-
2
-
-
27744587931
-
Basic fibroblast growth factor (FGF-2) overexpression is a risk factor for esophageal cancer recurrence and reduced survival, which is ameliorated by coexpression of the FGF-2 antisense gene
-
Barclay C, Li AW, Geldenhuys L, Baguma-Nibasheka M, Porter GA, Veugelers PJ, Murphy PR, Casson AG 2005 Basic fibroblast growth factor (FGF-2) overexpression is a risk factor for esophageal cancer recurrence and reduced survival, which is ameliorated by coexpression of the FGF-2 antisense gene. Clin Cancer Res 11:7683-7691
-
(2005)
Clin Cancer Res
, vol.11
, pp. 7683-7691
-
-
Barclay, C.1
Li, A.W.2
Geldenhuys, L.3
Baguma-Nibasheka, M.4
Porter, G.A.5
Veugelers, P.J.6
Murphy, P.R.7
Casson, A.G.8
-
3
-
-
0032954333
-
Alterations in expression of basic fibroblast growth factor (FGF) 2 and its receptor FGFR-1 in human prostate cancer
-
Giri D, Ropiquet F, Ittmann M 1999 Alterations in expression of basic fibroblast growth factor (FGF) 2 and its receptor FGFR-1 in human prostate cancer. Clin Cancer Res 5:1063-1071
-
(1999)
Clin Cancer Res
, vol.5
, pp. 1063-1071
-
-
Giri, D.1
Ropiquet, F.2
Ittmann, M.3
-
4
-
-
0025270573
-
Messenger RNA stabilization accounts for elevated basic fibroblast growth factor transcript levels in a human astrocytoma cell line
-
Murphy PR, Guo JZ, Friesen HG 1990 Messenger RNA stabilization accounts for elevated basic fibroblast growth factor transcript levels in a human astrocytoma cell line. Mol Endocrinol 4:196-200
-
(1990)
Mol Endocrinol
, vol.4
, pp. 196-200
-
-
Murphy, P.R.1
Guo, J.Z.2
Friesen, H.G.3
-
5
-
-
0024564342
-
Elevated expression of basic fibroblast growth factor messenger ribonucleic acid in acoustic neuromas
-
Murphy PR, Myal Y, Sato Y, Sato R, West M, Friesen HG 1989 Elevated expression of basic fibroblast growth factor messenger ribonucleic acid in acoustic neuromas. Mol Endocrinol 3:225-231
-
(1989)
Mol Endocrinol
, vol.3
, pp. 225-231
-
-
Murphy, P.R.1
Myal, Y.2
Sato, Y.3
Sato, R.4
West, M.5
Friesen, H.G.6
-
6
-
-
0030801996
-
Expression of basic fibroblast growth factor (FGF-2)-associated with tumour proliferation in human pancreatic carcinoma
-
Yamazaki K, Nagao T, Yamaguchi T, Saisho H, Kondo Y 1997 Expression of basic fibroblast growth factor (FGF-2)-associated with tumour proliferation in human pancreatic carcinoma. Virchows Arch 431:95-101
-
(1997)
Virchows Arch
, vol.431
, pp. 95-101
-
-
Yamazaki, K.1
Nagao, T.2
Yamaguchi, T.3
Saisho, H.4
Kondo, Y.5
-
7
-
-
0032938857
-
A new 34-kilodalton isoform of human fibroblast growth factor 2 is cap dependently synthesized by using a non-AUG start codon and behaves as a survival factor
-
Arnaud E, Touriol C, Boutonnet C, Gensac MC, Vagner S, Prats H, Prats AC 1999 A new 34-kilodalton isoform of human fibroblast growth factor 2 is cap dependently synthesized by using a non-AUG start codon and behaves as a survival factor. Mol Cell Biol 19:505-514
-
(1999)
Mol Cell Biol
, vol.19
, pp. 505-514
-
-
Arnaud, E.1
Touriol, C.2
Boutonnet, C.3
Gensac, M.C.4
Vagner, S.5
Prats, H.6
Prats, A.C.7
-
8
-
-
0026025825
-
Alternative initiation of translation determines cytoplasmic or nuclear localization of basic fibroblast growth factor
-
Bugler B, Amalric F, Prats H 1991 Alternative initiation of translation determines cytoplasmic or nuclear localization of basic fibroblast growth factor. Mol Cell Biol 11:573-577
-
(1991)
Mol Cell Biol
, vol.11
, pp. 573-577
-
-
Bugler, B.1
Amalric, F.2
Prats, H.3
-
9
-
-
0008563256
-
Human basic fibroblast growth factor gene encodes four polypeptides: Three initiate translation from non-AUG codons
-
Florkiewicz RZ, Sommer A 1989 Human basic fibroblast growth factor gene encodes four polypeptides: three initiate translation from non-AUG codons. Proc Natl Acad Sci USA 86:3978-3981
-
(1989)
Proc Natl Acad Sci USA
, vol.86
, pp. 3978-3981
-
-
Florkiewicz, R.Z.1
Sommer, A.2
-
10
-
-
0008566513
-
High molecular mass forms of basic fibroblast growth factor are initiated by alternative CUG codons
-
Prats H, Kaghad M, Prats AC, Klagsbrun M, Lélias JM, Liauzun P, Chalon P, Tauber JP, Amalric F, Smith JA, Caput D 1989 High molecular mass forms of basic fibroblast growth factor are initiated by alternative CUG codons. Proc Natl Acad Sci USA 86:1836-1840
