-
1
-
-
0028121106
-
Translation initiation factor IF1 is essential for cell viability in Escherichia coli
-
Cummings HS Hershey JW (1994) Translation initiation factor IF1 is essential for cell viability in Escherichia coli. J Bacteriol 176, 198 205.
-
(1994)
J Bacteriol
, vol.176
, pp. 198-205
-
-
Cummings, H.S.1
Hershey, J.W.2
-
2
-
-
0842265778
-
Generation and characterization of functional mutants in the translation initiation factor IF1 of Escherichia coli
-
Croitoru V, Bucheli-Witschel M, Hagg P, Abdulkarim F Isaksson LA (2004) Generation and characterization of functional mutants in the translation initiation factor IF1 of Escherichia coli. Eur J Biochem/FEBS 271, 534 544.
-
(2004)
Eur J Biochem/FEBS
, vol.271
, pp. 534-544
-
-
Croitoru, V.1
Bucheli-Witschel, M.2
Hagg, P.3
Abdulkarim, F.4
Isaksson, L.A.5
-
3
-
-
33745943856
-
How initiation factors maximize the accuracy of tRNA selection in initiation of bacterial protein synthesis
-
Antoun A, Pavlov MY, Lovmar M Ehrenberg M (2006a) How initiation factors maximize the accuracy of tRNA selection in initiation of bacterial protein synthesis. Mol Cell 23, 183 193.
-
(2006)
Mol Cell
, vol.23
, pp. 183-193
-
-
Antoun, A.1
Pavlov, M.Y.2
Lovmar, M.3
Ehrenberg, M.4
-
4
-
-
0031915895
-
Universally conserved translation initiation factors
-
Kyrpides NC Woese CR (1998) Universally conserved translation initiation factors. Proc Natl Acad Sci USA 95, 224 228.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 224-228
-
-
Kyrpides, N.C.1
Woese, C.R.2
-
5
-
-
0037956259
-
Remarkable conservation of translation initiation factors: IF1/eIF1A and IF2/eIF5B are universally distributed phylogenetic markers
-
Sorensen HP, Hedegaard J, Sperling-Petersen HU Mortensen KK (2001) Remarkable conservation of translation initiation factors: IF1/eIF1A and IF2/eIF5B are universally distributed phylogenetic markers. IUBMB Life 51, 321 327.
-
(2001)
IUBMB Life
, vol.51
, pp. 321-327
-
-
Sorensen, H.P.1
Hedegaard, J.2
Sperling-Petersen, H.U.3
Mortensen, K.K.4
-
6
-
-
0029051704
-
Specific protection of 16 S rRNA by translational initiation factors
-
Moazed D, Samaha RR, Gualerzi C Noller HF (1995) Specific protection of 16 S rRNA by translational initiation factors. J Mol Biol 248, 207 210.
-
(1995)
J Mol Biol
, vol.248
, pp. 207-210
-
-
Moazed, D.1
Samaha, R.R.2
Gualerzi, C.3
Noller, H.F.4
-
7
-
-
0034716948
-
Interaction of translation initiation factor IF1 with the E. coli ribosomal A site
-
Dahlquist KD Puglisi JD (2000) Interaction of translation initiation factor IF1 with the E. coli ribosomal A site. J Mol Biol 299, 1 15.
-
(2000)
J Mol Biol
, vol.299
, pp. 1-15
-
-
Dahlquist, K.D.1
Puglisi, J.D.2
-
8
-
-
0024217480
-
Interaction of Escherichia coli translation-initiation factor IF-1 with ribosomes
-
Celano B, Pawlik RT Gualerzi CO (1988) Interaction of Escherichia coli translation-initiation factor IF-1 with ribosomes. Eur J Biochem/FEBS 178, 351 355.
-
(1988)
Eur J Biochem/FEBS
, vol.178
, pp. 351-355
-
-
Celano, B.1
Pawlik, R.T.2
Gualerzi, C.O.3
-
10
-
-
33745763700
-
How initiation factors tune the rate of initiation of protein synthesis in bacteria
-
Antoun A, Pavlov MY, Lovmar M Ehrenberg M (2006b) How initiation factors tune the rate of initiation of protein synthesis in bacteria. EMBO J 25, 2539 2550.
