fatvg encodes a new localized RNA that uses a 25-nucleotide element (FVLE1) to localize to the vegetal cortex of Xenopus oocytes

Development

Volumn 126, Issue 22, 1999, Pages 4943-4953

  Chan, Agnes P ^a   Kloc, Malgorzata ^a   Etkin, Laurence D ^a  

^a UNIVERSITY OF TEXAS   (United States)

Author keywords

fatvg; Oocyte; RNA localization; Xenopus

Indexed keywords

MESSENGER RNA; PROTEIN; PROTEIN FATVG; RNA; UNCLASSIFIED DRUG;

ANIMAL CELL; ARTICLE; CONTROLLED STUDY; EMBRYO; EMBRYO DEVELOPMENT; GENE FUNCTION; GENE ISOLATION; NONHUMAN; NUCLEOTIDE SEQUENCE; OOCYTE; OOCYTE DEVELOPMENT; PRIORITY JOURNAL; PROTEIN FAMILY; RNA TRANSCRIPTION; XENOPUS;

3' UNTRANSLATED REGIONS; AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; CELL POLARITY; GLYCOPROTEINS; MEMBRANE PROTEINS; MOLECULAR SEQUENCE DATA; OOCYTES; RNA, MESSENGER; SEQUENCE HOMOLOGY, AMINO ACID; SIGNAL TRANSDUCTION; TRANSFORMING GROWTH FACTOR BETA; XENOPUS LAEVIS; XENOPUS PROTEINS;

ANIMALIA; MAMMALIA;

EID: 0033458730     PISSN: 09501991     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (75)

