메뉴 건너뛰기




Volumn 27, Issue 6, 2010, Pages 1436-1448

Insights into the evolution of mitochondrial genome size from complete sequences of citrullus lanatus and cucurbita pepo (Cucurbitaceae)

Author keywords

Cucurbitaceae; Genome size; Mitochondria; Mutation rate; RNA editing

Indexed keywords

DNA; RNA;

EID: 77952837838     PISSN: 07374038     EISSN: 15371719     Source Type: Journal    
DOI: 10.1093/molbev/msq029     Document Type: Article
Times cited : (389)

References (83)
  • 1
    • 0037162534 scopus 로고    scopus 로고
    • Punctuated evolution of mitochondrial gene content: High and variable rates of mitochondrial gene loss and transfer to the nucleus during angiosperm evolution
    • Adams KL, Qiu Y-L, Stoutemyer M, Palmer JD. 2002. Punctuated evolution of mitochondrial gene content: high and variable rates of mitochondrial gene loss and transfer to the nucleus during angiosperm evolution. Proc Natl Acad Sci USA. 99:9905-9912.
    • (2002) Proc Natl Acad Sci USA. , vol.99 , pp. 9905-9912
    • Adams, K.L.1    Qiu, Y.-L.2    Stoutemyer, M.3    Palmer, J.D.4
  • 2
    • 35548984339 scopus 로고    scopus 로고
    • Comparisons among two fertile and three male-sterile mito-chondrial genomes of maize
    • Allen JO, Fauron CM, Minx P, et al. (16 co-authors). 2007. Comparisons among two fertile and three male-sterile mito-chondrial genomes of maize. Genetics 177:1173-1192.
    • (2007) Genetics , vol.177 , pp. 1173-1192
    • Allen, J.O.1    Fauron, C.M.2    Minx, P.3
  • 3
    • 0026529575 scopus 로고
    • Small repeated sequences and the structure of plant mitochondrial genomes
    • André C, Levy A, Walbot V. 1992. Small repeated sequences and the structure of plant mitochondrial genomes. Trends Genet. 8:128-132.
    • (1992) Trends Genet. , vol.8 , pp. 128-132
    • André, C.1    Levy, A.2    Walbot, V.3
  • 4
    • 0034800508 scopus 로고    scopus 로고
    • Phylogeny and subfamilial classification of the grasses (Poaceae)
    • Barker NP, Clark LG, Davis JI, et al. (13 co-authors). 2001. Phylogeny and subfamilial classification of the grasses (Poaceae). Ann Mo Bot Gard. 88:373-457.
    • (2001) Ann Mo Bot Gard. , vol.88 , pp. 373-457
    • Barker, N.P.1    Clark, L.G.2    Davis, J.I.3
  • 5
    • 65349185054 scopus 로고    scopus 로고
    • A one-megabase physical map provides insights on gene organization in the enormous mitochondrial genome of cucumber
    • Bartoszewski G, Gawronski P, Szklarczyk M, Verbakel H, Havey MJ. 2009. A one-megabase physical map provides insights on gene organization in the enormous mitochondrial genome of cucumber. Genome 52:299-307.
    • (2009) Genome , vol.52 , pp. 299-307
    • Bartoszewski, G.1    Gawronski, P.2    Szklarczyk, M.3    Verbakel, H.4    Havey, M.J.5
  • 6
    • 0029870907 scopus 로고    scopus 로고
    • Structural analysis of mitochondrial DNA molecules from fungi and plants using moving pictures and pulsed-field gel electrophoresis
    • Bendich AJ. 1996. Structural analysis of mitochondrial DNA molecules from fungi and plants using moving pictures and pulsed-field gel electrophoresis. J Mol Biol. 255:564-588.
    • (1996) J Mol Biol. , vol.255 , pp. 564-588
    • Bendich, A.J.1
  • 7
    • 11144228905 scopus 로고    scopus 로고
    • Massive horizontal transfer of mitochondrial genes from diverse land plant donors to the basal angiosperm Amborella
    • Bergthorsson U, Richardson AO, Young GJ, Goertzen LR, Palmer JD. 2004. Massive horizontal transfer of mitochondrial genes from diverse land plant donors to the basal angiosperm Amborella. Proc Natl Acad Sci USA. 101:17747-17752.
    • (2004) Proc Natl Acad Sci USA. , vol.101 , pp. 17747-17752
    • Bergthorsson, U.1    Richardson, A.O.2    Young, G.J.3    Goertzen, L.R.4    Palmer, J.D.5
  • 8
    • 0028386924 scopus 로고
    • Rps3 and rpl16 genes do not overlap in Oenothera mitochondria: GTG as a potential translation initiation codon in plant mitochondria
    • Bock H, Brennicke A, Schuster W. 1994. rps3 and rpl16 genes do not overlap in Oenothera mitochondria: GTG as a potential translation initiation codon in plant mitochondria. Plant Mol Biol. 24:811-818.