-
(2006)
EMBO J
, vol.25
, pp. 2539-2550
-
-
Antoun, A.1
Pavlov, M.Y.2
Lovmar, M.3
Ehrenberg, M.4
-
11
-
-
0035910393
-
Crystal structure of an initiation factor bound to the 30S ribosomal subunit
-
Carter AP, Clemons WM Jr., Brodersen DE, Morgan-Warren RJ, Hartsch T, Wimberly BT Ramakrishnan V (2001) Crystal structure of an initiation factor bound to the 30S ribosomal subunit. Science 291, 498 501.
-
(2001)
Science
, vol.291
, pp. 498-501
-
-
Carter, A.P.1
Clemons Jr., W.M.2
Brodersen, D.E.3
Morgan-Warren, R.J.4
Hartsch, T.5
Wimberly, B.T.6
Ramakrishnan, V.7
-
12
-
-
0014419856
-
Binding of formylmethionyl-tRNA to 30S ribosomal sub-units
-
Mukundan MA, Hershey JW, Dewey KF Thach RE (1968) Binding of formylmethionyl-tRNA to 30S ribosomal sub-units. Nature 217, 1013 1016.
-
(1968)
Nature
, vol.217
, pp. 1013-1016
-
-
Mukundan, M.A.1
Hershey, J.W.2
Dewey, K.F.3
Thach, R.E.4
-
13
-
-
0015512669
-
The mechanism of action of initiation factor IF1: Non-analogy with elongation factor EFTs
-
Kay AC Grunberg-Manago M (1972) The mechanism of action of initiation factor IF1: non-analogy with elongation factor EFTs. Biochim Biophys Acta 277, 225 230.
-
(1972)
Biochim Biophys Acta
, vol.277
, pp. 225-230
-
-
Kay, A.C.1
Grunberg-Manago, M.2
-
14
-
-
0017346649
-
Function of initiation factor 1 in the binding and release of initiation factor 2 from ribosomal initiation complexes in Escherichia coli
-
Stringer EA, Sarkar P Maitra U (1977) Function of initiation factor 1 in the binding and release of initiation factor 2 from ribosomal initiation complexes in Escherichia coli. J Biol Chem 252, 1739 1744.
-
(1977)
J Biol Chem
, vol.252
, pp. 1739-1744
-
-
Stringer, E.A.1
Sarkar, P.2
Maitra, U.3
-
16
-
-
33645965566
-
Unfolding of mRNA secondary structure by the bacterial translation initiation complex
-
Studer SM Joseph S (2006) Unfolding of mRNA secondary structure by the bacterial translation initiation complex. Mol Cell 22, 105 115.
-
(2006)
Mol Cell
, vol.22
, pp. 105-115
-
-
Studer, S.M.1
Joseph, S.2
-
17
-
-
0032516787
-
Initiation factors IF1 and IF2 synergistically remove peptidyl-tRNAs with short polypeptides from the P-site of translating Escherichia coli ribosomes
-
Karimi R, Pavlov MY, Heurgue-Hamard V, Buckingham RH Ehrenberg M (1998) Initiation factors IF1 and IF2 synergistically remove peptidyl-tRNAs with short polypeptides from the P-site of translating Escherichia coli ribosomes. J Mol Biol 281, 241 252.
-
(1998)
J Mol Biol
, vol.281
, pp. 241-252
-
-
Karimi, R.1
Pavlov, M.Y.2
Heurgue-Hamard, V.3
Buckingham, R.H.4
Ehrenberg, M.5
-
18
-
-
0014502848
-
Polypeptide chain initiation in E. coli: Isolation of homogeneous initiation factor E2 and its relation to ribosomal proteins
-
Chae YB, Mazumder R Ochoa S (1969) Polypeptide chain initiation in E. coli: isolation of homogeneous initiation factor E2 and its relation to ribosomal proteins. Proc Natl Acad Sci USA 62, 1181 1188.
