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Volumn 25, Issue 11, 2006, Pages 2539-2550

How initiation factors tune the rate of initiation of protein synthesis in bacteria

Author keywords

Initiation; Initiation factors; Initiator tRNA protein synthesis; Ribosome

Indexed keywords

INITIATION FACTOR 1; INITIATION FACTOR 2; INITIATION FACTOR 3; MESSENGER RNA; PROTEIN SUBUNIT; TRANSFER RNA;

EID: 33745763700     PISSN: 02614189     EISSN: 14602075     Source Type: Journal    
DOI: 10.1038/sj.emboj.7601140     Document Type: Article
Times cited : (117)

References (42)
  • 1
    • 20444365142 scopus 로고    scopus 로고
    • The cryo-EM structure of a translation initiation complex from Escherichia coli
    • Allen GS, Zavialov A, Gursky R, Ehrenberg M, Frank J (2005) The cryo-EM structure of a translation initiation complex from Escherichia coli. Cell 121: 703-712
    • (2005) Cell , vol.121 , pp. 703-712
    • Allen, G.S.1    Zavialov, A.2    Gursky, R.3    Ehrenberg, M.4    Frank, J.5
  • 2
    • 0142041880 scopus 로고    scopus 로고
    • The roles of initiation factor 2 and guanosine triphosphate in initiation of protein synthesis
    • Antoun A, Pavlov MY, Andersson K, Tenson T, Ehrenberg M (2003) The roles of initiation factor 2 and guanosine triphosphate in initiation of protein synthesis. EMBO J 22: 5593-5601
    • (2003) EMBO J , vol.22 , pp. 5593-5601
    • Antoun, A.1    Pavlov, M.Y.2    Andersson, K.3    Tenson, T.4    Ehrenberg, M.5
  • 3
    • 2342547059 scopus 로고    scopus 로고
    • Ribosome formation from subunits studied by stopped-flow and Rayleigh light scattering
    • Antoun A, Pavlov MY, Tenson T, Ehrenberg MM (2004) Ribosome formation from subunits studied by stopped-flow and Rayleigh light scattering. Biol Proc Online 6: 35-54
    • (2004) Biol Proc Online , vol.6 , pp. 35-54
    • Antoun, A.1    Pavlov, M.Y.2    Tenson, T.3    Ehrenberg, M.M.4
  • 4
    • 0015844887 scopus 로고
    • Sequence of events in initiation of protein synthesis
    • Benne R, Ebes F, Voorma HO (1973) Sequence of events in initiation of protein synthesis. Eur J Biochem 38: 265-273
    • (1973) Eur J Biochem , vol.38 , pp. 265-273
    • Benne, R.1    Ebes, F.2    Voorma, H.O.3
  • 5
    • 0023038109 scopus 로고
    • Mechanism of translational initiation in prokaryotes. Evidence for a direct effect of IF2 on the activity of the 30 S ribosomal subunit
    • Canonaco MA, Calogero RA, Gualerzi CO (1986) Mechanism of translational initiation in prokaryotes. Evidence for a direct effect of IF2 on the activity of the 30 S ribosomal subunit. FEBS Lett 207: 198-204
    • (1986) FEBS Lett , vol.207 , pp. 198-204
    • Canonaco, M.A.1    Calogero, R.A.2    Gualerzi, C.O.3
  • 6
    • 0019499826 scopus 로고
    • The effect of initiation factor IF-3 on Escherichia coli ribosomal subunit association kinetics
    • Chaires JB, Pande C, Wishnia A (1981) The effect of initiation factor IF-3 on Escherichia coli ribosomal subunit association kinetics. J Biol Chem 256: 6600-6607
    • (1981) J Biol Chem , vol.256 , pp. 6600-6607
    • Chaires, J.B.1    Pande, C.2    Wishnia, A.3
  • 7
    • 0842265778 scopus 로고    scopus 로고
    • Generation and characterization of functional mutants in the translation initiation factor IF1 of Escherichia coli