-
(1989)
Proc Natl Acad Sci USA
, vol.86
, pp. 1836-1840
-
-
Prats, H.1
Kaghad, M.2
Prats, A.C.3
Klagsbrun, M.4
Lélias, J.M.5
Liauzun, P.6
Chalon, P.7
Tauber, J.P.8
Amalric, F.9
Smith, J.A.10
Caput, D.11
-
11
-
-
0030812543
-
FGF-2 antisense RNA encodes a nuclear protein with MutT-like antimutator activity
-
Li AW, Too CK, Knee R, Wilkinson M, Murphy PR 1997 FGF-2 antisense RNA encodes a nuclear protein with MutT-like antimutator activity. Mol Cell Endocrinol 133:177-182
-
(1997)
Mol Cell Endocrinol
, vol.133
, pp. 177-182
-
-
Li, A.W.1
Too, C.K.2
Knee, R.3
Wilkinson, M.4
Murphy, P.R.5
-
12
-
-
0029941442
-
The basic fibroblast growth factor (FGF-2) antisense RNA (GFG) is translated into a MutT-related protein in vivo
-
Li AW, Too CK, Murphy PR 1996 The basic fibroblast growth factor (FGF-2) antisense RNA (GFG) is translated into a MutT-related protein in vivo. Biochem Biophys Res Commun 223:19-23
-
(1996)
Biochem Biophys Res Commun
, vol.223
, pp. 19-23
-
-
Li, A.W.1
Too, C.K.2
Murphy, P.R.3
-
13
-
-
35448989781
-
Alternative splicing of the FGF antisense gene: Differential subcellular localization in human tissues and esophageal adenocarcinoma
-
Zhang SC, Barclay C, Alexander LA, Geldenhuys L, Porter GA, Casson AG, Murphy PR 2007 Alternative splicing of the FGF antisense gene: differential subcellular localization in human tissues and esophageal adenocarcinoma. J Mol Med 85:1215-1228
-
(2007)
J Mol Med
, vol.85
, pp. 1215-1228
-
-
Zhang, S.C.1
Barclay, C.2
Alexander, L.A.3
Geldenhuys, L.4
Porter, G.A.5
Casson, A.G.6
Murphy, P.R.7
-
16
-
-
12244275645
-
Widespread occurrence of antisense transcription in the human genome
-
Yelin R, Dahary D, Sorek R, Levanon EY, Goldstein O, Shoshan A, Diber A, Biton S, Tamir Y, Khosravi R, Nemzer S, Pinner E, Walach S, Bernstein J, Savitsky K, Rotman G 2003 Widespread occurrence of antisense transcription in the human genome. Nat Biotechnol 21:379-386
-
(2003)
Nat Biotechnol
, vol.21
, pp. 379-386
-
-
Yelin, R.1
Dahary, D.2
Sorek, R.3
Levanon, E.Y.4
Goldstein, O.5
Shoshan, A.6
Diber, A.7
Biton, S.8
Tamir, Y.9
Khosravi, R.10
Nemzer, S.11
Pinner, E.12
Walach, S.13
Bernstein, J.14
Savitsky, K.15
Rotman, G.16
-
17
-
-
0024424453
-
An antisense mRNA directs the covalent modification of the transcript encoding fibroblast growth factor in Xenopus oocytes
-
Kimelman D, Kirschner MW 1989 An antisense mRNA directs the covalent modification of the transcript encoding fibroblast growth factor in Xenopus oocytes. Cell 59:687-696
-
(1989)
Cell
, vol.59
, pp. 687-696
-
-
Kimelman, D.1
Kirschner, M.W.2
-
18
-
-
0030974120
-
Characterization and tissue-specific expression of the rat basic fibroblast growth factor antisense mRNA and protein
-
Knee R, Li AW, Murphy PR 1997 Characterization and tissue-specific expression of the rat basic fibroblast growth factor antisense mRNA and protein. Proc Natl Acad Sci USA 94:4943-4947
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 4943-4947
-
-
Knee, R.1
Li, A.W.2
Murphy, P.R.3
-
19
-
-
84995857170
-
Identification and characterization of an antisense RNA transcript (gfg) from the human basic fibroblast growth factor gene
-
Murphy PR, Knee RS 1994 Identification and characterization of an antisense RNA transcript (gfg) from the human basic fibroblast growth factor gene. Mol Endocrinol 8:852-859
-
(1994)
Mol Endocrinol
, vol.8
, pp. 852-859
-
-
Murphy, P.R.1
Knee, R.S.2
-
20
-
-
0027267153
-
Expression of alternatively spliced bFGF first coding exons and antisense mRNAs during chicken embryogenesis
-
Zúñ iga Mejía Borja A, Meijers C, Zeller R 1993 Expression of alternatively spliced bFGF first coding exons and antisense mRNAs during chicken embryogenesis. Dev Biol 157:110-118
-
(1993)
Dev Biol
, vol.157
, pp. 110-118
-
-
Zúñ Iga Mejía Borja, A.1
Meijers, C.2
Zeller, R.3
-
21
-
-
0027940243
-
Basic fibroblast growth factor sense (FGF) and antisense (gfg) RNA transcripts are expressed in unfertilized human oocytes and in differentiated adult tissues
-
Knee RS, Pitcher SE, Murphy PR 1994 Basic fibroblast growth factor sense (FGF) and antisense (gfg) RNA transcripts are expressed in unfertilized human oocytes and in differentiated adult tissues. Biochem Biophys Res Commun 205:577-583