    • (1994) Plant Mol Biol. , vol.24 , pp. 811-818
    • Bock, H.1    Brennicke, A.2    Schuster, W.3
  • 9
    • 39749142161 scopus 로고    scopus 로고
    • The mitochondrial genome of the gymnosperm Cycas taitungensis contains a novel family of short interspersed elements, Bpu sequences, and abundant RNA editing sites
    • Chaw SM, Shih ACC, Wang D, Wu YW, Liu SM, Chou TY. 2008. The mitochondrial genome of the gymnosperm Cycas taitungensis contains a novel family of short interspersed elements, Bpu sequences, and abundant RNA editing sites. Mol Biol Evol. 25:603-615.
    • (2008) Mol Biol Evol. , vol.25 , pp. 603-615
    • Chaw, S.M.1    Shih, A.C.C.2    Wang, D.3    Wu, Y.W.4    Liu, S.M.5    Chou, T.Y.6
  • 10
    • 13444252846 scopus 로고    scopus 로고
    • Different patterns in the recognition of editing sites in plant mitochondria
    • Choury D, Farre JC, Jordana X, Araya A. 2004. Different patterns in the recognition of editing sites in plant mitochondria. Nucleic Acids Res. 32:6397-6406.
    • (2004) Nucleic Acids Res. , vol.32 , pp. 6397-6406
    • Choury, D.1    Farre, J.C.2    Jordana, X.3    Araya, A.4
  • 11
    • 33749336062 scopus 로고    scopus 로고
    • The complete chloroplast genome sequence of Pelargonium x hortorum: Organization and evolution of the largest and most highly rearranged chloroplast genome of land plants
    • Chumley TW, Palmer JD, Mower JP, Fourcade HM, Calie PJ, BooreJL, Jansen RK. 2006. The complete chloroplast genome sequence of Pelargonium x hortorum: organization and evolution of the largest and most highly rearranged chloroplast genome of land plants. Mol Biol Evol. 23:2175-2190.
    • (2006) Mol Biol Evol. , vol.23 , pp. 2175-2190
    • Chumley, T.W.1    Palmer, J.D.2    Mower, J.P.3    Fourcade, H.M.4    Calie, P.J.5    Boorejl Jansen, R.K.6
  • 12
    • 11144234440 scopus 로고    scopus 로고
    • Sequence and comparative analysis of the maize NB mitochondrial genome
    • Clifton SW, Minx P, Fauron CMR, et al. (13 co-authors). 2004. Sequence and comparative analysis of the maize NB mitochondrial genome. Plant Physiol. 136:3486-3503.
    • (2004) Plant Physiol. , vol.136 , pp. 3486-3503
    • Clifton, S.W.1    Minx, P.2    Fauron, C.M.R.3
  • 13
    • 0025358097 scopus 로고
    • The complete DNA sequence of the mitochondrial genome of Podospora anserina
    • Cummings DJ, McNally KL, Domenico JM, Matsuura ET. 1990. The complete DNA sequence of the mitochondrial genome of Podospora anserina. Curr Genet. 17:375-402.
    • (1990) Curr Genet. , vol.17 , pp. 375-402
    • Cummings, D.J.1    McNally, K.L.2    Domenico, J.M.3    Matsuura, E.T.4
  • 14
    • 0040635946 scopus 로고    scopus 로고
    • Editing and import: Strategies for providing plant mitochondria with a complete set of functional transfer RNAs
    • Dietrich A, Small I, Cosset A, Weil JH, Marechal-Drouard L 1996. Editing and import: strategies for providing plant mitochondria with a complete set of functional transfer RNAs. Biochimie 78:518-529.
    • (1996) Biochimie , vol.78 , pp. 518-529
    • Dietrich, A.1    Small, I.2    Cosset, A.3    Weil, J.H.4    Marechal-Drouard, L.5
  • 15
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32: 1792-1797.
    • (2004) Nucleic Acids Res. , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 16
    • 34547128656 scopus 로고    scopus 로고
    • Mapping of mitochondrial mRNA termini in Arabidopsis thaliana: T-elements contribute to 5' and 3' end formation
    • Forner J, Weber B, Thuss S, Wildum S, Binder S. 2007. Mapping of mitochondrial mRNA termini in Arabidopsis thaliana: t-elements contribute to 5' and 3' end formation. Nucleic Acids Res. 35:3676-3692.
