Cloning and characterization of a new gene from the PAT protein family, in a marsupial, the stripe-faced dunnart (Sminthopsis macroura)

Molecular Reproduction and Development

Volumn 77, Issue 4, 2010, Pages 373-383

  Au, Phil Chi Khang ^a   Selwood, Lynne ^a   Familari, Mary ^a  

^a UNIVERSITY OF MELBOURNE   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

FAT DROPLET; PROTEIN; PROTEIN PAT; UNCLASSIFIED DRUG;

ANIMAL CELL; ANIMAL TISSUE; ARTICLE; BLASTOMERE; CONTROLLED STUDY; EMBRYO DEVELOPMENT; FEMALE; LIPID METABOLISM; MARSUPIAL; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; OOCYTE CLEAVAGE; PRIORITY JOURNAL; PROTEIN FAMILY; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SMINTHOPSIS MACROURA;

ACYLTRANSFERASES; AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; EMBRYO, NONMAMMALIAN; EMBRYONIC DEVELOPMENT; IN SITU HYBRIDIZATION, FLUORESCENCE; LIPID METABOLISM; MARSUPIALIA; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; OOCYTES; PHYLOGENY; PROTEIN CONFORMATION; SEQUENCE ALIGNMENT; TISSUE DISTRIBUTION;

MAMMALIA; METATHERIA; SMINTHOPSIS MACROURA;

EID: 77950563396     PISSN: 1040452X     EISSN: 10982795     Source Type: Journal    
DOI: 10.1002/mrd.21158     Document Type: Article

References (76)