-
(1994)
Biochem Biophys Res Commun
, vol.205
, pp. 577-583
-
-
Knee, R.S.1
Pitcher, S.E.2
Murphy, P.R.3
-
22
-
-
0029919678
-
Expression of the rat BFGF antisense RNA transcript is tissue-specific and developmentally regulated
-
Li AW, Seyoum G, Shiu RP, Murphy PR 1996 Expression of the rat BFGF antisense RNA transcript is tissue-specific and developmentally regulated. Mol Cell Endocrinol 118:113-123
-
(1996)
Mol Cell Endocrinol
, vol.118
, pp. 113-123
-
-
Li, A.W.1
Seyoum, G.2
Shiu, R.P.3
Murphy, P.R.4
-
23
-
-
33847308735
-
The fibroblast growth factor-2 antisense gene inhibits nuclear accumulation of FGF-2 and delays cell cycle progression in C6 glioma cells
-
Baguma-Nibasheka M, Li AW, Murphy PR 2007 The fibroblast growth factor-2 antisense gene inhibits nuclear accumulation of FGF-2 and delays cell cycle progression in C6 glioma cells. Mol Cell Endocrinol 267:127-136
-
(2007)
Mol Cell Endocrinol
, vol.267
, pp. 127-136
-
-
Baguma-Nibasheka, M.1
Li, A.W.2
Murphy, P.R.3
-
24
-
-
13844297690
-
Coexpression and regulation of the FGF-2 and FGF antisense genes in leukemic cells
-
Baguma-Nibasheka M, Li AW, Osman MS, Geldenhuys L, Casson AG, Too CK, Murphy PR 2005 Coexpression and regulation of the FGF-2 and FGF antisense genes in leukemic cells. Leuk Res 29:423-433
-
(2005)
Leuk Res
, vol.29
, pp. 423-433
-
-
Baguma-Nibasheka, M.1
Li, A.W.2
Osman, M.S.3
Geldenhuys, L.4
Casson, A.G.5
Too, C.K.6
Murphy, P.R.7
-
25
-
-
0035058293
-
The endogenous fibroblast growth factor-2 antisense gene product regulates pituitary cell growth and hormone production
-
Asa SL, Ramyar L, Murphy PR, Li AW, Ezzat S 2001 The endogenous fibroblast growth factor-2 antisense gene product regulates pituitary cell growth and hormone production. Mol Endocrinol 15:589-599
-
(2001)
Mol Endocrinol
, vol.15
, pp. 589-599
-
-
Asa, S.L.1
Ramyar, L.2
Murphy, P.R.3
Li, A.W.4
Ezzat, S.5
-
26
-
-
0037563969
-
Different basic fibroblast growth factor and fibroblast growth factor-antisense expression in eutopic endometrial stromal cells derived from women with and without endometriosis
-
Mihalich A, Reina M, Mangioni S, Ponti E, Alberti L, Viganò P, Vignali M, Di Blasio AM 2003 Different basic fibroblast growth factor and fibroblast growth factor-antisense expression in eutopic endometrial stromal cells derived from women with and without endometriosis. J Clin Endocrinol Metab 88:2853-2859
-
(2003)
J Clin Endocrinol Metab
, vol.88
, pp. 2853-2859
-
-
Mihalich, A.1
Reina, M.2
Mangioni, S.3
Ponti, E.4
Alberti, L.5
Viganò, P.6
Vignali, M.7
Di Blasio, A.M.8
-
27
-
-
33745080545
-
RNA interference is not involved in natural antisense mediated regulation of gene expression in mammals
-
Faghihi MA, Wahlestedt C 2006 RNA interference is not involved in natural antisense mediated regulation of gene expression in mammals. Genome Biol 7:R38
-
(2006)
Genome Biol
, vol.7
-
-
Faghihi, M.A.1
Wahlestedt, C.2
-
28
-
-
0038005018
-
DAVID: Database for Annotation, Visualization, and Integrated Discovery
-
Dennis Jr G, Sherman BT, Hosack DA, Yang J, Gao W, Lane HC, Lempicki RA 2003 DAVID: Database for Annotation, Visualization, and Integrated Discovery. Genome Biol 4:P3
-
(2003)
Genome Biol
, vol.4
, pp. 3
-
-
Dennis Jr., G.1
Sherman, B.T.2
Hosack, D.A.3
Yang, J.4
Gao, W.5
Lane, H.C.6
Lempicki, R.A.7
-
29
-
-
0344319833
-
Identifying biological themes within lists of genes with EASE
-
Hosack DA, Dennis Jr G, Sherman BT, Lane HC, Lempicki RA 2003 Identifying biological themes within lists of genes with EASE. Genome Biol 4:R70
-
(2003)
Genome Biol
, vol.4
-
-
Hosack, D.A.1
Dennis Jr., G.2
Sherman, B.T.3
Lane, H.C.4
Lempicki, R.A.5
-
30
-
-
32544460452
-
The role of PACT in the RNA silencing pathway
-
Lee Y, Hur I, Park SY, Kim YK, Suh MR, Kim VN 2006 The role of PACT in the RNA silencing pathway. EMBO J 25:522-532
-
(2006)
EMBO J
, vol.25
, pp. 522-532
-
-
Lee, Y.1
Hur, I.2
Park, S.Y.3
Kim, Y.K.4
Suh, M.R.5
Kim, V.N.6
-
31
-
-
3242736704
-
Human Argonaute2 mediates RNA cleavage targeted by miRNAs and siRNAs
-
