sugar beet (Beta vulgaris L.): Possible mechanisms of extensive rearrangements and the origin of the mitotype-unique regions
-
Satoh M, Kubo T, Mikami T. 2006. The Owen mitochondrial genome in sugar beet (Beta vulgaris L.): possible mechanisms of extensive rearrangements and the origin of the mitotype-unique regions. Theor Appl Genet. 113:477-484.
-
(2006)
Theor Appl Genet.
, vol.113
, pp. 477-484
-
-
Satoh, M.1
Kubo, T.2
Mikami, T.3
-
69
-
-
8644286140
-
The cytoplasmic male-sterile type and normal type mitochon-drial genomes of sugar beet share the same complement of genes of known function but differ in the content of expressed ORFs
-
Satoh M, Kubo T, Nishizawa S, Estiati A, Itchoda N, Mikami T. 2004. The cytoplasmic male-sterile type and normal type mitochon-drial genomes of sugar beet share the same complement of genes of known function but differ in the content of expressed ORFs. Mol Genet Genomics. 272:247-256.
-
(2004)
Mol Genet Genomics.
, vol.272
, pp. 247-256
-
-
Satoh, M.1
Kubo, T.2
Nishizawa, S.3
Estiati, A.4
Itchoda, N.5
Mikami, T.6
-
70
-
-
63849264446
-
Gourds afloat: A dated phylogeny reveals an Asian origin of the gourd family (Cucurbitaceae) and numerous oversea dispersal events
-
Schaefer H, Heibl C, Renner SS. 2009. Gourds afloat: a dated phylogeny reveals an Asian origin of the gourd family (Cucurbitaceae) and numerous oversea dispersal events. Proc Biol Sci. 276:843-851.
-
(2009)
Proc Biol Sci.
, vol.276
, pp. 843-851
-
-
Schaefer, H.1
Heibl, C.2
Renner, S.S.3
-
71
-
-
44849098142
-
Nucleotide diversity in the mitochondrial and nuclear compartments of Chlamydomonas reinhardtii: Investigating the origins of genome architecture
-
Smith DR, Lee RW. 2008. Nucleotide diversity in the mitochondrial and nuclear compartments of Chlamydomonas reinhardtii: investigating the origins of genome architecture. BMC Evol Biol. 8:156.
-
(2008)
BMC Evol Biol.
, vol.8
, pp. 156
-
-
Smith, D.R.1
Lee, R.W.2
-
72
-
-
67649519425
-
Nucleotide diversity of the Chlamydo-monas reinhardtii plastid genome: Addressing the mutational-hazard hypothesis
-
Smith DR, Lee RW. 2009a. Nucleotide diversity of the Chlamydo-monas reinhardtii plastid genome: addressing the mutational-hazard hypothesis. BMC Evol Biol. 9:120.
-
(2009)
BMC Evol Biol.
, vol.9
, pp. 120
-
-
Smith, D.R.1
Lee, R.W.2
-
73
-
-
65249087231
-
The mitochondrial and plastid genomes of Volvox carteri: Bloated molecules rich in repetitive DNA
-
Smith DR, Lee RW. 2009b. The mitochondrial and plastid genomes of Volvox carteri: bloated molecules rich in repetitive DNA. BMC Genomics. 10:14.
-
(2009)
BMC Genomics.
, vol.10
, pp. 14
-
-
Smith, D.R.1
Lee, R.W.2
-
74
-
-
0033838109
-
Angiosperm phylogeny inferred from 18S rDNA, rbcL, and atpB sequences
-
Soltis DE, Soltis PS, Chase MW, Mort ME, Albach DC, Zanis M, Savolainen V, Hahn WH, Hoot SB, Fay MF. 2000. Angiosperm phylogeny inferred from 18S rDNA, rbcL, and atpB sequences. Bot J Linn Soc. 133:381-461.
-
(2000)
Bot J Linn Soc.
, vol.133
, pp. 381-461
-
-
Soltis, D.E.1
Soltis, P.S.2
Chase, M.W.3
Mort, M.E.4
Albach, D.C.5
Zanis, M.6
Savolainen, V.7
Hahn, W.H.8
Hoot, S.B.9
Fay, M.F.10
-
75
-
-
0019984101
-
Mitochondrial and chloroplast genomes of maize have a 12-kilobase DNA sequence in common
-
Stern DB, Lonsdale DM. 1982. Mitochondrial and chloroplast genomes of maize have a 12-kilobase DNA sequence in common. Nature 299:698-702.