-
(1969)
Proc Natl Acad Sci USA
, vol.62
, pp. 1181-1188
-
-
Chae, Y.B.1
Mazumder, R.2
Ochoa, S.3
-
19
-
-
0031854151
-
Initiation factors of protein biosynthesis in bacteria and their structural relationship to elongation and termination factors
-
Brock S, Szkaradkiewicz K Sprinzl M (1998) Initiation factors of protein biosynthesis in bacteria and their structural relationship to elongation and termination factors. Mol Microbiol 29, 409 417.
-
(1998)
Mol Microbiol
, vol.29
, pp. 409-417
-
-
Brock, S.1
Szkaradkiewicz, K.2
Sprinzl, M.3
-
20
-
-
20444365142
-
The cryo-EM structure of a translation initiation complex from Escherichia coli
-
Allen GS, Zavialov A, Gursky R, Ehrenberg M Frank J (2005) The cryo-EM structure of a translation initiation complex from Escherichia coli. Cell 121, 703 712.
-
(2005)
Cell
, vol.121
, pp. 703-712
-
-
Allen, G.S.1
Zavialov, A.2
Gursky, R.3
Ehrenberg, M.4
Frank, J.5
-
21
-
-
0017847276
-
Binding of labeled initiation factor IF-1 to ribosomal particles and the relationship to the mode of IF-1 action in ribosome dissociation
-
van der Hofstad GA, Buitenhek A, van den Elsen PJ, Voorma HO Bosch L (1978) Binding of labeled initiation factor IF-1 to ribosomal particles and the relationship to the mode of IF-1 action in ribosome dissociation. Eur J Biochem/FEBS 89, 221 228.
-
(1978)
Eur J Biochem/FEBS
, vol.89
, pp. 221-228
-
-
Van Der Hofstad, G.A.1
Buitenhek, A.2
Van Den Elsen, P.J.3
Voorma, H.O.4
Bosch, L.5
-
22
-
-
0034904102
-
Cell-free translation reconstituted with purified components
-
Shimizu Y, Inoue A, Tomari Y, Suzuki T, Yokogawa T, Nishikawa K Ueda T (2001) Cell-free translation reconstituted with purified components. Nat Biotechnol 19, 751 755.
-
(2001)
Nat Biotechnol
, vol.19
, pp. 751-755
-
-
Shimizu, Y.1
Inoue, A.2
Tomari, Y.3
Suzuki, T.4
Yokogawa, T.5
Nishikawa, K.6
Ueda, T.7
-
23
-
-
0031002350
-
The structure of the translational initiation factor IF1 from E. coli contains an oligomer-binding motif
-
Sette M, van Tilborg P, Spurio R, Kaptein R, Paci M, Gualerzi CO Boelens R (1997) The structure of the translational initiation factor IF1 from E. coli contains an oligomer-binding motif. EMBO J 16, 1436 1443.
-
(1997)
EMBO J
, vol.16
, pp. 1436-1443
-
-
Sette, M.1
Van Tilborg, P.2
Spurio, R.3
Kaptein, R.4
Paci, M.5
Gualerzi, C.O.6
Boelens, R.7
-
24
-
-
0026730491
-
Translational initiation factors IF-1 and eIF-2 alpha share an RNA-binding motif with prokaryotic ribosomal protein S1 and polynucleotide phosphorylase
-
Gribskov M (1992) Translational initiation factors IF-1 and eIF-2 alpha share an RNA-binding motif with prokaryotic ribosomal protein S1 and polynucleotide phosphorylase. Gene 119, 107 111.
-
(1992)
Gene
, vol.119
, pp. 107-111
-
-
Gribskov, M.1
-
25
-
-
0019176596
-
A circular dichroism study of Escherichia coli initiation factor-1 binding to polynucleotides
-
Schleich T, Verwolf GL Twombly K (1980) A circular dichroism study of Escherichia coli initiation factor-1 binding to polynucleotides. Biochim Biophys Acta 609, 313 320. (Pubitemid 11245452) (Pubitemid 11245452)
-
(1980)
Biochimica et Biophysica Acta
, vol.609
, Issue.2
, pp. 313-320
-
-
Schleich, T.1
Verwolf, G.L.2
Twombly, K.3
-
26
-
-
33845341430
-
RNA chaperone activity of translation initiation factor IF1
-
Croitoru V, Semrad K, Prenninger S, Rajkowitsch L, Vejen M, Laursen BS, Sperling-Petersen HU Isaksson LA (2006) RNA chaperone activity of translation initiation factor IF1. Biochimie 88, 1875 1882.