Meister G, Landthaler M, Patkaniowska A, Dorsett Y, Teng G, Tuschl T 2004 Human Argonaute2 mediates RNA cleavage targeted by miRNAs and siRNAs. Mol Cell 15:185-197
-
(2004)
Mol Cell
, vol.15
, pp. 185-197
-
-
Meister, G.1
Landthaler, M.2
Patkaniowska, A.3
Dorsett, Y.4
Teng, G.5
Tuschl, T.6
-
32
-
-
44149126227
-
A multifunctional human Argonaute2-specific monoclonal antibody
-
Rüdel S, Flatley A, Weinmann L, Kremmer E, Meister G 2008 A multifunctional human Argonaute2-specific monoclonal antibody. RNA 14:1244-1253
-
(2008)
RNA
, vol.14
, pp. 1244-1253
-
-
Rüdel, S.1
Flatley, A.2
Weinmann, L.3
Kremmer, E.4
Meister, G.5
-
33
-
-
19444386412
-
Genome-wide analysis of coordinate expression and evolution of human cis-encoded sense-antisense transcripts
-
Chen J, Sun M, Hurst LD, Carmichael GG, Rowley JD 2005 Genome-wide analysis of coordinate expression and evolution of human cis-encoded sense-antisense transcripts. Trends Genet 21:326-329
-
(2005)
Trends Genet
, vol.21
, pp. 326-329
-
-
Chen, J.1
Sun, M.2
Hurst, L.D.3
Carmichael, G.G.4
Rowley, J.D.5
-
34
-
-
4444376317
-
Over 20% of human transcripts might form sense-antisense pairs
-
Chen J, Sun M, Kent WJ, Huang X, Xie H, Wang W, Zhou G, Shi RZ, Rowley JD 2004 Over 20% of human transcripts might form sense-antisense pairs. Nucleic Acids Res 32:4812-4820
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 4812-4820
-
-
Chen, J.1
Sun, M.2
Kent, W.J.3
Huang, X.4
Xie, H.5
Wang, W.6
Zhou, G.7
Shi, R.Z.8
Rowley, J.D.9
-
35
-
-
33847212142
-
Computational analysis reveals 43% antisense transcription in 1182 transcripts in mouse muscle
-
Györffy A, Tulassay Z, Surowiak P, Györffy B 2006 Computational analysis reveals 43% antisense transcription in 1182 transcripts in mouse muscle. DNA Seq 17:422-430
-
(2006)
DNA Seq
, vol.17
, pp. 422-430
-
-
Györffy, A.1
Tulassay, Z.2
Surowiak, P.3
Györffy, B.4
-
36
-
-
24644472515
-
Antisense transcription in the mammalian transcriptome
-
Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M, Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P, Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J, Mattick J, Hume DA, Lipovich L, Batalov S, Engström PG, Mizuno Y, Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z, Lenhard B, Wahlestedt C 2005 Antisense transcription in the mammalian transcriptome. Science 309:1564-1566
-
(2005)
Science
, vol.309
, pp. 1564-1566
-
-
Katayama, S.1
Tomaru, Y.2
Kasukawa, T.3
Waki, K.4
Nakanishi, M.5
Nakamura, M.6
Nishida, H.7
Yap, C.C.8
Suzuki, M.9
Kawai, J.10
Suzuki, H.11
Carninci, P.12
Hayashizaki, Y.13
Wells, C.14
Frith, M.15
Ravasi, T.16
Pang, K.C.17
Hallinan, J.18
Mattick, J.19
Hume, D.A.20
Lipovich, L.21
Batalov, S.22
Engström, P.G.23
Mizuno, Y.24
Faghihi, M.A.25
Sandelin, A.26
Chalk, A.M.27
Mottagui-Tabar, S.28
Liang, Z.29
Lenhard, B.30
Wahlestedt, C.31
more..
-
37
-
-
0030757318
-
Regulation of gene expression by natural antisense RNA transcripts
-
Knee R, Murphy PR 1997 Regulation of gene expression by natural antisense RNA transcripts. Neurochem Int 31:379-392
-
(1997)
Neurochem Int
, vol.31
, pp. 379-392
-
-
Knee, R.1
Murphy, P.R.2
-
38
-
-
26944454054
-
Evidence for a preferential targeting of 3′-UTRs by cis-encoded natural antisense transcripts
-
Sun M, Hurst LD, Carmichael GG, Chen J 2005 Evidence for a preferential targeting of 3′-UTRs by cis-encoded natural antisense transcripts. Nucleic Acids Res 33:5533-5543
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 5533-5543
-
-
Sun, M.1
Hurst, L.D.2
Carmichael, G.G.3
Chen, J.4
-
39
-
-
33947604744
-
Comparative analysis of cis-encoded antisense RNAs in eukaryotes
-
Numata K, Okada Y, Saito R, Kiyosawa H, Kanai A, Tomita M 2007 Comparative analysis of cis-encoded antisense RNAs in eukaryotes. Gene 392:134-141
-
(2007)
Gene
, vol.392
, pp. 134-141
-
-
Numata, K.1
Okada, Y.2
Saito, R.3
Kiyosawa, H.4
Kanai, A.5
Tomita, M.6
-
40
-
-
11844278458
-
Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets
-
Lewis BP, Burge CB, Bartel DP 2005 Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets. Cell 120:15-20
-
(2005)
Cell
, vol.120
, pp. 15-20
-
-
Lewis, B.P.1
Burge, C.B.2
Bartel, D.P.3
-
41
-
-
0034101197
-
The 3′ untranslated region of messenger RNA: A molecular 'hotspot' for pathology?