    • (2007) Nucleic Acids Res. , vol.35 , pp. 3676-3692
    • Forner, J.1    Weber, B.2    Thuss, S.3    Wildum, S.4    Binder, S.5
  • 17
    • 0033592907 scopus 로고    scopus 로고
    • RNA editing in Arabidopsis mitochondria effects 441 C to U changes in ORFs
    • Giege P, Brennicke A. 1999. RNA editing in Arabidopsis mitochondria effects 441 C to U changes in ORFs. Proc Natl Acad Sci USA. 96:15324-15329.
    • (1999) Proc Natl Acad Sci USA. , vol.96 , pp. 15324-15329
    • Giege, P.1    Brennicke, A.2
  • 18
    • 0031782922 scopus 로고    scopus 로고
    • Complex II subunit 4 (sdh4) homologous sequences in plant mitochondrial genomes
    • Giege P, Knoop V, Brennicke A. 1998. Complex II subunit 4 (sdh4) homologous sequences in plant mitochondrial genomes. Curr Genet. 34:313-317.
    • (1998) Curr Genet. , vol.34 , pp. 313-317
    • Giege, P.1    Knoop, V.2    Brennicke, A.3
  • 19
    • 0031955116 scopus 로고    scopus 로고
    • Consed: A graphical tool for sequence finishing
    • Gordon D, Abajian C, Green P. 1998. Consed: a graphical tool for sequence finishing. Genome Res. 8:195-202.
    • (1998) Genome Res. , vol.8 , pp. 195-202
    • Gordon, D.1    Abajian, C.2    Green, P.3
  • 20
    • 57749192264 scopus 로고    scopus 로고
    • Mitochondrial DNA of Vitis vinifera and the issue of rampant horizontal gene transfer
    • Goremykin VV, Salamini F, Velasco R Viola R. 2009. Mitochondrial DNA of Vitis vinifera and the issue of rampant horizontal gene transfer. Mol Biol Evol. 26:99-110.
    • (2009) Mol Biol Evol. , vol.26 , pp. 99-110
    • Goremykin, V.V.1    Salamini, F.2    Velasco Viola R, R.3
  • 21
    • 69849093397 scopus 로고    scopus 로고
    • A trans-splicing group i intron and tRNA-hyperediting in the mitochondrial genome of the lycophyte Isoetes engelmannii
    • Grewe F, Viehoever P, Weisshaar B, Knoop V. 2009. A trans-splicing group I intron and tRNA-hyperediting in the mitochondrial genome of the lycophyte Isoetes engelmannii. Nucleic Acids Res. 37:5093-5104.
    • (2009) Nucleic Acids Res. , vol.37 , pp. 5093-5104
    • Grewe, F.1    Viehoever, P.2    Weisshaar, B.3    Knoop, V.4
  • 22
    • 0344442430 scopus 로고    scopus 로고
    • The complete nucleotide sequence and RNA editing content of the mitochondrial genome of rapeseed (Brassica napus L): Comparative analysis of the mitochondrial genomes of rapeseed and Arabidopsis thaliana
    • Handa H. 2003. The complete nucleotide sequence and RNA editing content of the mitochondrial genome of rapeseed (Brassica napus L): comparative analysis of the mitochondrial genomes of rapeseed and Arabidopsis thaliana. Nucleic Acids Res. 31:5907-5916.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 5907-5916
    • Handa, H.1
  • 24
    • 43049159700 scopus 로고    scopus 로고
    • Repeated big bangs and the expanding universe: Directionality in plant genome size evolution
    • Hawkins JS, Grover CE, Wendel JF. 2008. Repeated big bangs and the expanding universe: directionality in plant genome size evolution. Plant Sci. 174:557-562.
    • (2008) Plant Sci. , vol.174 , pp. 557-562
    • Hawkins, J.S.1    Grover, C.E.2    Wendel, J.F.3
  • 26
    • 0033004412 scopus 로고    scopus 로고
    • Cotran-scription of the rpl5-rps14-cob gene cluster in pea mitochondria
    • Hoffmann M, Dombrowski S, Guha C, Binder S. 1999. Cotran-scription of the rpl5-rps14-cob gene cluster in pea mitochondria. Mol Gen Genet. 261:537-545.
    • (1999) Mol Gen Genet. , vol.261 , pp. 537-545
    • Hoffmann, M.1    Dombrowski, S.2    Guha, C.3    Binder, S.4
  • 27
    • 0024749017 scopus 로고
    • Physical characterization of the mitochondrial DNA from cotton
    • Hsu CL, Mullin BC. 1989. Physical characterization of the mitochondrial DNA from cotton. Plant Mol Biol. 13:467-468.
    • (1989) Plant Mol Biol. , vol.13 , pp. 467-468
    • Hsu, C.L.1    Mullin, B.C.2
  • 28
    • 0032849859 scopus 로고    scopus 로고
    • CAP3: A DNA sequence assembly program
    • Huang X, Madan A. 1999. CAP3: a DNA sequence assembly program. Genome Res. 9:868-877.