-
(2006)
Biochimie
, vol.88
, pp. 1875-1882
-
-
Croitoru, V.1
Semrad, K.2
Prenninger, S.3
Rajkowitsch, L.4
Vejen, M.5
Laursen, B.S.6
Sperling-Petersen, H.U.7
Isaksson, L.A.8
-
27
-
-
34249809134
-
Transcription antitermination by translation initiation factor IF1
-
Phadtare S, Kazakov T, Bubunenko M, Court DL, Pestova T Severinov K (2007) Transcription antitermination by translation initiation factor IF1. J Bacteriol.
-
(2007)
J Bacteriol
-
-
Phadtare, S.1
Kazakov, T.2
Bubunenko, M.3
Court, D.L.4
Pestova, T.5
Severinov, K.6
-
28
-
-
30644465040
-
Differential promoter usage of infA in response to cold shock in Escherichia coli
-
Ko JH, Lee SJ, Cho B Lee Y (2006) Differential promoter usage of infA in response to cold shock in Escherichia coli. FEBS Lett 580, 539 544.
-
(2006)
FEBS Lett
, vol.580
, pp. 539-544
-
-
Ko, J.H.1
Lee, S.J.2
Cho, B.3
Lee, Y.4
-
29
-
-
34247470279
-
Cold-shock-induced de novo transcription and translation of infA and role of IF1 during cold adaptation
-
Giangrossi M, Brandi A, Giuliodori AM, Gualerzi CO Pon CL (2007) Cold-shock-induced de novo transcription and translation of infA and role of IF1 during cold adaptation. Mol Microbiol 64, 807 821.
-
(2007)
Mol Microbiol
, vol.64
, pp. 807-821
-
-
Giangrossi, M.1
Brandi, A.2
Giuliodori, A.M.3
Gualerzi, C.O.4
Pon, C.L.5
-
30
-
-
0035205430
-
Complementation of cold shock proteins by translation initiation factor IF1 in vivo
-
Weber MH, Beckering CL Marahiel MA (2001) Complementation of cold shock proteins by translation initiation factor IF1 in vivo. J Bacteriol 183, 7381 7386.
-
(2001)
J Bacteriol
, vol.183
, pp. 7381-7386
-
-
Weber, M.H.1
Beckering, C.L.2
Marahiel, M.A.3
-
32
-
-
33749527393
-
Structural analysis of kasugamycin inhibition of translation
-
Schuwirth BS, Day JM, Hau CW, Janssen GR, Dahlberg AE, Cate JH Vila-Sanjurjo A (2006) Structural analysis of kasugamycin inhibition of translation. Nature Struct Mol Biol 13, 879 886.
-
(2006)
Nature Struct Mol Biol
, vol.13
, pp. 879-886
-
-
Schuwirth, B.S.1
Day, J.M.2
Hau, C.W.3
Janssen, G.R.4
Dahlberg, A.E.5
Cate, J.H.6
Vila-Sanjurjo, A.7
-
33
-
-
33749531968
-
The antibiotic kasugamycin mimics mRNA nucleotides to destabilize tRNA binding and inhibit canonical translation initiation
-
Schluenzen F, Takemoto C, Wilson DN, Kaminishi T, Harms JM, Hanawa-Suetsugu K, Szaflarski W, Kawazoe M, Shirouzu M, Nierhaus KH et al. (2006) The antibiotic kasugamycin mimics mRNA nucleotides to destabilize tRNA binding and inhibit canonical translation initiation. Nat Struct Mol Biol 13, 871 878.