1. Altschul, S. F., Gish, W., Miller, W., Myers, E. W. and Lipman, D. J. (1990). Basic local alignment search tool. J. Mol. Biol. 215, 403-410.
2. Bally-Cuif, L., Schatz, W. J. and Ho, R. K. (1998). Characterization of the zebrafish Orb/CPEB-related RNA binding protein and localization of maternal components in the zebrafish oocyte. Mech. Dev. 77, 31-47.
3. Bashirullah, A., Cooperstock, R. L. and Lipshitz, H. D. (1998). RNA localization in development. Annu. Rev. Biochem. 67, 335-394.
4. Berleth, T., Burri, M., Thoma, G., Bopp, D., Richstein, S., Frigerio, G., Noll, M. and Nusslein-Volhard, C. (1988). The role of localization of bicoid RNA in organizing the anterior pattern of the Drosophila embryo. EMBO J. 7, 1749-1756.
5. Brasaemle, D. L., Barber, T., Wolins, N. E., Serrero, G., Blanchette-Mackie, E. J. and Londos, C. (1997). Adipose differentiation-related protein is an ubiquitously expressed lipid storage droplet-associated protein. J. Lipid Res. 38, 2249-2263.
6. Danilchik, M. V. and Gerhart, J. C. (1987). Differentiation of the animal-vegetal axis in Xenopus laevis oocytes. I. Polarized intracellular translocation of platelets establishes the yolk gradient. Dev. Biol. 122, 101-112.
7. Deshler, J. O., Highett, M. I., Abramson, T. and Schnapp, B. J. (1998). A highly conserved RNA-binding protein for cytoplasmic mRNA localization in vertebrates. Curr. Biol. 8, 489-496.
8. Deshler, J. O., Highett, M. I. and Schnapp, B. J. (1997). Localization of Xenopus Vg1 mRNA by Vera protein and the endoplasmic reticulum. Science 276, 1128-1131.
9. Diaz, E. and Pfeffer, S. R. (1998). TIP47: a cargo selection device for mannose 6-phosphate receptor trafficking. Cell 93, 433-443.
10. Driever, W., Siegel, V. and Nusslein-Volhard, C. (1990). Autonomous determination of anterior structures in the early Drosophila embryo by the bicoid morphogen. Development 109, 811-820.
11. Dumont, J. N. (1972). Oogenesis in Xenopus laevis (Daudin). 1. Stages of oocyte development in laboratory maintained animals. J. Morphol. 136, 153-179.
12. Ephrussi, A., Dickinson, L. K. and Lehmann, R. (1991). Oskar organizes the germ plasm and directs localization of the posterior determinant nanos. Cell 66, 37-50.
13. Ephrussi, A. and Lehmann, R. (1992). Induction of germ cell formation by oskar. Nature 358, 387-392.
14. Forristall, C., Pondel, M., Chen, L. and King, M. L. (1995). Patterns of localization and cytoskeletal association of two vegetally localized RNAs, Vg1 and Xcat-2. Development 121, 201-208.
15. Frigerio, G., Burri, M., Bopp, D., Baumgartner, S. and Noll, M. (1986). Structure of the segmentation gene paired and the Drosophila PRD gene set as part of a gene network. Cell 47, 735-746.
16. Gao, J. and Serrero, G. (1999). Adipose differentiation related protein (ADRP) expressed in transfected COS-7 cells selectively stimulates long chain fatty acid uptake. J. Biol. Chem. 274, 16825-16830.
17. Gautreau, D., Cote, C. A. and Mowry, K. L. (1997). Two copies of a subelement from the Vg1 RNA localization sequence are sufficient to direct vegetal localization in Xenopus oocytes. Development 124, 5013-5020.
18. Greenberg, A. S., Egan, J. J., Wek, S. A., Moos, M. C., Jr., Londos, C. and Kimmel, A. R. (1993). Isolation of cDNAs for perilipins A and B: sequence and expression of lipid droplet-associated proteins of adipocytes. Proc. Natl. Acad. Sci. USA 90, 12035-12039.
19. Gururajan, R., Perry-O'Keefe, H., Melton, D. A. and Weeks, D. L. (1991). The Xenopus localized messenger RNA An3 may encode an ATP-dependent RNA helicase. Nature 349, 717-719.
20. Harland, R. M. (1991). In situ hybridization: an improved whole-mount method for Xenopus embryos. Meth. Cell Biol. 36, 685-695.
21. Havin, L., Git, A., Elisha, Z., Oberman, F., Yaniv, K., Schwartz, S. P., Standart, N. and Yisraeli, J. K. (1998). RNA-binding protein conserved in both microtubule-and microfilament-based RNA localization. Genes Dev. 12, 1593-1598.
22. Heasman, J., Quarmby, J. and Wylie, C. C. (1984). The mitochondrial cloud of Xenopus oocytes: the source of germinal granule material. Dev. Biol. 105, 458-469.
23. Heid, H. W., Moll, R., Schwetlick, I., Rackwitz, H. R. and Keenan, T. W. (1998). Adipophilin is a specific marker of lipid accumulation in diverse cell types and diseases. Cell Tissue Res. 294, 309-321.
24. Holowacz, T. and Elinson, R. P. (1995). Properties of the dorsal activity found in the vegetal cortical cytoplasm of Xenopus eggs. Development 121, 2789-2798.