    • (1999) Genome Res. , vol.9 , pp. 868-877
    • Huang, X.1    Madan, A.2
  • 29
    • 0034284437 scopus 로고    scopus 로고
    • Repbase update: A database and an electronic journal of repetitive elements.
    • Jurka J. 2000. Repbase update: a database and an electronic journal of repetitive elements. Trends Genet. 16:418-420.
    • (2000) Trends Genet. , vol.16 , pp. 418-420
    • Jurka, J.1
  • 30
    • 12044255284 scopus 로고
    • Linking phylogeny and genetics: Zea mays as a tool for phylogenetic studies
    • Kellogg EA, Birchler JA. 1993. Linking phylogeny and genetics: Zea mays as a tool for phylogenetic studies. Syst Biol. 42:415-439.
    • (1993) Syst Biol. , vol.42 , pp. 415-439
    • Kellogg, E.A.1    Birchler, J.A.2
  • 32
    • 4744343662 scopus 로고    scopus 로고
    • The mitochondrial DNA of land plants: Peculiarities in phylogenetic perspective
    • Knoop V. 2004. The mitochondrial DNA of land plants: peculiarities in phylogenetic perspective. Curr Genet. 46:123-139.
    • (2004) Curr Genet. , vol.46 , pp. 123-139
    • Knoop, V.1
  • 33
    • 0029670967 scopus 로고    scopus 로고
    • Copia-, gypsy-and LINE-like retrotransposon fragments in the mitochondrial genome of Arabidopsis thaliana
    • Knoop V, Unseld M, Marienfeld J, Brandt P, Sunkel S, Ullrich H, Brennicke A. 1996. copia-, gypsy-and LINE-like retrotransposon fragments in the mitochondrial genome of Arabidopsis thaliana. Genetics 142:579-585.
    • (1996) Genetics , vol.142 , pp. 579-585
    • Knoop, V.1    Unseld, M.2    Marienfeld, J.3    Brandt, P.4    Sunkel, S.5    Ullrich, H.6    Brennicke, A.7
  • 34
    • 0015366369 scopus 로고
    • Physicochemical characterization of mitochondrial DNA from pea leaves
    • Kolodner R, Tewari KK. 1972. Physicochemical characterization of mitochondrial DNA from pea leaves. Proc Natl Acad Sci USA. 69:1830-1834.
    • (1972) Proc Natl Acad Sci USA. , vol.69 , pp. 1830-1834
    • Kolodner, R.1    Tewari, K.K.2
  • 35
    • 33845679903 scopus 로고    scopus 로고
    • Organization and variation of angiosperm mitochondrial genome
    • Kubo T, Mikami T. 2007. Organization and variation of angiosperm mitochondrial genome. Physiol Plant. 129:6-13.
    • (2007) Physiol Plant. , vol.129 , pp. 6-13
    • Kubo, T.1    Mikami, T.2
  • 36
    • 37249058160 scopus 로고    scopus 로고
    • Angiosperm mitochondrial genomes and mutations
    • Kubo T, Newton KJ. 2008. Angiosperm mitochondrial genomes and mutations. Mitochondrion 8:5-14.
    • (2008) Mitochondrion , vol.8 , pp. 5-14
    • Kubo, T.1    Newton, K.J.2
  • 37
    • 67349286953 scopus 로고    scopus 로고
    • The complete mitochondrial genome sequence of the hornwort Megaceros aenigmaticus shows a mixed mode of conservative yet dynamic evolution in early land plant mitochondrial genomes
    • Li LB, Wang B, Liu Y, Qiu YL. 2009. The complete mitochondrial genome sequence of the hornwort Megaceros aenigmaticus shows a mixed mode of conservative yet dynamic evolution in early land plant mitochondrial genomes. J Mol Evol. 68:665-678.
    • (2009) J Mol Evol. , vol.68 , pp. 665-678
    • Li, L.B.1    Wang, B.2    Liu, Y.3    Qiu, Y.L.4
  • 38
    • 0034815350 scopus 로고    scopus 로고
    • Small, repetitive DNAs contribute significantly to the expanded mitochondrial genome of cucumber
    • Lilly JW, Havey MJ. 2001. Small, repetitive DNAs contribute significantly to the expanded mitochondrial genome of cucumber. Genetics 159:317-328.
    • (2001) Genetics , vol.159 , pp. 317-328
    • Lilly, J.W.1    Havey, M.J.2
  • 39
    • 36048989002 scopus 로고    scopus 로고
    • OrganellarGenomeDRAW (OGDRAW): A tool for the easy generation of high-quality custom graphical maps of plastid and mitochondrial genomes
    • Lohse M, Drechsel O, Bock R. 2007. OrganellarGenomeDRAW (OGDRAW): a tool for the easy generation of high-quality custom graphical maps of plastid and mitochondrial genomes. Curr Genet. 52:267-274.