    • Croitoru V, Bucheli-Witschel M, Hagg P, Abdulkarim F, Isaksson LA (2004) Generation and characterization of functional mutants in the translation initiation factor IF1 of Escherichia coli. Eur J Biochem 271: 534-544
    • (2004) Eur J Biochem , vol.271 , pp. 534-544
    • Croitoru, V.1    Bucheli-Witschel, M.2    Hagg, P.3    Abdulkarim, F.4    Isaksson, L.A.5
  • 8
    • 0028121106 scopus 로고
    • Translation initiation factor IF1 is essential for cell viability in Escherichia coli
    • Cummings HS, Hershey JW (1994) Translation initiation factor IF1 is essential for cell viability in Escherichia coli. J Bacteriol 176: 198-205
    • (1994) J Bacteriol , vol.176 , pp. 198-205
    • Cummings, H.S.1    Hershey, J.W.2
  • 9
    • 0034759978 scopus 로고    scopus 로고
    • Interaction of translation initiation factor 3 with the 30S ribosomal subunit
    • Dallas A, Noller HF (2001) Interaction of translation initiation factor 3 with the 30S ribosomal subunit. Mol Cell 8: 855-864
    • (2001) Mol Cell , vol.8 , pp. 855-864
    • Dallas, A.1    Noller, H.F.2
  • 10
    • 0000332840 scopus 로고
    • Design and use of a fast and accurate in vitro translation system
    • Spedding G (ed), Oxford, UK: IRL Press at Oxford University Press
    • Ehrenberg M, Bilgin N, Kurland C (1990) Design and use of a fast and accurate in vitro translation system. In Ribosomes and Protein Synthesis. A Practical Approach, Spedding G (ed), pp 101-128. Oxford, UK: IRL Press at Oxford University Press
    • (1990) Ribosomes and Protein Synthesis. A Practical Approach , pp. 101-128
    • Ehrenberg, M.1    Bilgin, N.2    Kurland, C.3
  • 11
    • 0015838802 scopus 로고
    • The interaction of radioactive initiation factor IF-2 with ribosomes during initiation of protein synthesis
    • Fakunding JL, Hershey JW (1973) The interaction of radioactive initiation factor IF-2 with ribosomes during initiation of protein synthesis. J Biol Chem 248: 4206-4212
    • (1973) J Biol Chem , vol.248 , pp. 4206-4212
    • Fakunding, J.L.1    Hershey, J.W.2
  • 12
    • 0031721651 scopus 로고    scopus 로고
    • Effect of temperature on in vivo protein synthetic capacity in Escherichia coli
    • Farewell A, Neidhardt FC (1998) Effect of temperature on in vivo protein synthetic capacity in Escherichia coli. J Bacteriol 180: 4704-4710
    • (1998) J Bacteriol , vol.180 , pp. 4704-4710
    • Farewell, A.1    Neidhardt, F.C.2
  • 14
    • 0016800091 scopus 로고
    • Light-scattering studies showing the effect of initiation factors on the reversible dissociation of Escherichia coli ribosomes
    • Grunberg-Manago M, Dessen P, Pantaloni D, Godefroy-Colburn T, Wolfe AD, Dondon J (1975) Light-scattering studies showing the effect of initiation factors on the reversible dissociation of Escherichia coli ribosomes. J Mol Biol 94: 461-478
    • (1975) J Mol Biol , vol.94 , pp. 461-478
    • Grunberg-Manago, M.1    Dessen, P.2    Pantaloni, D.3    Godefroy-Colburn, T.4    Wolfe, A.D.5    Dondon, J.6
  • 15
    • 0017348792 scopus 로고
    • Initial rate kinetic analysis of the mechanism of initiation complex formation and the role of initiation factor IF-3
    • Gualerzi C, Risuleo G, Pon CL (1977) Initial rate kinetic analysis of the mechanism of initiation complex formation and the role of initiation factor IF-3. Biochemistry 16: 1684-1689