-
Conne B, Stutz A, Vassalli JD 2000 The 3′ untranslated region of messenger RNA: A molecular 'hotspot' for pathology? Nat Med 6:637-641
-
(2000)
Nat Med
, vol.6
, pp. 637-641
-
-
Conne, B.1
Stutz, A.2
Vassalli, J.D.3
-
43
-
-
0037130121
-
Natural antisense (rTSα) RNA induces site-specific cleavage of thymidylate synthase mRNA
-
Chu J, Dolnick BJ 2002 Natural antisense (rTSα) RNA induces site-specific cleavage of thymidylate synthase mRNA. Biochim Biophys Acta 1587:183-193
-
(2002)
Biochim Biophys Acta
, vol.1587
, pp. 183-193
-
-
Chu, J.1
Dolnick, B.J.2
-
44
-
-
0030712112
-
Expression of the thyroid hormone receptor gene, erbAα, in B lymphocytes: Alternative mRNA processing is independent of differentiation but correlates with antisense RNA levels
-
Hastings ML, Milcarek C, Martincic K, Peterson ML, Munroe SH 1997 Expression of the thyroid hormone receptor gene, erbAα, in B lymphocytes: alternative mRNA processing is independent of differentiation but correlates with antisense RNA levels. Nucleic Acids Res 25:4296-4300
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4296-4300
-
-
Hastings, M.L.1
Milcarek, C.2
Martincic, K.3
Peterson, M.L.4
Munroe, S.H.5
-
45
-
-
0026659425
-
Sense and antisense TGFβ3 mRNA levels correlate with cardiac valve induction
-
Potts JD, Vincent EB, Runyan RB, Weeks DL 1992 Sense and antisense TGFβ3 mRNA levels correlate with cardiac valve induction. Dev Dyn 193:340-345
-
(1992)
Dev Dyn
, vol.193
, pp. 340-345
-
-
Potts, J.D.1
Vincent, E.B.2
Runyan, R.B.3
Weeks, D.L.4
-
46
-
-
12444287449
-
Diversity of antisense regulation in eukaryotes: Multiple mechanisms, emerging patterns
-
Munroe SH 2004 Diversity of antisense regulation in eukaryotes: multiple mechanisms, emerging patterns. J Cell Biochem 93:664-671
-
(2004)
J Cell Biochem
, vol.93
, pp. 664-671
-
-
Munroe, S.H.1
-
47
-
-
0038581890
-
Transcription of antisense RNA leading to gene silencing and methylation as a novel cause of human genetic disease
-
Tufarelli C, Stanley JA, Garrick D, Sharpe JA, Ayyub H, Wood WG, Higgs DR 2003 Transcription of antisense RNA leading to gene silencing and methylation as a novel cause of human genetic disease. Nat Genet 34:157-165
-
(2003)
Nat Genet
, vol.34
, pp. 157-165
-
-
Tufarelli, C.1
Stanley, J.A.2
Garrick, D.3
Sharpe, J.A.4
Ayyub, H.5
Wood, W.G.6
Higgs, D.R.7
-
48
-
-
0346363764
-
The mouse Murr1 gene is imprinted in the adult brain, presumably due to transcriptional interference by the antisense-oriented U2af1-rs1 gene
-
Wang Y, Joh K, Masuko S, Yatsuki H, Soejima H, Nabetani A, Beechey CV, Okinami S, Mukai T 2004 The mouse Murr1 gene is imprinted in the adult brain, presumably due to transcriptional interference by the antisense-oriented U2af1-rs1 gene. Mol Cell Biol 24:270-279
-
(2004)
Mol Cell Biol
, vol.24
, pp. 270-279
-
-
Wang, Y.1
Joh, K.2
Masuko, S.3
Yatsuki, H.4
Soejima, H.5
Nabetani, A.6
Beechey, C.V.7
Okinami, S.8
Mukai, T.9
-
49
-
-
0035943347
-
The fate of dsRNA in the nucleus: A p54(nrb)-containing complex mediates the nuclear retention of promiscuously A-to-I edited RNAs
-
Zhang Z, Carmichael GG 2001 The fate of dsRNA in the nucleus: a p54(nrb)-containing complex mediates the nuclear retention of promiscuously A-to-I edited RNAs. Cell 106:465-475
-
(2001)
Cell
, vol.106
, pp. 465-475
-
-
Zhang, Z.1
Carmichael, G.G.2
-
50
-
-
0034646647
-
Post-transcriptional regulation of thyroid hormone receptor expression by cis-acting sequences and a naturally occurring antisense RNA
-
Hastings ML, Ingle HA, Lazar MA, Munroe SH 2000 Post-transcriptional regulation of thyroid hormone receptor expression by cis-acting sequences and a naturally occurring antisense RNA. J Biol Chem 275:11507-11513
-
(2000)
J Biol Chem
, vol.275
, pp. 11507-11513
-
-
Hastings, M.L.1
Ingle, H.A.2
Lazar, M.A.3
Munroe, S.H.4
-
51
-
-
27744565709
-
Natural antisense as potential regulator of alternative initiation, splicing and termination
-
Enerly E, Sheng Z, Li KB 2005 Natural antisense as potential regulator of alternative initiation, splicing and termination. In Silico Biol 5:367-377
-
(2005)
In Silico Biol
, vol.5
, pp. 367-377
-
-
Enerly, E.1
Sheng, Z.2
Li, K.B.3
-
52
-
-
4544305449
-
Effects of length and location on the cellular response to double-stranded RNA
-
Wang Q, Carmichael GG 2004 Effects of length and location on the cellular response to double-stranded RNA. Microbiol Mol Biol Rev 68:432-452
-
(2004)
Microbiol Mol Biol Rev
, vol.68
, pp. 432-452
-