1. Aswal AP, Raghav S, De S, Thakur M, Goswami SL, Datta TK. 2008. Expression stability of two housekeeping genes (18S rRNA and G3PDH) during in vitro maturation of follicular oocytes in buffalo (Bubalus bubalis). Anim Reprod Sci 103:164-171.
2. Au PCK, Nation A, Parrott M, Selwood L. 2010. Induced ovulation mimics the time-table of natural development in the stripe-faced dunnart, Sminthopsis macroura, and results in the birth of fertile young. Reproduction 139:419-425.
3. Bartz R, Zehmer JK, Zhu M, Chen Y, Serrero G, Zhao Y, Liu P. 2007. Dynamic activity of lipid droplets: Protein phosphorylation and GTP-mediated protein translocation. J Proteome Res 6:3256-3265.
4. Beller M, Riedel D, Jansch L, Dieterich G, Wehland J, Jackle H, Kuhnlein RP. 2006. Characterization of the drosophila lipid droplet subproteome. Mol Cell Proteomics 5:1082-1094. (Pubitemid 43985932)
5. Berloco M, Fanti L, Breiling A, Orlando V, Pimpinelli S. 2001. The maternal effect gene, abnormal oocyte (abo), of drosophila melanogaster encodes a specific negative regulator of histones. Proc Natl Acad Sci USA 98:12126-12131. (Pubitemid 32959838)
6. Blom N, Sicheritz-Ponten T, Gupta R, Gammeltoft S, Brunak S. 2004. Prediction of post-translational glycosylation and phosphorylation of proteins from the amino acid sequence. Proteomics 4:1633-1649. (Pubitemid 38738322)
7. Bolton VN, Oades PJ, Johnson MH. 1984. The relationship between cleavage, DNA replication, and gene expression in the mouse 2-cell embryo. J Embryol Exp Morphol 79:139-163.
8. Brasaemle DL, Dolios G, Shapiro L, Wang R. 2004. Proteomic analysis of proteins associated with lipid droplets of basal and lipolytically stimulated 3T3-L1 adipocytes. J Biol Chem 279:46835-46842. (Pubitemid 39518334)
9. Casey N, Selwood L. 2003. Removal of the shell coat affects maintenance of epithelia in blastocysts of the brushtail possum in vitro. Cells Tissue Organs 173:21-45. (Pubitemid 36173401)
10. Cermelli S, Guo Y, Gross SP, Welte MA. 2006. The lipid-droplet proteome reveals that droplets are a protein-storage depot. Curr Biol 16:1783-1795. (Pubitemid 44376718)
11. Chan AP, Kloc M, Etkin LD. 1999. fatvg encodes a new localized RNA that uses a 25-nucleotide element (FVLE) to localize to the vegetal cortex of Xenopus oocytes. Development 126:4943-4953. (Pubitemid 30000409)
12. Chan AP, Kloc M, Bilinski S, Etkin LD. 2001. The vegetally localized mRNA fatvg is associated with the germ plasm in the early embryo and is later expressed in the fat body. Mech Dev 100:137-140.
13. Chan AP, Kloc M, Larabell CA, LeGros M, Etkin LD. 2007. The maternally localized RNA fatvg is required for cortical rotation and germ cell formation. Mech Dev 124:350-363. (Pubitemid 46498710)
14. Christians E, Campion E, Thompson EM, Renard JP. 1995. Expression of the HSP 70.1 gene, a landmark of early zygotic activity in the mouse embryo, is restricted to the first burst of transcription. Development 121:113-122.
15. Dale L, Matthews G, Colman A. 1993. Secretion and mesoderminducing activity of the TGF-beta-related domain of Xenopus Vg1. EMBO J 12:4471-4480. (Pubitemid 23330253)
16. De Lesegno CV, Reynaud K, Pechoux C, Thoumire S, Chastant-Maillard S. 2008. Ultrastructure of canine oocytes during in vivo maturation. Mol Reprod Dev 75:115-125. (Pubitemid 350223996)
17. Ducharme NA, Bickel PE. 2008. Lipid droplets in lipogenesis and lipolysis. Endocrinology 149:942-949.
18. Dvorak AM, Morgan ES, Weller PF. 2003. RNA is closely associated with human mast cell lipid bodies. Histol Histopathol 18:943-968.
19. Eddy EM, Welch JE, Mori C, Fulcher KD, O'Brien DA. 1994. Role and regulation of spermatogenic cell-specific gene expression: enzymes of glycolysis. In: Bartke A, editor. Function of somatic cells in the testis. New York: Springer-Verlag. pp 362-372.
20. Felsenstein J. 1989. PHYLIP - Phylogeny inference package (Version 3.2). Cladistics 5:164-166.
21. Forristall C, Pondel M, Chen L, King ML. 1995. Patterns of localization and cytoskeletal association of two vegetally localized RNAs, Vg1 and Xcat-2. Development 121:201-208.
22. Frankenberg S, Selwood L. 1998. An ultrastructural study of the role of an extracellular matrix during normal cleavage in a marsupial, the brushtail possum. Mol Reprod Dev 50:420-433. (Pubitemid 28294784)
23. Frankenberg S, Selwood L. 2001. Ultrastructure of oogenesis in the brushtail possum. Mol Reprod Dev 58:297-306.
24. Fujimoto Y, Itabe H, Sakai J, Makita M, Noda J, Mori M, Higashi Y, Kojima S, Takano T. 2004. Identification of major proteins in the lipid droplet-enriched fraction isolated from the human hepatocyte cell line HuH7. Biochim Biophys Acta 1644:47-59.