    • (2007) Curr Genet. , vol.52 , pp. 267-274
    • Lohse, M.1    Drechsel, O.2    Bock, R.3
  • 41
    • 0030854739 scopus 로고    scopus 로고
    • TRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence
    • Lowe TM, Eddy SR. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25:955-964.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 955-964
    • Lowe, T.M.1    Eddy, S.R.2
  • 42
    • 30744475434 scopus 로고    scopus 로고
    • The origins of eukaryotic gene structure
    • Lynch M. 2006. The origins of eukaryotic gene structure. Mol Biol Evol. 23:450-468.
    • (2006) Mol Biol Evol. , vol.23 , pp. 450-468
    • Lynch, M.1
  • 43
    • 77952840306 scopus 로고    scopus 로고
    • Testing genome complexity\response
    • Lynch M, Conery JS. 2004. Testing genome complexity\response. Science 304:390.
    • (2004) Science , vol.304 , pp. 390
    • Lynch, M.1    Conery, J.S.2
  • 44
    • 33645214213 scopus 로고    scopus 로고
    • Mutation pressure and the evolution of organelle genomic architecture
    • Lynch M, Koskella B, Schaack S. 2006. Mutation pressure and the evolution of organelle genomic architecture. Science 311: 1727-1730.
    • (2006) Science , vol.311 , pp. 1727-1730
    • Lynch, M.1    Koskella, B.2    Schaack, S.3
  • 47
    • 0037040394 scopus 로고    scopus 로고
    • Microbial minimalism: Genome reduction in bacterial pathogens
    • Moran NA. 2002. Microbial minimalism: genome reduction in bacterial pathogens. Cell 108:583-586.
    • (2002) Cell , vol.108 , pp. 583-586
    • Moran, N.A.1
  • 48
    • 67849095411 scopus 로고    scopus 로고
    • The PREP suite: Predictive RNA editors for plant mitochondrial genes, chloroplast genes and user-defined alignments
    • Mower JP. 2009. The PREP suite: predictive RNA editors for plant mitochondrial genes, chloroplast genes and user-defined alignments. Nucleic Acids Res. 37:W253-W259.
    • (2009) Nucleic Acids Res. , vol.37
    • Mower, J.P.1
  • 49
    • 33747613063 scopus 로고    scopus 로고
    • Patterns of partial RNA editing in mitochondrial genes of Beta vulgaris
    • Mower JP, Palmer JD. 2006. Patterns of partial RNA editing in mitochondrial genes of Beta vulgaris. Mol Genet Genomics. 276:285-293.
    • (2006) Mol Genet Genomics. , vol.276 , pp. 285-293
    • Mower, J.P.1    Palmer, J.D.2
  • 50
    • 34548568981 scopus 로고    scopus 로고
    • Extensive variation in synonymous substitution rates in mitochondrial genes of seed plants
    • Mower JP, Touzet P, Gummow JS, Delph LF, Palmer JD. 2007. Extensive variation in synonymous substitution rates in mitochondrial genes of seed plants. BMC Evol Biol. 7:135.
    • (2007) BMC Evol Biol. , vol.7 , pp. 135
    • Mower, J.P.1    Touzet, P.2    Gummow, J.S.3    Delph, L.F.4    Palmer, J.D.5
  • 51
    • 35748939098 scopus 로고    scopus 로고
    • Computational analysis of RNA editing sites in plant mitochondrial genomes reveals similar information content and a sporadic distribution of editing sites
    • Mulligan RM, Chang KL, Chou CC. 2007. Computational analysis of RNA editing sites in plant mitochondrial genomes reveals similar information content and a sporadic distribution of editing sites. Mol Biol Evol. 24:1971-1981.
    • (2007) Mol Biol Evol. , vol.24 , pp. 1971-1981
    • Mulligan, R.M.1    Chang, K.L.2    Chou, C.C.3
  • 52
    • 34147178397 scopus 로고    scopus 로고
    • High-throughput RFLP genotyping method for large genomes based on a chemiluminescent detection system
    • Nakazato T, Gastony GJ. 2006. High-throughput RFLP genotyping method for large genomes based on a chemiluminescent detection system. Plant Mol Biol Rep. 24:245a-245f.
    • (2006) Plant Mol Biol Rep. , vol.24
    • Nakazato, T.1    Gastony, G.J.2
  • 53
    • 0031895184 scopus 로고    scopus 로고
    • Contrasting mitochondrial genome organizations and sequence affiliations among green algae: Potential factors, mechanisms, and evolutionary scenarios
    • Nedelcu AM. 1998. Contrasting mitochondrial genome organizations and sequence affiliations among green algae: potential factors, mechanisms, and evolutionary scenarios. J Phycol. 34:16-28.