    • (1977) Biochemistry , vol.16 , pp. 1684-1689
    • Gualerzi, C.1    Risuleo, G.2    Pon, C.L.3
  • 16
    • 0018785962 scopus 로고
    • Mechanism of the spontaneous and initiation factor 3-induced dissociation of 30S.aminoacyl-tRNA.polynucleotide ternary complexes
    • Gualerzi C, Risuleo G, Pon PC (1979) Mechanism of the spontaneous and initiation factor 3-induced dissociation of 30S.aminoacyl-tRNA.polynucleotide ternary complexes. J Biol Chem 254: 44-49
    • (1979) J Biol Chem , vol.254 , pp. 44-49
    • Gualerzi, C.1    Risuleo, G.2    Pon, P.C.3
  • 17
    • 0025365804 scopus 로고
    • Initiation of mRNA translation in prokaryotes
    • Gualerzi CO, Pon CL (1990) Initiation of mRNA translation in prokaryotes. Biochemistry 29: 5881-5889
    • (1990) Biochemistry , vol.29 , pp. 5881-5889
    • Gualerzi, C.O.1    Pon, C.L.2
  • 18
    • 0024835265 scopus 로고
    • Selection of the initiator tRNA by Escherichia coli initiation factors
    • Hartz D, McPheeters DS, Gold L (1989) Selection of the initiator tRNA by Escherichia coli initiation factors. Genes Dev 3: 1899-1912
    • (1989) Genes Dev , vol.3 , pp. 1899-1912
    • Hartz, D.1    McPheeters, D.S.2    Gold, L.3
  • 19
    • 0001578170 scopus 로고
    • Protein synthesis
    • Neidhardt FC, Ingraham J, Low K, Magasanik B, Schaechter M, Umbarger H (eds), Washington, DC: American Society for Microbiology
    • Hershey JW (1987) Protein synthesis. In Escherichia coli and Salmonella Typhimurium: Cellular and Molecular Biology, Neidhardt FC, Ingraham J, Low K, Magasanik B, Schaechter M, Umbarger H (eds), Washington, DC: American Society for Microbiology
    • (1987) Escherichia Coli and Salmonella Typhimurium: Cellular and Molecular Biology
    • Hershey, J.W.1
  • 21
    • 0029950071 scopus 로고    scopus 로고
    • Ribosome recycling by ribosome recycling factor (RRF) - An important but overlooked step of protein biosynthesis
    • Janosi L, Hara H, Zhang S, Kaji A (1996) Ribosome recycling by ribosome recycling factor (RRF) - an important but overlooked step of protein biosynthesis. Adv Biophys 32: 121-201
    • (1996) Adv Biophys , vol.32 , pp. 121-201
    • Janosi, L.1    Hara, H.2    Zhang, S.3    Kaji, A.4
  • 22
    • 0018498843 scopus 로고
    • Nucleoside triphosphate regeneration decreases the frequency of translation errors
    • Jelenc PC, Kurland CG (1979) Nucleoside triphosphate regeneration decreases the frequency of translation errors. Proc Natl Acad Sci USA 76: 3174-3178
    • (1979) Proc Natl Acad Sci USA , vol.76 , pp. 3174-3178
    • Jelenc, P.C.1    Kurland, C.G.2
  • 23
    • 0033063428 scopus 로고    scopus 로고
    • Novel roles for classical factors at the interface between translation termination and initiation
    • Karimi R, Pavlov MY, Buckingham RH, Ehrenberg M (1999) Novel roles for classical factors at the interface between translation termination and initiation. Mol Cell 3: 601-609
    • (1999) Mol Cell , vol.3 , pp. 601-609
    • Karimi, R.1    Pavlov, M.Y.2    Buckingham, R.H.3    Ehrenberg, M.4
  • 24
    • 27944442879 scopus 로고    scopus 로고
    • Involvement of 16S rRNA nucleotides G1338 and A1339 in discrimination of initiator tRNA
