Theoretical and experimental considerations for interpretation of amide I bands in tissue

Vibrational Spectroscopy

Volumn 53, Issue 1, 2010, Pages 71-76

  Gough, Kathleen M ^a   Tzadu, Lsan ^b   Kastyak, Marzena Z ^c   Kuzyk, Alexandra C ^a   Julian, Robert L ^c  

^a UNIVERSITY OF MANITOBA   (Canada)

^b UNIVERSITY OF TORONTO   (Canada)

^c UNIVERSITY OF WISCONSIN MADISON   (United States)

Author keywords

Amide I; B3LYP 6 31+G(d) calculations; Focal plane array; Spectral and spatial resolution; Synchrotron FTIR

Indexed keywords

[CARBONYL; ALZHEIMER DISEASE; AMIDE I; AMIDE I BANDS; AMINO ACID RESIDUES; B3LYP/6-31+G(D) CALCULATIONS; BRAIN TISSUE; COMPUTATIONAL MODELING; COMPUTATIONAL RESULTS; DENSE CORE; DETECTOR ELEMENTS; EXPERIMENTAL SPECTRA; HOMOPEPTIDES; HYBRID DENSITY FUNCTIONAL; NORMAL MODES; SERS SPECTRUM; SINGLE PIXEL; SPATIAL RESOLUTION; SPATIALLY RESOLVED; SYNCHROTRON FTIR; TRANSGENIC MICE; WEALTH OF INFORMATION;

AMINO ACIDS; FOCAL PLANE ARRAYS; FOCUSING; FOURIER TRANSFORM INFRARED SPECTROSCOPY; IMAGE RESOLUTION; NUMERICAL METHODS; ORGANIC ACIDS; SYNCHROTRONS;

AMIDES;

EID: 77951208981     PISSN: 09242031     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.vibspec.2010.01.015     Document Type: Article

References (27)

1. Beekes M., Lasch P., and Naumann D. Vet. Microbiol. 123 (2007) 305-319
2. Bhargava R. Anal. Bioanal. Chem. 389 (2007) 1155-1169
3. Bird B., Romeo M., Laver N., and Diem M. J. Biophoton. 2 (2009) 37-46
4. Chew S.F., Wood B.R., Kanaan C., Browning J., MacGregor D., Davis I.D., Cebon J., Tait B.D., and McNaughton D. Tissue Antigens 69 Suppl. 1 (2007) 252-258
5. Das K., Kendall C., Isabelle M., Fowler C., Christie-Brown J., and Stone N. J. Photochem. Photobiol. B 92 (2008) 160-164
6. Rak M., Del Bigio M.R., Mai S., Westaway D., and Gough K. Biopolymers 87 (2007) 207-217
7. Gallant M., Rak M., Szeghalmi A., Del Bigio M.R., Westaway D., Yang J., Julian R., and Gough K.M. J. Biol. Chem. 281 (2006) 5-8
8. Webster G.T., de Villiers K.A., Egan T.J., Deed S., Tilley L., Tobin M.J., Bambery K.R., McNaughton D., and Wood B.R. Anal. Chem. 81 (2009) 2516-2524
9. Fuchs R.K., Allen M.R., Ruppel M.E., Diab T., Phipps R.J., Miller L.M., and Burr D.B. Matrix Biol. 27 (2008) 34-41
10. Paschalis E.P., Shane E., Lyritis G., Skarantavos G., Mendelsohn R., and Boskey A.L. J. Bone Miner. Res. 19 (2004) 2000-2004
11. Krimm S., and Bandekar J. Adv. Protein Chem. 38 (1986) 181-364
12. Brauner J.W., Flach C.R., and Mendelsohn R. J. Am. Chem. Soc. 127 (2005) 100-109
13. Bryan M.A., Brauner J.W., Anderle G., Flach C.R., Brodsky B., and Mendelsohn R. J. Am. Chem. Soc. 129 (2007) 7877-7884
14. Bour P., and Keiderling T.J. J. Phys. Chem. B 109 (2005) 5348-5357
15. Frisch M.J., et al. Gaussian 03, Revision C.02 (2004), Gaussian, Inc., Wallingford, CT
16. Tzadu, Lsan, M.Sc., Department of Chemistry, University of Manitoba, in preparation.
17. Mathcad 13, 1986-2001 MathSoft Engineering & Education, Inc.
18. Chishti M.A., Yang D., Janus C., Phinney A.L., Horne P., Pearson J., Strome R., Zuker N., Loukides J., French J., Turner S., Lozza G., Grilli M., Kunicki S., Morissette C., Paquette J., Gervais F., Bergeron C., Faser P.E., Carlson G.A., George-Hyslop P.St., and Westaway D. J. Biol. Chem. 276 (2001) 21562-21570
19. Gough K.M., Rak M., Bookatz A., Del Bigio M., Mai S., and Westaway D. Vib. Spectrosc. 38 (2005) 133-141
20. Warscheid B., Brucker S., Kallenbach A., Meyer H.E., Gerwert K., and Koetting C. Vib. Spectrosc. 48 (2008) 28-36
21. Kim Y.S., and Hochstrasser R.M. J. Phys. Chem. B 113 (2009) 8231-8251
22. Dawes R., and Gough K.M. J. Chem. Phys. 121 (2004) 1278-1284
23. Schultheis V., Reichold R., Schropp B., and Tavan P. J. Phys. Chem. B 112 (2008) 12217-12230
24. Lasch P., and Naumann D. Biochim. Biophys. Acta 1758 (2006) 814-829
25. Miller L.M., and Smith R.J. Vib. Spectrosc. 38 (2005) 237-240
26. Mohlenhoff B., Romeo M., Wood B.R., and Diem M. Biophys. J. 88 (2005) 3635-3640
27. Pijanka J.K., Kohler A., Yang Y., Dumas P., Chio-Srichan S., Manfait M., Sockalingum G.D., and Sulé-Suso J. Analyst 134 (2009) 1176-1181