25. Horb, M. E. and Thomsen, G. H. (1997). A vegetally localized T-box transcription factor in Xenopus eggs specifies mesoderm and endoderm and is essential for embryonic mesoderm formation. Development 124, 1689-1698.
26. Houston, D. W., Zhang, J., Maines, J. Z., Wasserman, S. A. and King, M. L. (1998). A Xenopus DAZ-like gene encodes an RNA component of germ plasm and is a functional homologue of Drosophila boule. Development 125, 171-180.
27. Hudson, C. and Woodland, H. R. (1998). Xpat, a gene expressed specifically in germ plasm and primordial germ cells of Xenopus laevis. Mech. Dev. 73, 159-168.
28. Hudson, J. W., Alarcon, V. B. and Elinson, R. P. (1996). Identification of new localized RNAs in the Xenopus oocyte by differential display PCR. Dev. Genet. 19, 190-198.
29. Hyatt, B. A. and Yost, H. J. (1998). The left-right coordinator: the role of Vg1 in organizing left-right axis formation. Cell 93, 37-46.
30. Jiang, H. P., Harris, S. E. and Serrero, G. (1992). Molecular cloning of a differentiation-related mRNA in the adipogenic cell line 1246. Cell Growth Differ. 3, 21-30.
31. Jiang, H. P. and Serrero, G. (1992). Isolation and characterization of a full-length cDNA coding for an adipose differentiation-related protein. Proc. Natl. Acad. Sci. USA 89, 7856-7860.
32. Kessler, D. S. and Melton, D. A. (1995). Induction of dorsal mesoderm by soluble, mature Vg1 protein. Development 121, 2155-2164.
33. Kim-Ha, J., Smith, J. L. and Macdonald, P. M. (1991). oskar mRNA is localized to the posterior pole of the Drosophila oocyte. Cell 66, 23-35.
34. Kim-Ha, J., Webster, P. J., Smith, J. L. and Macdonald, P. M. (1993). Multiple RNA regulatory elements mediate distinct steps in localization of oskar mRNA. Development 119, 169-178.
35. Kislauskis, E. H., Zhu, X. and Singer, R. H. (1997). beta-Actin messenger RNA localization and protein synthesis augment cell motility. J. Cell Biol. 136, 1263-1270.
36. Kloc, M. and Etkin, L. D. (1995). Two distinct pathways for the localization of RNAs at the vegetal cortex in Xenopus oocytes. Development 121, 287-297.
37. Kloc, M. and Etkin, L. D. (1998). Apparent continuity between the messenger transport organizer and late RNA localization pathways during oogenesis in Xenopus. Mech. Dev. 73, 95-106.
38. Kloc, M. and Etkin, L. D. (1999). Analysis of localized RNAs in Xenopus oocytes. In A Comparative Methods Approach to the Study of Oocytes and Embryos (ed. J. D. Richter), pp. 256-278. New York: Oxford University Press.
39. Kloc, M., Spohr, G. and Etkin, L. D. (1993). Translocation of repetitive RNA sequences with the germ plasm in Xenopus oocytes. Science 262, 1712-1714.
40. Kozak, M. (1991). Structural features in eukaryotic mRNAs that modulate the initiation of translation. J. Biol. Chem. 266, 19867-19870.
41. Ku, M. and Melton, D. A. (1993). Xwnt-11: a maternally expressed Xenopus wnt gene. Development 119, 1161-1173.
42. Lasko, P. (1999). RNA sorting in Drosophila oocytes and embryos. FASEB J. 13, 421-433.
43. Lawrence, J. B. and Singer, R. H. (1986). Intracellular localization of messenger RNAs for cytoskeletal proteins. Cell 45, 407-415.
44. Lemaire, P., Garrett, N. and Gurdon, J. B. (1995). Expression cloning of Siamois, a Xenopus homeobox gene expressed in dorsal-vegetal cells of blastulae and able to induce a complete secondary axis. Cell 81, 85-94.
45. Linnen, J. M., Bailey, C. P. and Weeks, D. L. (1993). Two related localized mRNAs from Xenopus laevis encode ubiquitin-like fusion proteins. Gene 128, 181-188.
46. Londos, C., Brasaemle, D. L., Gruia-Gray, J., Servetnick, D. A., Schultz, C. J., Levin, D. M. and Kimmel, A. R. (1995). Perilipin: unique proteins associated with intracellular neutral lipid droplets in adipocytes and steroidogenic cells. Biochem. Soc. Trans. 23, 611-615.
47. Long, R. M., Singer, R. H., Meng, X., Gonzalez, I., Nasmyth, K. and Jansen, R. P. (1997). Mating type switching in yeast controlled by asymmetric localization of ASH1 mRNA. Science 277, 383-387.
48. Lupas, A. (1996). Prediction and analysis of coiled-coil structures. Methods Enzymol. 266, 513-525.
49. Lustig, K. D., Kroll, K. L., Sun, E. E. and Kirschner, M. W. (1996). Expression cloning of a Xenopus T-related gene (Xombi) involved in mesodermal patterning and blastopore lip formation. Development 122, 4001-4012.
50. Macdonald, P. M. and Kerr, K. (1998). Mutational analysis of an RNA recognition element that mediates localization of bicoid mRNA. Mol. Cell. Biol. 18, 3788-3795.
51. Macdonald, P. M., Kerr, K., Smith, J. L. and Leask, A. (1993). RNA regulatory element BLE1 directs the early steps of bicoid mRNA localization. Development 118, 1233-1243.