-
(2006)
Nat Struct Mol Biol
, vol.13
, pp. 871-878
-
-
Schluenzen, F.1
Takemoto, C.2
Wilson, D.N.3
Kaminishi, T.4
Harms, J.M.5
Hanawa-Suetsugu, K.6
Szaflarski, W.7
Kawazoe, M.8
Shirouzu, M.9
Nierhaus, K.H.10
-
34
-
-
0013956054
-
Mechanism of kasugamycin action on polypeptide synthesis
-
Tanaka N, Yamaguchi H Umezawa H (1966) Mechanism of kasugamycin action on polypeptide synthesis. J Biochem 60, 429 434.
-
(1966)
J Biochem
, vol.60
, pp. 429-434
-
-
Tanaka, N.1
Yamaguchi, H.2
Umezawa, H.3
-
35
-
-
33749537522
-
Antibiotic blocks mRNA path on the ribosome
-
Mankin A (2006) Antibiotic blocks mRNA path on the ribosome. Nat Struct Mol Biol 13, 858 860.
-
(2006)
Nat Struct Mol Biol
, vol.13
, pp. 858-860
-
-
Mankin, A.1
-
36
-
-
0015506129
-
Differential inhibition of coliphage MS2 protein synthesis by ribosome-directed antibiotics
-
Kozak M Nathans D (1972) Differential inhibition of coliphage MS2 protein synthesis by ribosome-directed antibiotics. J Mol Biol 70, 41 55.
-
(1972)
J Mol Biol
, vol.70
, pp. 41-55
-
-
Kozak, M.1
Nathans, D.2
-
37
-
-
0036035334
-
Differential inhibition of 30S and 70S translation initiation complexes on leaderless mRNA by kasugamycin
-
Moll I Blasi U (2002) Differential inhibition of 30S and 70S translation initiation complexes on leaderless mRNA by kasugamycin. Biochem Biophys Res Commun 297, 1021 1026.
-
(2002)
Biochem Biophys Res Commun
, vol.297
, pp. 1021-1026
-
-
Moll, I.1
Blasi, U.2
-
38
-
-
13844303732
-
In vivo involvement of mutated initiation factor IF1 in gene expression control at the translational level
-
Croitoru VV, Bucheli-Witschel M Isaksson LA (2005) In vivo involvement of mutated initiation factor IF1 in gene expression control at the translational level. FEBS Lett 579, 995 1000.
-
(2005)
FEBS Lett
, vol.579
, pp. 995-1000
-
-
Croitoru, V.V.1
Bucheli-Witschel, M.2
Isaksson, L.A.3
-
39
-
-
0031015217
-
CspA, the major cold-shock protein of Escherichia coli, is an RNA chaperone
-
Jiang W, Hou Y Inouye M (1997) CspA, the major cold-shock protein of Escherichia coli, is an RNA chaperone. J Biol Chem 272, 196 202.
-
(1997)
J Biol Chem
, vol.272
, pp. 196-202
-
-
Jiang, W.1
Hou, Y.2
Inouye, M.3
-
40
-
-
35348988706
-
Production and epitope characterization of mAbs specific for translation factor IF1
-
Rasmussen LC, Jensen JM, Croitoru V, Sperling-Petersen HU Mortensen KK (2007) Production and epitope characterization of mAbs specific for translation factor IF1. Biochem Biophys Res Commun 364, 72 78.
-
(2007)
Biochem Biophys Res Commun
, vol.364
, pp. 72-78
-
-
Rasmussen, L.C.1
Jensen, J.M.2
Croitoru, V.3
Sperling-Petersen, H.U.4
Mortensen, K.K.5
-
41
-
-
0035827918
-
Cooperative effects by the initiation codon and its flanking regions on translation initiation
-
Stenstrom CM, Holmgren E Isaksson LA (2001) Cooperative effects by the initiation codon and its flanking regions on translation initiation. Gene 273, 259 265.
-
(2001)
Gene
, vol.273
, pp. 259-265
-
-
Stenstrom, C.M.1
Holmgren, E.2
Isaksson, L.A.3
-
42
-
-
33645296046
-
Influences on gene expression in vivo by a Shine-Dalgarno sequence
-
Jin H, Zhao Q, Gonzalez de Valdivia EI, Ardell DH, Stenstrom M Isaksson LA (2006) Influences on gene expression in vivo by a Shine-Dalgarno sequence. Mol Microbiol 60, 480 492.