-
Wang, Q.1
Carmichael, G.G.2
-
53
-
-
44349104241
-
An endogenous small interfering RNA pathway in Drosophila
-
Czech B, Malone CD, Zhou R, Stark A, Schlingeheyde C, Dus M, Perrimon N, Kellis M, Wohlschlegel JA, Sachidanandam R, Hannon GJ, Brennecke J 2008 An endogenous small interfering RNA pathway in Drosophila. Nature 453:798-802
-
(2008)
Nature
, vol.453
, pp. 798-802
-
-
Czech, B.1
Malone, C.D.2
Zhou, R.3
Stark, A.4
Schlingeheyde, C.5
Dus, M.6
Perrimon, N.7
Kellis, M.8
Wohlschlegel, J.A.9
Sachidanandam, R.10
Hannon, G.J.11
Brennecke, J.12
-
54
-
-
44449096738
-
Endogenous siRNAs derived from transposons and mRNAs in Drosophila somatic cells
-
Ghildiyal M, Seitz H, Horwich MD, Li C, Du T, Lee S, Xu J, Kittler EL, Zapp ML, Weng Z, Zamore PD 2008 Endogenous siRNAs derived from transposons and mRNAs in Drosophila somatic cells. Science 320:1077-1081
-
(2008)
Science
, vol.320
, pp. 1077-1081
-
-
Ghildiyal, M.1
Seitz, H.2
Horwich, M.D.3
Li, C.4
Du, T.5
Lee, S.6
Xu, J.7
Kittler, E.L.8
Zapp, M.L.9
Weng, Z.10
Zamore, P.D.11
-
55
-
-
44349103084
-
Drosophila endogenous small RNAs bind to Argonaute 2 in somatic cells
-
Kawamura Y, Saito K, Kin T, Ono Y, Asai K, Sunohara T, Okada TN, Siomi MC, Siomi H 2008 Drosophila endogenous small RNAs bind to Argonaute 2 in somatic cells. Nature 453:793-797
-
(2008)
Nature
, vol.453
, pp. 793-797
-
-
Kawamura, Y.1
Saito, K.2
Kin, T.3
Ono, Y.4
Asai, K.5
Sunohara, T.6
Okada, T.N.7
Siomi, M.C.8
Siomi, H.9
-
56
-
-
44349101881
-
Two distinct mechanisms generate endogenous siRNAs from bidirectional transcription in Drosophila melanogaster
-
Okamura K, Balla S, Martin R, Liu N, Lai EC 2008 Two distinct mechanisms generate endogenous siRNAs from bidirectional transcription in Drosophila melanogaster. Nat Struct Mol Biol 15:581-590
-
(2008)
Nat Struct Mol Biol
, vol.15
, pp. 581-590
-
-
Okamura, K.1
Balla, S.2
Martin, R.3
Liu, N.4
Lai, E.C.5
-
57
-
-
0037062951
-
RNA interference
-
Hannon GJ 2002 RNA interference. Nature 418:244-251
-
(2002)
Nature
, vol.418
, pp. 244-251
-
-
Hannon, G.J.1
-
58
-
-
0037322606
-
RNAi: Mammalian oocytes do it without RNA-dependent RNA polymerase
-
Stein P, Svoboda P, Anger M, Schultz RM 2003 RNAi: mammalian oocytes do it without RNA-dependent RNA polymerase. RNA 9:187-192
-
(2003)
RNA
, vol.9
, pp. 187-192
-
-
Stein, P.1
Svoboda, P.2
Anger, M.3
Schultz, R.M.4
-
59
-
-
44349130233
-
Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes
-
Watanabe T, Totoki Y, Toyoda A, Kaneda M, Kuramochi- Miyagawa S, Obata Y, Chiba H, Kohara Y, Kono T, Nakano T, Surani MA, Sakaki Y, Sasaki H 2008 Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes. Nature 453:539-543
-
(2008)
Nature
, vol.453
, pp. 539-543
-
-
Watanabe, T.1
Totoki, Y.2
Toyoda, A.3
Kaneda, M.4
Kuramochi- Miyagawa, S.5
Obata, Y.6
Chiba, H.7
Kohara, Y.8
Kono, T.9
Nakano, T.10
Surani, M.A.11
Sakaki, Y.12
Sasaki, H.13
-
60
-
-
0037673656
-
Antisense transcripts with FANTOM2 clone set and their implications for gene regulation
-
Kiyosawa H, Yamanaka I, Osato N, Kondo S, Hayashizaki Y 2003 Antisense transcripts with FANTOM2 clone set and their implications for gene regulation. Genome Res 13:1324-1334
-
(2003)
Genome Res
, vol.13
, pp. 1324-1334
-
-
Kiyosawa, H.1
Yamanaka, I.2
Osato, N.3
Kondo, S.4
Hayashizaki, Y.5
-
61
-
-
29244490062
-
Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis
-
Borsani O, Zhu J, Verslues PE, Sunkar R, Zhu JK 2005 Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis. Cell 123:1279-1291
-
(2005)
Cell
, vol.123
, pp. 1279-1291
-
-
Borsani, O.1
Zhu, J.2
Verslues, P.E.3
Sunkar, R.4
Zhu, J.K.5
-
62
-
-
50149095122
-
Endogenous small interfering RNAs in animals
-
Okamura K, Lai EC 2008 Endogenous small interfering RNAs in animals. Nat Rev Mol Cell Biol 9:673-678
-
(2008)
Nat Rev Mol Cell Biol
, vol.9
, pp. 673-678
-
-
Okamura, K.1
Lai, E.C.2
-
63
-
-
0035997389
-
RNA editing by adenosine deaminases that act on RNA
-
Bass BL 2002 RNA editing by adenosine deaminases that act on RNA. Annu Rev Biochem 71:817-846
-
(2002)
Annu Rev Biochem
, vol.71
, pp. 817-846
-
-
Bass, B.L.1
-
64
-
-
13944265983
-
Vigilins bind to promiscuously A-to-I-edited RNAs and are involved in the formation of heterochromatin
-
Wang Q, Zhang Z, Blackwell K, Carmichael GG 2005 Vigilins bind to promiscuously A-to-I-edited RNAs and are involved in the formation of heterochromatin. Curr Biol 15:384-391
-
(2005)
Curr Biol
, vol.15
, pp. 384-391
-
-
Wang, Q.1
Zhang, Z.2