    • (1998) J Phycol. , vol.34 , pp. 16-28
    • Nedelcu, A.M.1
  • 54
    • 0036456491 scopus 로고    scopus 로고
    • The complete sequence of the rice (Oryza sativa L.) mitochondrial genome: Frequent DNA sequence acquisition and loss during the evolution of flowering plants
    • Notsu Y, Masood S, Nishikawa T, Kubo N, Akiduki G, Nakazono M, Hirai A, Kadowaki K. 2002. The complete sequence of the rice (Oryza sativa L.) mitochondrial genome: frequent DNA sequence acquisition and loss during the evolution of flowering plants. Mol Genet Genomics. 268:434-445.
    • (2002) Mol Genet Genomics. , vol.268 , pp. 434-445
    • Notsu, Y.1    Masood, S.2    Nishikawa, T.3    Kubo, N.4    Akiduki, G.5    Nakazono, M.6    Hirai, A.7    Kadowaki, K.8
  • 55
    • 42049092254 scopus 로고    scopus 로고
    • Chromatophore genome sequence of Paulinella sheds light on acquisition of photosynthesis by eukaryotes
    • Nowack ECM, Melkonian M, Glockner G. 2008. Chromatophore genome sequence of Paulinella sheds light on acquisition of photosynthesis by eukaryotes. Curr Biol. 18:410-418.
    • (2008) Curr Biol. , vol.18 , pp. 410-418
    • Nowack, E.C.M.1    Melkonian, M.2    Glockner, G.3
  • 56
    • 0020480195 scopus 로고
    • Physical and gene mapping of chloroplast DNA from Atriplex triangularis and Cucumis sativa
    • Palmer JD. 1982. Physical and gene mapping of chloroplast DNA from Atriplex triangularis and Cucumis sativa. Nucleic Acids Res. 10:1593-1605.
    • (1982) Nucleic Acids Res. , vol.10 , pp. 1593-1605
    • Palmer, J.D.1
  • 57
    • 0025249858 scopus 로고
    • Contrasting modes and tempos of genome evolution in land plant organelles
    • Palmer JD. 1990. Contrasting modes and tempos of genome evolution in land plant organelles. Trends Genet. 6:115-120.
    • (1990) Trends Genet. , vol.6 , pp. 115-120
    • Palmer, J.D.1
  • 58
    • 0024259002 scopus 로고
    • Plant mitochondrial DNA evolves rapidly in structure, but slowly in sequence
    • Palmer JD, Herbon LA. 1989. Plant mitochondrial DNA evolves rapidly in structure, but slowly in sequence. J Mol Evol. 28:87-97.
    • (1989) J Mol Evol. , vol.28 , pp. 87-97
    • Palmer, J.D.1    Herbon, L.A.2
  • 59
    • 0029893142 scopus 로고    scopus 로고
    • Conservation of the organization of the mitochondrial nad3 and rps12 genes in evolutionarily distant angiosperms
    • Perrotta G, Regina TMR, Ceci LR, Quagliariello C. 1996. Conservation of the organization of the mitochondrial nad3 and rps12 genes in evolutionarily distant angiosperms. Mol Gen Genet. 251:326-337.
    • (1996) Mol Gen Genet. , vol.251 , pp. 326-337
    • Perrotta, G.1    Regina, T.M.R.2    Ceci, L.R.3    Quagliariello, C.4
  • 60
    • 33748955739 scopus 로고    scopus 로고
    • Comparison of promoters controlling on the sunflower mitochondrial genome the transcription of two copies of the same native trnK gene reveals some differences in their structure
    • Placido A, Damiano F, Sciancalepore M, De Benedetto C, Rainaldi G, Gallerani R. 2006. Comparison of promoters controlling on the sunflower mitochondrial genome the transcription of two copies of the same native trnK gene reveals some differences in their structure. Biochim Biophys Acta. 1757:1207-1216.
    • (2006) Biochim Biophys Acta. , vol.1757 , pp. 1207-1216
    • Placido, A.1    Damiano, F.2    Sciancalepore, M.3    De Benedetto, C.4    Rainaldi, G.5    Gallerani, R.6
  • 61
    • 0017369983 scopus 로고
    • Heterogeneous population of mitochon-drial DNA molecules in higher plants
    • Quetier F, Vedel F. 1977. Heterogeneous population of mitochon-drial DNA molecules in higher plants. Nature 268:365-368.