52. Maegawa, S., Yasuda, K. and Inoue, K. (1999). Maternal mRNA localization of zebrafish DAZ-like gene. Mech. Dev. 81, 223-226.
53. McGrew, L. L. and Richter, J. D. (1990). Translational control by cytoplasmic polyadenylation during Xenopus oocyte maturation: characterization of cis and trans elements and regulation by cyclin/MPF. EMBO J. 9, 3743-3751.
54. Mosquera, L., Forristall, C., Zhou, Y. and King, M. L. (1993). A mRNA localized to the vegetal cortex of Xenopus oocytes encodes a protein with a nanos-like zinc finger domain. Development 117, 377-386.
55. Mowry, K. L. and Melton, D. A. (1992). Vegetal messenger RNA localization directed by a 340-nt RNA sequence element in Xenopus oocytes. Science 255, 991-994.
56. Paris, J. and Richter, J. D. (1990). Maturation-specific polyadenylation and translational control: diversity of cytoplasmic polyadenylation elements, influence of poly(A) tail size, and formation of stable polyadenylation complexes. Mol. Cell. Biol. 10, 5634-5645.
57. Rebagliati, M. R., Weeks, D. L., Harvey, R. P. and Melton, D. A. (1985). Identification and cloning of localized maternal RNAs from Xenopus eggs. Cell 42, 769-777.
58. Reddy, B. A., Kloc, M. and Etkin, L. D. (1992). The cloning and characterization of a localized maternal transcript in Xenopus laevis whose zygotic counterpart is detected in the CNS. Mech. Dev. 39, 143-150.
59. Scherer, P. E., Bickel, P. E., Kotler, M. and Lodish, H. F. (1998). Cloning of cell-specific secreted and surface proteins by subtractive antibody screening. Nat. Biotechnol. 16, 581-586.
60. Schnapp, B. J., Arn, E. A., Deshler, J. O. and Highett, M. I. (1997). RNA localization in Xenopus oocytes. Semin. Cell. Dev. Biol. 8, 529-540.
61. Schroeder, K. E. and Yost, H. J. (1996). Xenopus poly (A) binding protein maternal RNA is localized during oogenesis and associated with large complexes in blastula. Dev. Genet. 19, 268-276.
62. Shestakova, E. A., Wyckoff, J., Jones, J., Singer, R. H. and Condeelis, J. (1999). Correlation of beta-actin messenger RNA localization with metastatic potential in rat adenocarcinoma cell lines. Cancer Res. 59, 1202-1205.
63. Smith, R. F., Wiese, B. A., Wojzynski, M. K., Davison, D. B. and Worley, K. C. (1996). BCM Search Launcher - an integrated interface to molecular biology data base search and analysis services available on the World Wide Web. Genome Res. 6, 454-462.
64. Stennard, F., Carnac, G. and Gurdon, J. B. (1996). The Xenopus T-box gene, Antipodean, encodes a vegetally localised maternal mRNA and can trigger mesoderm formation. Development 122, 4179-4188.
65. Swalla, B. J. and Jeffery, W. R. (1996a). Localization of ribosomal protein L5 mRNA in myoplasm during ascidian development. Dev. Genet. 19, 258-267.
66. Swalla, B. J. and Jeffery, W. R. (1996b). PCNA mRNA has a 3′UTR antisense to yellow crescent RNA and is localized in ascidian eggs and embryos. Dev. Biol. 178, 23-34.
67. Takizawa, P. A., Sil, A., Swedlow, J. R., Herskowitz, I. and Vale, R. D. (1997). Actin-dependent localization of an RNA encoding a cell-fate determinant in yeast. Nature 389, 90-93.
68. Than, N. G., Sumegi, B., Than, G. N., Kispal, G. and Bohn, H. (1998). Cloning and sequence analysis of cDNAs encoding human placental tissue protein 17 (PP17) variants. Eur. J. Biochem. 258, 752-757.
69. Vassalli, J. D., Huarte, J., Belin, D., Gubler, P., Vassalli, A., O'Connell, M. L., Parton, L. A., Rickles, R. J. and Strickland, S. (1989). Regulated polyadenylation controls mRNA translation during meiotic maturation of mouse oocytes. Genes Dev. 3, 2163-2171.
70. Wang, C. and Lehmann, R. (1991). Nanos is the localized posterior determinant in Drosophila. Cell 66, 637-647.
71. Weeks, D. L. and Melton, D. A. (1987a). A maternal mRNA localized to the animal pole of Xenopus eggs encodes a subunit of mitochondrial ATPase. Proc. Natl. Acad. Sci. USA 84, 2798-2802.
72. Weeks, D. L. and Melton, D. A. (1987b). A maternal mRNA localized to the vegetal hemisphere in Xenopus eggs codes for a growth factor related to TGF-beta. Cell 51, 861-867.
73. Zhang, J. and King, M. L. (1996). Xenopus VegT RNA is localized to the vegetal cortex during oogenesis and encodes a novel T-box transcription factor involved in mesodermal patterning. Development 122, 4119-4129.
74. Zhou, Y. and King, M. L. (1996a). Localization of Xcat-2 RNA, a putative germ plasm component, to the mitochondrial cloud in Xenopus stage I oocytes. Development 122, 2947-2953.
75. Zhou, Y. and King, M. L. (1996b). RNA transport to the vegetal cortex of Xenopus oocytes. Dev. Biol. 179, 173-183.