Blackwell, K.3
Carmichael, G.G.4
-
65
-
-
0344530945
-
Antisense regulation in X inactivation and autosomal imprinting
-
Ogawa Y, Lee JT 2002 Antisense regulation in X inactivation and autosomal imprinting. Cytogenet Genome Res 99:59-65
-
(2002)
Cytogenet Genome Res
, vol.99
, pp. 59-65
-
-
Ogawa, Y.1
Lee, J.T.2
-
66
-
-
23944446057
-
Replication and transcription: Shaping the landscape of the genome
-
Chakalova L, Debrand E, Mitchell JA, Osborne CS, Fraser P 2005 Replication and transcription: shaping the landscape of the genome. Nat Rev Genet 6:669-677
-
(2005)
Nat Rev Genet
, vol.6
, pp. 669-677
-
-
Chakalova, L.1
Debrand, E.2
Mitchell, J.A.3
Osborne, C.S.4
Fraser, P.5
-
67
-
-
0032956724
-
A minor fraction of basic fibroblast growth factor mRNA is deaminated in Xenopus stage VI and matured oocytes
-
Saccomanno L, Bass BL 1999 A minor fraction of basic fibroblast growth factor mRNA is deaminated in Xenopus stage VI and matured oocytes. RNA 5:39-48
-
(1999)
RNA
, vol.5
, pp. 39-48
-
-
Saccomanno, L.1
Bass, B.L.2
-
68
-
-
0031657551
-
How cells respond to interferons
-
Stark GR, Kerr IM, Williams BR, Silverman RH, Schreiber RD 1998 How cells respond to interferons. Annu Rev Biochem 67:227-264
-
(1998)
Annu Rev Biochem
, vol.67
, pp. 227-264
-
-
Stark, G.R.1
Kerr, I.M.2
Williams, B.R.3
Silverman, R.H.4
Schreiber, R.D.5
-
69
-
-
0034769960
-
Viruses and interferons
-
Sen GC 2001 Viruses and interferons. Annu Rev Microbiol 55:255-281
-
(2001)
Annu Rev Microbiol
, vol.55
, pp. 255-281
-
-
Sen, G.C.1
-
70
-
-
0035839592
-
A comprehensive view of regulation of gene expression by double-stranded RNA-mediated cell signaling
-
Geiss G, Jin G, Guo J, Bumgarner R, Katze MG, Sen GC 2001 A comprehensive view of regulation of gene expression by double-stranded RNA-mediated cell signaling. J Biol Chem 276:30178-30182
-
(2001)
J Biol Chem
, vol.276
, pp. 30178-30182
-
-
Geiss, G.1
Jin, G.2
Guo, J.3
Bumgarner, R.4
Katze, M.G.5
Sen, G.C.6
-
71
-
-
47749154078
-
Systematic identification of mRNAs recruited to argonaute 2 by specific microRNAs and corresponding changes in transcript abundance
-
Hendrickson DG, Hogan DJ, Herschlag D, Ferrell JE, Brown PO 2008 Systematic identification of mRNAs recruited to argonaute 2 by specific microRNAs and corresponding changes in transcript abundance. PLoS ONE 3:e2126
-
(2008)
PLoS ONE
, vol.3
-
-
Hendrickson, D.G.1
Hogan, D.J.2
Herschlag, D.3
Ferrell, J.E.4
Brown, P.O.5
-
72
-
-
33750221973
-
Effects of Dicer and Argonaute down-regulation on mRNA levels in human HEK293 cells
-
Schmitter D, Filkowski J, Sewer A, Pillai RS, Oakeley EJ, Zavolan M, Svoboda P, Filipowicz W 2006 Effects of Dicer and Argonaute down-regulation on mRNA levels in human HEK293 cells. Nucleic Acids Res 34:4801-4815
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 4801-4815
-
-
Schmitter, D.1
Filkowski, J.2
Sewer, A.3
Pillai, R.S.4
Oakeley, E.J.5
Zavolan, M.6
Svoboda, P.7
Filipowicz, W.8
-
73
-
-
38549124383
-
The microRNA.org resource: Targets and expression
-
Betel D, Wilson M, Gabow A, Marks DS, Sander C 2008 The microRNA.org resource: targets and expression. Nucleic Acids Res 36:D149-D153
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Betel, D.1
Wilson, M.2
Gabow, A.3
Marks, D.S.4
Sander, C.5
-
74
-
-
33645698822
-
siRNA binding proteins of microglial cells: PKR is an unanticipated ligand
-
Zhang Z, Weinschenk T, Guo K, Schluesener HJ 2006 siRNA binding proteins of microglial cells: PKR is an unanticipated ligand. J Cell Biochem 97:1217-1229
-
(2006)
J Cell Biochem
, vol.97
, pp. 1217-1229
-
-
Zhang, Z.1
Weinschenk, T.2
Guo, K.3
Schluesener, H.J.4
-
75
-
-
34547115237
-
Human TRBP and PACT directly interact with each other and associate with dicer to facilitate the production of small interfering RNA
-
Kok KH, Ng MH, Ching YP, Jin DY 2007 Human TRBP and PACT directly interact with each other and associate with dicer to facilitate the production of small interfering RNA. J Biol Chem 282:17649-17657
-
(2007)
J Biol Chem
, vol.282
, pp. 17649-17657
-
-
Kok, K.H.1
Ng, M.H.2
Ching, Y.P.3
Jin, D.Y.4
-
76
-
-
0028242864
-
TAR RNA-binding protein is an inhibitor of the interferon-induced protein kinase PKR
-
Park H, Davies MV, Langland JO, Chang HW, Nam YS, Tartaglia J, Paoletti E, Jacobs BL, Kaufman RJ, Venkatesan S 1994 TAR RNA-binding protein is an inhibitor of the interferon-induced protein kinase PKR. Proc Natl Acad Sci USA 91:4713-4717