    • Lancaster L, Noller HF (2005) Involvement of 16S rRNA nucleotides G1338 and A1339 in discrimination of initiator tRNA. Mol Cell 20: 623-632
    • (2005) Mol Cell , vol.20 , pp. 623-632
    • Lancaster, L.1    Noller, H.F.2
  • 26
    • 30444454334 scopus 로고    scopus 로고
    • The fidelity of translation initiation: Reciprocal activities of eIF1, IF3 and YciH
    • Lomakin IB, Shirokikh NE, Yusupov MM, Hellen CU, Pestova TV (2006) The fidelity of translation initiation: reciprocal activities of eIF1, IF3 and YciH. EMBO J 25: 196-210
    • (2006) EMBO J , vol.25 , pp. 196-210
    • Lomakin, I.B.1    Shirokikh, N.E.2    Yusupov, M.M.3    Hellen, C.U.4    Pestova, T.V.5
  • 27
    • 0033525871 scopus 로고    scopus 로고
    • In vitro study of two dominant inhibitory GTPase mutants of Escherichia coli translation initiation factor IF2. Direct evidence that GTP hydrolysis is necessary for factor recycling
    • Luchin S, Putzer H, Hershey JW, Cenatiempo Y, Grunberg-Manago M, Laalami S (1999) In vitro study of two dominant inhibitory GTPase mutants of Escherichia coli translation initiation factor IF2. Direct evidence that GTP hydrolysis is necessary for factor recycling. J Biol Chem 274: 6074-6079
    • (1999) J Biol Chem , vol.274 , pp. 6074-6079
    • Luchin, S.1    Putzer, H.2    Hershey, J.W.3    Cenatiempo, Y.4    Grunberg-Manago, M.5    Laalami, S.6
  • 29
    • 0017613160 scopus 로고
    • The effect of initiation factor IF-1 on the dissociation of 70-S ribosomes of Escherichia coli
    • Naaktgeboren N, Roobol K, Voorma HO (1977) The effect of initiation factor IF-1 on the dissociation of 70-S ribosomes of Escherichia coli. Eur J Biochem 72: 49-56
    • (1977) Eur J Biochem , vol.72 , pp. 49-56
    • Naaktgeboren, N.1    Roobol, K.2    Voorma, H.O.3
  • 30
    • 0029879006 scopus 로고    scopus 로고
    • Physiological effects of translation initiation factor IF3 and ribosomal protein L20 limitation in Escherichia coli
    • Olsson CL, Graffe M, Springer M, Hershey JW (1996) Physiological effects of translation initiation factor IF3 and ribosomal protein L20 limitation in Escherichia coli. Mol Gen Genet 250: 705-714
    • (1996) Mol Gen Genet , vol.250 , pp. 705-714
    • Olsson, C.L.1    Graffe, M.2    Springer, M.3    Hershey, J.W.4
  • 31
    • 0030928327 scopus 로고    scopus 로고
    • Fast recycling of Escherichia coli ribosomes requires both ribosome recycling factor (RRF) and release factor RF3
    • Pavlov MY, Freistroffer DV, MacDougall J, Buckingham RH, Ehrenberg M (1997) Fast recycling of Escherichia coli ribosomes requires both ribosome recycling factor (RRF) and release factor RF3. EMBO J 16: 4134-4141
    • (1997) EMBO J , vol.16 , pp. 4134-4141
    • Pavlov, M.Y.1    Freistroffer, D.V.2    MacDougall, J.3    Buckingham, R.H.4    Ehrenberg, M.5
  • 32
    • 18944364304 scopus 로고    scopus 로고
    • Sequence of steps in ribosome recycling as defined by kinetic analysis
    • Peske F, Rodnina MV, Wintermeyer W (2005) Sequence of steps in ribosome recycling as defined by kinetic analysis. Mol Cell 18: 403-412
    • (2005) Mol Cell , vol.18 , pp. 403-412
    • Peske, F.1    Rodnina, M.V.2    Wintermeyer, W.3
  • 33
    • 0035881527 scopus 로고    scopus 로고
    • Translation initiation factor IF3: Two domains, five functions, one mechanism?