    • (1977) Nature , vol.268 , pp. 365-368
    • Quetier, F.1    Vedel, F.2
  • 62
    • 0030197641 scopus 로고    scopus 로고
    • The rpl5-rps14-cob gene arrangement in Solanum tuberosum: Rps14 is a transcribed and unedited pseudogene
    • Quiñones V, Zanlungo S, Moenne A, Gomez I, Holuigue L, Litvak S, Jordana X. 1996. The rpl5-rps14-cob gene arrangement in Solanum tuberosum: rps14 is a transcribed and unedited pseudogene. Plant Mol Biol. 31:937-943.
    • (1996) Plant Mol Biol. , vol.31 , pp. 937-943
    • Quiñones, V.1    Zanlungo, S.2    Moenne, A.3    Gomez, I.4    Holuigue, L.5    Litvak, S.6    Jordana, X.7
  • 64
    • 67149146195 scopus 로고    scopus 로고
    • An integrated genetic and cytogenetic map of the cucumber genome.
    • Ren Y, Zhang Z, Liu J, et al. (16 co-authors). 2009. An integrated genetic and cytogenetic map of the cucumber genome. PLoS ONE. 4:e5795.
    • (2009) PLoS ONE. , vol.4
    • Ren, Y.1    Zhang, Z.2    Liu, J.3
  • 65
    • 33845904639 scopus 로고    scopus 로고
    • Horizontal gene transfer in plants
    • Richardson AO, Palmer JD. 2007. Horizontal gene transfer in plants. J Exp Bot. 58:1-9.
    • (2007) J Exp Bot. , vol.58 , pp. 1-9
    • Richardson, A.O.1    Palmer, J.D.2
  • 66
    • 0031215039 scopus 로고    scopus 로고
    • An unusual mitochondrial atp9-rpl16 cotranscript found in the maternal distorted leaf mutant of Arabidopsis thaliana: Implication of GUG as an initiation codon in plant mitochondria
    • Sakamoto W, Tan SH, Murata M, Motoyoshi F. 1997. An unusual mitochondrial atp9-rpl16 cotranscript found in the maternal distorted leaf mutant of Arabidopsis thaliana: implication of GUG as an initiation codon in plant mitochondria. Plant Cell Physiol. 38:975-979.
    • (1997) Plant Cell Physiol. , vol.38 , pp. 975-979
    • Sakamoto, W.1    Tan, S.H.2    Murata, M.3    Motoyoshi, F.4
  • 67
    • 47649085332 scopus 로고    scopus 로고
    • Frequent, phylogenetically local horizontal transfer of the cox1 group i intron in flowering plant mitochondria
    • Sanchez-Puerta MV, Cho Y, Mower JP, Alverson AJ, Palmer JD. 2008. Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria. Mol Biol Evol. 25:1762-1777.
    • (2008) Mol Biol Evol. , vol.25 , pp. 1762-1777
    • Sanchez-Puerta, M.V.1    Cho, Y.2    Mower, J.P.3    Alverson, A.J.4    Palmer, J.D.5
  • 68
    • 33745809847 scopus 로고    scopus 로고
    • The Owen mitochondrial genome in sugar beet (Beta vulgaris L.): Possible mechanisms of extensive rearrangements and the origin of the mitotype-unique regions
    • Satoh M, Kubo T, Mikami T. 2006. The Owen mitochondrial genome in sugar beet (Beta vulgaris L.): possible mechanisms of extensive rearrangements and the origin of the mitotype-unique regions. Theor Appl Genet. 113:477-484.
    • (2006) Theor Appl Genet. , vol.113 , pp. 477-484
    • Satoh, M.1    Kubo, T.2    Mikami, T.3
  • 69
    • 8644286140 scopus 로고    scopus 로고
    • The cytoplasmic male-sterile type and normal type mitochon-drial genomes of sugar beet share the same complement of genes of known function but differ in the content of expressed ORFs
    • Satoh M, Kubo T, Nishizawa S, Estiati A, Itchoda N, Mikami T. 2004. The cytoplasmic male-sterile type and normal type mitochon-drial genomes of sugar beet share the same complement of genes of known function but differ in the content of expressed ORFs. Mol Genet Genomics. 272:247-256.
    • (2004) Mol Genet Genomics. , vol.272 , pp. 247-256
    • Satoh, M.1    Kubo, T.2    Nishizawa, S.3    Estiati, A.4    Itchoda, N.5    Mikami, T.6
  • 70
    • 63849264446 scopus 로고    scopus 로고
    • Gourds afloat: A dated phylogeny reveals an Asian origin of the gourd family (Cucurbitaceae) and numerous oversea dispersal events
    • Schaefer H, Heibl C, Renner SS. 2009. Gourds afloat: a dated phylogeny reveals an Asian origin of the gourd family (Cucurbitaceae) and numerous oversea dispersal events. Proc Biol Sci. 276:843-851.