-
(2006)
Mol Microbiol
, vol.60
, pp. 480-492
-
-
Jin, H.1
Zhao, Q.2
Gonzalez De Valdivia, E.I.3
Ardell, D.H.4
Stenstrom, M.5
Isaksson, L.A.6
-
44
-
-
0035941484
-
Codon bias at the 3′-side of the initiation codon is correlated with translation initiation efficiency in Escherichia coli
-
Stenstrom CM, Jin H, Major LL, Tate WP Isaksson LA (2001) Codon bias at the 3′-side of the initiation codon is correlated with translation initiation efficiency in Escherichia coli. Gene 263, 273 284.
-
(2001)
Gene
, vol.263
, pp. 273-284
-
-
Stenstrom, C.M.1
Jin, H.2
Major, L.L.3
Tate, W.P.4
Isaksson, L.A.5
-
45
-
-
31544450286
-
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: The Keio collection
-
0008
-
Baba T, Ara T, Hasegawa M, Takai Y, Okumura Y, Baba M, Datsenko KA, Tomita M, Wanner BL Mori H (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol Syst Biol 2, 2006 0008.
-
(2006)
Mol Syst Biol
, vol.2
, pp. 2006
-
-
Baba, T.1
Ara, T.2
Hasegawa, M.3
Takai, Y.4
Okumura, Y.5
Baba, M.6
Datsenko, K.A.7
Tomita, M.8
Wanner, B.L.9
Mori, H.10
-
46
-
-
0025991729
-
Structure and expression of the infA operon encoding translational initiation factor IF1. Transcriptional control by growth rate
-
Cummings HS, Sands JF, Foreman PC, Fraser J Hershey JW (1991) Structure and expression of the infA operon encoding translational initiation factor IF1. Transcriptional control by growth rate. J Biol Chem 266, 16491 16498.
-
(1991)
J Biol Chem
, vol.266
, pp. 16491-16498
-
-
Cummings, H.S.1
Sands, J.F.2
Foreman, P.C.3
Fraser, J.4
Hershey, J.W.5
-
47
-
-
4444325711
-
A dedicated translation factor controls the synthesis of the global regulator Fis
-
Owens RM, Pritchard G, Skipp P, Hodey M, Connell SR, Nierhaus KH O'Connor CD (2004) A dedicated translation factor controls the synthesis of the global regulator Fis. EMBO J 23, 3375 3385.
-
(2004)
EMBO J
, vol.23
, pp. 3375-3385
-
-
Owens, R.M.1
Pritchard, G.2
Skipp, P.3
Hodey, M.4
Connell, S.R.5
Nierhaus, K.H.6
O'Connor, C.D.7
-
49
-
-
0032246224
-
The analysis of translational activity using a reporter gene constructed from repeats of an antibody-binding domain from protein A
-
Bjornsson A, Mottagui-Tabar S Isaksson LA (1998) The analysis of translational activity using a reporter gene constructed from repeats of an antibody-binding domain from protein A. Methods Mol Biol 77, 75 91.
-
(1998)
Methods Mol Biol
, vol.77
, pp. 75-91
-
-
Bjornsson, A.1
Mottagui-Tabar, S.2
Isaksson, L.A.3
-
50
-
-
0025952258
-
Codon choice and potential complementarity between mRNA downstream of the initiation codon and bases 1471-1480 in 16S ribosomal RNA affects expression of glnS
-
Faxen M, Plumbridge J Isaksson LA (1991) Codon choice and potential complementarity between mRNA downstream of the initiation codon and bases 1471-1480 in 16S ribosomal RNA affects expression of glnS. Nucleic Acids Res 19, 5247 5251.
-
(1991)
Nucleic Acids Res
, vol.19
, pp. 5247-5251
-
-
Faxen, M.1
Plumbridge, J.2
Isaksson, L.A.3
|