    • Petrelli D, LaTeana A, Garofalo C, Spurio R, Pon CL, Gualerzi CO (2001) Translation initiation factor IF3: two domains, five functions, one mechanism? EMBO J 20: 4560-4569
    • (2001) EMBO J , vol.20 , pp. 4560-4569
    • Petrelli, D.1    LaTeana, A.2    Garofalo, C.3    Spurio, R.4    Pon, C.L.5    Gualerzi, C.O.6
  • 34
    • 0021506620 scopus 로고
    • Mechanism of protein biosynthesis in prokaryotic cells. Effect of initiation factor IF1 on the initial rate of 30S initiation complex formation
    • Pon CL, Gualerzi CO (1984) Mechanism of protein biosynthesis in prokaryotic cells. Effect of initiation factor IF1 on the initial rate of 30S initiation complex formation. FEBS Lett 175: 203-207
    • (1984) FEBS Lett , vol.175 , pp. 203-207
    • Pon, C.L.1    Gualerzi, C.O.2
  • 35
    • 0017077686 scopus 로고
    • Specificity and properties of the destabilization, induced by initiation factor IF-3, of ternary complexes of the 30-S ribosomal subunit, aminoacyl-tRNA and polynucleotides
    • Risuleo G, Gualerzi C, Pon C (1976) Specificity and properties of the destabilization, induced by initiation factor IF-3, of ternary complexes of the 30-S ribosomal subunit, aminoacyl-tRNA and polynucleotides. Eur J Biochem 67: 603-613
    • (1976) Eur J Biochem , vol.67 , pp. 603-613
    • Risuleo, G.1    Gualerzi, C.2    Pon, C.3
  • 36
    • 0028941626 scopus 로고
    • GTP consumption of elongation factor Tu during translation of heteropolymeric mRNAs
    • Rodnina MV, Wintermeyer W (1995) GTP consumption of elongation factor Tu during translation of heteropolymeric mRNAs. Proc Natl Acad Sci USA 92: 1945-1949
    • (1995) Proc Natl Acad Sci USA , vol.92 , pp. 1945-1949
    • Rodnina, M.V.1    Wintermeyer, W.2
  • 37
    • 0014964111 scopus 로고
    • Activity of initiation factor F3 in dissociating Escherichia coli ribosomes
    • Subramanian AR, Davis BD (1970) Activity of initiation factor F3 in dissociating Escherichia coli ribosomes. Nature 228: 1273-1275
    • (1970) Nature , vol.228 , pp. 1273-1275
    • Subramanian, A.R.1    Davis, B.D.2
  • 38
    • 0020709956 scopus 로고
    • Effect of Escherichia coli initiation factors on the kinetics of N-Acphe-tRNAPhe binding to 30S ribosomal subunits. A fluorescence stopped-flow study
    • Wintermeyer W, Gualerzi C (1983) Effect of Escherichia coli initiation factors on the kinetics of N-Acphe-tRNAPhe binding to 30S ribosomal subunits. A fluorescence stopped-flow study. Biochemistry 22: 690-694
    • (1983) Biochemistry , vol.22 , pp. 690-694
    • Wintermeyer, W.1    Gualerzi, C.2
  • 40
    • 0031026590 scopus 로고    scopus 로고
    • Effect of the amino acid attached to Escherichia coli initiator tRNA on its affinity for the initiation factor IF2 and on the IF2 dependence of its binding to the ribosome
    • Wu XQ, RajBhandary UL (1997) Effect of the amino acid attached to Escherichia coli initiator tRNA on its affinity for the initiation factor IF2 and on the IF2 dependence of its binding to the ribosome. J Biol Chem 272: 1891-1895
    • (1997) J Biol Chem , vol.272 , pp. 1891-1895
    • Wu, X.Q.1    RajBhandary, U.L.2
  • 41
    • 20444420154 scopus 로고    scopus 로고
    • Splitting of the posttermination ribosome into subunits by the concerted action of RRF and EF-G
    • Zavialov AV, Hauryliuk VV, Ehrenberg M (2005) Splitting of the posttermination ribosome into subunits by the concerted action of RRF and EF-G. Mol Cell 18: 675-686
    • (2005) Mol Cell , vol.18 , pp. 675-686
    • Zavialov, A.V.1    Hauryliuk, V.V.2    Ehrenberg, M.3
  • 42
    • 0023051839 scopus 로고
    • Binding of Escherichia coli protein synthesis initiation factor IF1 to 30S ribosomal subunits measured by fluorescence polarization
    • Zucker FH, Hershey JW (1986) Binding of Escherichia coli protein synthesis initiation factor IF1 to 30S ribosomal subunits measured by fluorescence polarization. Biochemistry 25: 3682-3690
    • (1986) Biochemistry , vol.25 , pp. 3682-3690
    • Zucker, F.H.1    Hershey, J.W.2


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