25. Fujimoto T, Ohsaki Y, Cheng J, Suzuki M, Shinohara Y. 2008. Lipid droplets: A classic organelle with new outfits. Histochem Cell Biol 130:263-279.
26. Garcia A, Sekowski A, Subramanian V, Brasaemle DL. 2003. The central domain is required to target and anchor perilipin A to lipid droplets. J Biol Chem 278:625-635. (Pubitemid 36043616)
27. Genicot G, Leroy JL, Soom AV, Donnay I. 2005. The use of a fluorescent dye, nile red, to evaluate the lipid content of single mammalian oocytes. Theriogenology 63:1181-1194. (Pubitemid 40234521)
28. Godfrey GK. 1969. Reproduction in a laboratory colony of the marsupial mouse Sminthopsis larapinta (Marsupialia: Dasyuridae). Aust J Zool 17:637-654.
29. Greenspan P, Mayer EP, Fowler SD. 1985. Nile red: A selective fluorescent stain for intracellular lipid droplets. J Cell Biol 100:965-973. (Pubitemid 15135357)
30. Guo Y, Jangi S, Welte MA. 2005. Organelle-specific control of intracellular transport: Distinctly targeted isoforms of the regulator Klar. Mol Biol Cell 16:1406-1416. (Pubitemid 40349574)
31. Heasman J, Quarmby J, Wylie CC. 1984. The mitochondrial cloud of Xenopus oocytes: the source of the germinal granule material. Dev Biol 105:458-469. (Pubitemid 14021997)
32. Hinrichs K, Choi YH, Love LB, Varner DD, Love CC, Walckenaer BE. 2005. Chromatin configuration within the germinal vesicle of horse oocytes: Changes post mortem and relationship to meiotic and developmental competence. Biol Reprod 72:1142-1150. (Pubitemid 40547978)
33. Howitt CA. 1996. Improved ligation-anchored PCR strategy for identification of 50ends of transcripts. Biotechniques 21:34-38.
34. Johnston PG, Dean D, VandeBerg JL, Robinson ES. 1994. HPRT activity in embryos of a south american opossum monodelphis domestica. Reprod Fertil Dev 6:529-532.
35. Joseph EM, Melton DM. 1998. Mutant Vg1 ligands disrupt endoderm and mesoderm formation in Xenopus laevis. Oncogene 14:2677-2685.
36. Kloc M, Etkin LD. 1995. Two distinct pathways for the localization of RNAs at the vegetal cortex in Xenopus oocytes. Development 121:287-297.
37. Kress A, Selwood L. 2003. Conceptus polarity and cell-zona adhesion during early cleavage (fertilized tubal egg to 8-cell stage) in the marsupial sminthopsis macroura. Cells Tissues Organs 175:9-24. (Pubitemid 37409856)
38. Kress A, Selwood L. 2004. Precedence of cell-zona adhesion over cell-cell adhesion during marsupial blastocyst formation prohibits morula formation and ensures that both the pluriblast and trophoblast are superficial. Cells Tissues Organs 117:87-103. (Pubitemid 39140463)
39. Kress A, Merry NE, Selwood L. 2001. Oogenesis in the marsupial stripe-faced dunnart, Sminthopsis macroura. Cells Tissues Organs 168:188-202. (Pubitemid 32171063)
40. Lambert C, Leonard N, De Bolle X, Depiereux E. 2002. ESyPred3D: Prediction of proteins 3D structures. Bioinformatics 18:1250-1256.
41. Latham KE. 1999. Mechanisms and control of embryonic genome activation in mammalian embryos. Int Rev Cytol 193:71-124.
42. Latham KE, Schultz RM. 2001. Embryonic genome activation. Front Biosci 6:748-759.
43. Liu H, Aoki F. 2002. Transcriptional activity associated with meiotic competence in fully grown mouse GV oocytes. Zygote 10:327-332. (Pubitemid 135714201)
44. Liu Y, Sui HS, Wang HL, Yuan JH, Luo MJ, Xia P, Tan JH. 2006. Germinal vesicle chromatin configurations of bovine oocytes. Microsc Res Tech 69:799-807. (Pubitemid 44568756)
45. Melton DA. 1987. Translocation of a localized maternal mRNA to the vegetal pole of Xenopus oocytes. Nature 328:80-82. (Pubitemid 17103586)
46. Merry NE, Johnson MH, Gehring CA, Selwood L. 1995. Cytoskeletal organization in the oocyte, zygote, and early cleaving embryo of the stripe-faced dunnart (Sminthopsis macroura). Mol Reprod Dev 41:212-224.
47. Mori C, Welch JE, Sakai Y, Eddy EM. 1992. In situ localization of spermatogenic cell-specific glyceraldehyde 3-phosphate dehydrogenase (Gapd-s) messenger ribonucleic acid in mice. Biol Reprod 46:859-868.
48. Nakamura N, Fujimoto T. 2003. Adipose differentiation-related protein has two independent domains for targeting to lipid droplets. Biochem Biophys Res Commun 306:333-338. (Pubitemid 36683077)
49. Nieuwkoop PD. 1969. The formation of mesoderm in urodelean amphibians. I. Induction by the endoderm. Roux's Arch Entw Mech Org 162:341-373.
50. Ohsaki Y, Maeda T, Maeda M, Tauchi-Sato K, Fujimoto T. 2006. Recruitment of TIP47 to lipid droplets is controlled by the putative hydrophobic cleft. Biochem Biophys Res Commun 347:279-287. (Pubitemid 44015675)