    • (2009) Proc Biol Sci. , vol.276 , pp. 843-851
    • Schaefer, H.1    Heibl, C.2    Renner, S.S.3
  • 71
    • 44849098142 scopus 로고    scopus 로고
    • Nucleotide diversity in the mitochondrial and nuclear compartments of Chlamydomonas reinhardtii: Investigating the origins of genome architecture
    • Smith DR, Lee RW. 2008. Nucleotide diversity in the mitochondrial and nuclear compartments of Chlamydomonas reinhardtii: investigating the origins of genome architecture. BMC Evol Biol. 8:156.
    • (2008) BMC Evol Biol. , vol.8 , pp. 156
    • Smith, D.R.1    Lee, R.W.2
  • 72
    • 67649519425 scopus 로고    scopus 로고
    • Nucleotide diversity of the Chlamydo-monas reinhardtii plastid genome: Addressing the mutational-hazard hypothesis
    • Smith DR, Lee RW. 2009a. Nucleotide diversity of the Chlamydo-monas reinhardtii plastid genome: addressing the mutational-hazard hypothesis. BMC Evol Biol. 9:120.
    • (2009) BMC Evol Biol. , vol.9 , pp. 120
    • Smith, D.R.1    Lee, R.W.2
  • 73
    • 65249087231 scopus 로고    scopus 로고
    • The mitochondrial and plastid genomes of Volvox carteri: Bloated molecules rich in repetitive DNA
    • Smith DR, Lee RW. 2009b. The mitochondrial and plastid genomes of Volvox carteri: bloated molecules rich in repetitive DNA. BMC Genomics. 10:14.
    • (2009) BMC Genomics. , vol.10 , pp. 14
    • Smith, D.R.1    Lee, R.W.2
  • 75
    • 0019984101 scopus 로고
    • Mitochondrial and chloroplast genomes of maize have a 12-kilobase DNA sequence in common
    • Stern DB, Lonsdale DM. 1982. Mitochondrial and chloroplast genomes of maize have a 12-kilobase DNA sequence in common. Nature 299:698-702.
    • (1982) Nature , vol.299 , pp. 698-702
    • Stern, D.B.1    Lonsdale, D.M.2
  • 76
    • 0022163464 scopus 로고
    • Mitochondrial gene expression in Cucurbitaceae: Conserved and variable features
    • Stern DB, Newton KJ. 1985. Mitochondrial gene expression in Cucurbitaceae: conserved and variable features. Curr Genet. 9:395-405.
    • (1985) Curr Genet. , vol.9 , pp. 395-405
    • Stern, D.B.1    Newton, K.J.2
  • 79
    • 0031021278 scopus 로고    scopus 로고
    • The mitochondrial genome of Arabidopsis thaliana contains 57 genes in 366,924 nucleotides
    • Unseld M, Marienfeld JR, Brandt P, Brennicke A. 1997. The mitochondrial genome of Arabidopsis thaliana contains 57 genes in 366,924 nucleotides. Nat Genet. 15:57-61.
    • (1997) Nat Genet. , vol.15 , pp. 57-61
    • Unseld, M.1    Marienfeld, J.R.2    Brandt, P.3    Brennicke, A.4
  • 80
    • 1942520266 scopus 로고    scopus 로고
    • Testing genome complexity
    • Vinogradov AE. 2004. Testing genome complexity. Science 304: 389-390.
    • (2004) Science , vol.304 , pp. 389-390
    • Vinogradov, A.E.1
  • 81
    • 0019441235 scopus 로고
    • The size of the mitochondrial genome is large and variable in a family of plants (Cucurbita-ceae)
    • Ward B, Anderson R, Bendich A. 1981. The size of the mitochondrial genome is large and variable in a family of plants (Cucurbita-ceae). Cell 25:793-803.
    • (1981) Cell , vol.25 , pp. 793-803
    • Ward, B.1    Anderson, R.2    Bendich, A.3
  • 82
    • 0023462635 scopus 로고
    • Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs
    • Wolfe KH, Li WH, Sharp PM. 1987. Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs. Proc Natl Acad Sci USA. 84:9054-9058.
    • (1987) Proc Natl Acad Sci USA. , vol.84 , pp. 9054-9058
    • Wolfe, K.H.1    Li, W.H.2    Sharp, P.M.3
  • 83
    • 10244240599 scopus 로고    scopus 로고
    • Automatic annotation of organellar genomes with DOGMA
    • Wyman SK, Jansen RK, Boore JL. 2004. Automatic annotation of organellar genomes with DOGMA. Bioinformatics 20: 3252-3255.
    • (2004) Bioinformatics , vol.20 , pp. 3252-3255
    • Wyman, S.K.1    Jansen, R.K.2    Boore, J.L.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.