-
(1982)
Nature
, vol.299
, pp. 698-702
-
-
Stern, D.B.1
Lonsdale, D.M.2
-
76
-
-
0022163464
-
Mitochondrial gene expression in Cucurbitaceae: Conserved and variable features
-
Stern DB, Newton KJ. 1985. Mitochondrial gene expression in Cucurbitaceae: conserved and variable features. Curr Genet. 9:395-405.
-
(1985)
Curr Genet.
, vol.9
, pp. 395-405
-
-
Stern, D.B.1
Newton, K.J.2
-
77
-
-
77952853490
-
Mitochondrial DNA sequence evolution and homology to chloroplast DNA in angiosperms
-
Goldberg RB, editor New York: Alan R. Liss, Inc
-
Stern DB, Palmer JD, Thompson WF, Lonsdale DM. 1983. Mitochondrial DNA sequence evolution and homology to chloroplast DNA in angiosperms. In: Goldberg RB, editor. Plant molecular biology, ICN-UCLA symposia on molecular and cellular biology. New York: Alan R. Liss, Inc. p. 467-477
-
(1983)
Plant Molecular Biology, ICN-UCLA Symposia on Molecular and Cellular Biology
, pp. 467-477
-
-
Stern, D.B.1
Palmer, J.D.2
Thompson, W.F.3
Lonsdale, D.M.4
-
78
-
-
0026777563
-
Gene clusters for ribosomal proteins in the mitochondrial genome of a liverwort, Marchantia polymorpha
-
Takemura M, Oda K, Yamato K, Ohta E, Nakamura Y, Nozato N, Akashi K, Ohyama K. 1992. Gene clusters for ribosomal proteins in the mitochondrial genome of a liverwort, Marchantia polymorpha. Nucleic Acids Res. 20:3199-3205.
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 3199-3205
-
-
Takemura, M.1
Oda, K.2
Yamato, K.3
Ohta, E.4
Nakamura, Y.5
Nozato, N.6
Akashi, K.7
Ohyama, K.8
-
79
-
-
0031021278
-
The mitochondrial genome of Arabidopsis thaliana contains 57 genes in 366,924 nucleotides
-
Unseld M, Marienfeld JR, Brandt P, Brennicke A. 1997. The mitochondrial genome of Arabidopsis thaliana contains 57 genes in 366,924 nucleotides. Nat Genet. 15:57-61.
-
(1997)
Nat Genet.
, vol.15
, pp. 57-61
-
-
Unseld, M.1
Marienfeld, J.R.2
Brandt, P.3
Brennicke, A.4
-
80
-
-
1942520266
-
Testing genome complexity
-
Vinogradov AE. 2004. Testing genome complexity. Science 304: 389-390.
-
(2004)
Science
, vol.304
, pp. 389-390
-
-
Vinogradov, A.E.1
-
81
-
-
0019441235
-
The size of the mitochondrial genome is large and variable in a family of plants (Cucurbita-ceae)
-
Ward B, Anderson R, Bendich A. 1981. The size of the mitochondrial genome is large and variable in a family of plants (Cucurbita-ceae). Cell 25:793-803.
-
(1981)
Cell
, vol.25
, pp. 793-803
-
-
Ward, B.1
Anderson, R.2
Bendich, A.3
-
82
-
-
0023462635
-
Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs
-
Wolfe KH, Li WH, Sharp PM. 1987. Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs. Proc Natl Acad Sci USA. 84:9054-9058.
-
(1987)
Proc Natl Acad Sci USA.
, vol.84
, pp. 9054-9058
-
-
Wolfe, K.H.1
Li, W.H.2
Sharp, P.M.3
-
83
-
-
10244240599
-
Automatic annotation of organellar genomes with DOGMA
-
Wyman SK, Jansen RK, Boore JL. 2004. Automatic annotation of organellar genomes with DOGMA. Bioinformatics 20: 3252-3255.
-
(2004)
Bioinformatics
, vol.20
, pp. 3252-3255
-
-
Wyman, S.K.1
Jansen, R.K.2
Boore, J.L.3
|