51. Renfree MB, Lewis AM. 1996. Cleavage in vivo and in vitro in the Marsupial Macropus eugenii. Reprod Fertil Dev 8:725-742. (Pubitemid 26288047)
52. Sathananthan AH, Selwood L, Douglas I, Nanayakkara K. 1997. Early cleavage to formation of the unilaminar blastocyst in the marsupial Antichinus stuartii: Ultrastructure. Reprod Fertil Dev 9:201-212. (Pubitemid 27286068)
53. Sato S, Fukasawa M, Yamakawa Y, Natsume T, Suzuki T, Shoji I, Aizaki H, Miyamura T, Nishijima M. 2006. Proteomic profiling of lipid droplet proteins in hepatoma cell lines expressing hepatitisC virus core protein. J Biochem 139:921-930.
54. Schultz RM. 1993. Regulation of zygotic gene activation in the mouse. Bioassays 15:531-538.
55. Selwood L. 1987. Embryonic development in culture of two dasyurid marsupials, Sminthopsis crassicaudata (Gould) and Sminthopsis macroura (Spencer) during cleavage and blastocyst formation. Gamete Res 16:355-370. (Pubitemid 17062875)
56. Selwood L. 1989a. Marsupial pre-implantation embryos in vivo and in vitro. Prog Clin Biol Res 294:225-236.
57. Selwood L. 1989b. Development in vitro of investment-free marsupial embryos during cleavage and early blastocyst formation. Gamete Res 23:399-413.
58. Selwood L. 1992. Mechanisms underlying the development of pattern in marsupial embryos. Curr Top Dev Biol 27:175-233.
59. Selwood L. 2001. Mechanisms for pattern formation leading to axis formation and lineage allocation in mammals: A marsupial perspective. Reproduction 121:677-683. (Pubitemid 32472053)
60. Selwood L, Hickford D. 1999. Early cell lineages in marsupial embryos. Cell Lineage and Fate Determination 34:505-519.
61. Selwood L, Smith D. 1990. Time-lapse analysis and normal stages of development of cleavage and blastocyst formation in the marsupials the brown antechinus and the stripe-faced dunnart. Mol Reprod Dev 26:53-62. (Pubitemid 20154992)
62. Selwood L, Woolley P. 1991. A timetable of embryonic development and ovarian and uterine changes during pregnancy, in the stripe-faced dunnart, Sminthopsis macroura (Marsupialia: Dasyuridae). J Reprod Fertil 91:213-227.
63. Sztalryd C, XuG, Dorward H, Tansey JT, Contreras JA, Kimmel AR, Londos C. 2003. Perilipin A is essential for the translocation of hormone-sensitive lipase during lipolytic activation. J Cell Biol 161:1093-1103.
64. Tan JH,WangHL, Sun XS, Liu Y, Sui HS, Zhang J. 2009. Chromatin configurations in the germinal vesicle of mammalian oocytes. Mol Hum Reprod 15:1-9.
65. Tarkowski A, Wroblewska J. 1967. Development of blastomeres of mouse eggs isolated at the 4- and 8-cell stage. J Embryol Exp Morphol 18:155-180.
66. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. 1997. The ClustalX windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 24:4876-4882. (Pubitemid 28022245)
67. Thomsen GH, Melton DM. 1993. Processed Vg1 protein is an axial mesoderm inducer in Xenopus. Cell 74:433-441.
68. Umlauf E, Csaszar E, Moertelmaier M, Schuetz GJ, Parton RG, Prohaska R. 2004. Association of stomatin with lipid bodies. J Biol Chem 279:23699-23709.
69. Wan HC, Melo RC, Jin Z, Dvorak AM, Weller PF. 2007. Roles and origins of leukocyte lipid bodies: Proteomic and ultrastructural studies. FASEB J 21:167-178. (Pubitemid 46061356)
70. Welch JE, Schatte EC, O'Brien DA, Eddy EM. 1992. Expression of a glyceraldehyde 3-phosphate dehydrogenase gene specific to mouse spermatogenic cells. Biol Reprod 46:869-878.
71. Welte MA, Gross SP, Postner M, Block SM, Wieschaus EF. 1998. Developmental regulation of vesicle transport in Drosophila embryos: Forces and kinetics. Cell 92:547-557. (Pubitemid 28101117)
72. Welte MA, Cermelli S, Griner J, Viera A, Guo Y, Kim DH, Gindhart JG, Gross SP. 2005. Regulation of lipid-droplet transport by the perilipin homolog LSD2. Curr Biol 15:1266-1275. (Pubitemid 41026592)
73. Wu CC, Howell KE, Neville MC, Yates JR III, McManaman JL. 2000. Proteomics reveal a link between the endoplasmic reticulum and lipid secretory mechanisms in mammary epithelial cells. Electrophoresis 21:3470-3482.
74. Zhang J, Houston DW, King ML, Payne C, Wylie CC, Heasman J. 1998. The role of maternal VegT in establishign the primary germ layers in Xenopus embryos. Cell 94:515-524. (Pubitemid 28391867)
75. Zhang HH, Souza SC, Muliro KV, Kraemer FB, Obin MS, Greenberg AS. 2003. Lipase-selective functional domains of perilipin A differentially regulate constitutive and protein kinase A-stimulated lipolysis. J Biol Chem 278:51535-51542.
76. Ziomek C, Johnson M. 1982. The roles of phenotype and position in guiding the fate of 16-cell mouse blastomeres. Dev Biol 91:440-447. (Pubitemid 12006856)