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 4713-4717
-
-
Park, H.1
Davies, M.V.2
Langland, J.O.3
Chang, H.W.4
Nam, Y.S.5
Tartaglia, J.6
Paoletti, E.7
Jacobs, B.L.8
Kaufman, R.J.9
Venkatesan, S.10
-
77
-
-
0032480017
-
PACT, a protein activator of the interferon-induced protein kinase, PKR
-
Patel RC, Sen GC 1998 PACT, a protein activator of the interferon-induced protein kinase, PKR. EMBO J 17:4379-4390
-
(1998)
EMBO J
, vol.17
, pp. 4379-4390
-
-
Patel, R.C.1
Sen, G.C.2
-
78
-
-
0034704473
-
Expression of alternatively spliced FGF-2 antisense RNA transcripts in the central nervous system: Regulation of FGF-2 mRNA translation
-
Li AW, Murphy PR 2000 Expression of alternatively spliced FGF-2 antisense RNA transcripts in the central nervous system: regulation of FGF-2 mRNA translation. Mol Cell Endocrinol 170:233-242
-
(2000)
Mol Cell Endocrinol
, vol.170
, pp. 233-242
-
-
Li, A.W.1
Murphy, P.R.2
-
79
-
-
34248576287
-
RNA helicase a interacts with RISC in human cells and functions in RISC loading
-
Robb GB, Rana TM 2007 RNA helicase A interacts with RISC in human cells and functions in RISC loading. Mol Cell 26:523-537
-
(2007)
Mol Cell
, vol.26
, pp. 523-537
-
-
Robb, G.B.1
Rana, T.M.2
-
80
-
-
33847177628
-
The cellular protein P58IPK regulates influenza virus mRNA translation and replication through a PKR-mediated mechanism
-
Goodman AG, Smith JA, Balachandran S, Perwitasari O, Proll SC, Thomas MJ, Korth MJ, Barber GN, Schiff LA, Katze MG 2007 The cellular protein P58IPK regulates influenza virus mRNA translation and replication through a PKR-mediated mechanism. J Virol 81:2221-2230
-
(2007)
J Virol
, vol.81
, pp. 2221-2230
-
-
Goodman, A.G.1
Smith, J.A.2
Balachandran, S.3
Perwitasari, O.4
Proll, S.C.5
Thomas, M.J.6
Korth, M.J.7
Barber, G.N.8
Schiff, L.A.9
Katze, M.G.10
-
81
-
-
33746369766
-
The p53-induced Wig-1 protein binds double-stranded RNAs with structural characteristics of siRNAs and miRNAs
-
Méndez Vidal C, Prahl M, Wiman KG 2006 The p53-induced Wig-1 protein binds double-stranded RNAs with structural characteristics of siRNAs and miRNAs. FEBS Lett 580:4401-4408
-
(2006)
FEBS Lett
, vol.580
, pp. 4401-4408
-
-
Méndez Vidal, C.1
Prahl, M.2
Wiman, K.G.3
-
82
-
-
44749092093
-
The p53 target protein Wig-1 binds hnRNP A2/B1 and RNA Helicase a via RNA
-
Prahl M, Vilborg A, Palmberg C, Jörnvall H, Asker C, Wiman KG 2008 The p53 target protein Wig-1 binds hnRNP A2/B1 and RNA Helicase A via RNA. FEBS Lett 582:2173-2177
-
(2008)
FEBS Lett
, vol.582
, pp. 2173-2177
-
-
Prahl, M.1
Vilborg, A.2
Palmberg, C.3
Jörnvall, H.4
Asker, C.5
Wiman, K.G.6
-
83
-
-
0036147007
-
Molecular characterization of a mouse cDNA encoding Dicer, a ribonuclease III ortholog involved in RNA interference
-
Nicholson RH, Nicholson AW 2002 Molecular characterization of a mouse cDNA encoding Dicer, a ribonuclease III ortholog involved in RNA interference. Mamm Genome 13:67-73
-
(2002)
Mamm Genome
, vol.13
, pp. 67-73
-
-
Nicholson, R.H.1
Nicholson, A.W.2
-
84
-
-
33745894330
-
Translation repression in human cells by microRNA-induced gene silencing requires RCK/p54
-
Chu CY, Rana TM 2006 Translation repression in human cells by microRNA-induced gene silencing requires RCK/p54. PLoS Biol 4:e210
-
(2006)
PLoS Biol
, vol.4
-
-
Chu, C.Y.1
Rana, T.M.2
-
85
-
-
0029935326
-
A human RNA helicase-like protein, HRH1, facilitates nuclear export of spliced mRNA by releasing the RNA from the spliceosome
-
Ohno M, Shimura Y 1996 A human RNA helicase-like protein, HRH1, facilitates nuclear export of spliced mRNA by releasing the RNA from the spliceosome. Genes Dev 10:997-1007
-
(1996)
Genes Dev
, vol.10
, pp. 997-1007
-
-
Ohno, M.1
Shimura, Y.2
-
86
-
-
33746174302
-
DDX3, a DEAD box RNA helicase with tumor growth-suppressive property and transcriptional regulation activity of the p21waf1/cip1 promoter, is a candidate tumor suppressor
-
Chao CH, Chen CM, Cheng PL, Shih JW, Tsou AP, Lee YH 2006 DDX3, a DEAD box RNA helicase with tumor growth-suppressive property and transcriptional regulation activity of the p21waf1/cip1 promoter, is a candidate tumor suppressor. Cancer Res 66:6579-6588
-
(2006)
Cancer Res
, vol.66
, pp. 6579-6588
-
-
Chao, C.H.1
Chen, C.M.2
Cheng, P.L.3
Shih, J.W.4
Tsou, A.P.5
Lee, Y.H.6
-
87
-
-
38549101945
-
Candidate tumor suppressor DDX3 RNA helicase specifically represses cap-dependent translation by acting as an eIF4E inhibitory protein
-
Shih JW, Tsai TY, Chao CH, Wu Lee YH 2008 Candidate tumor suppressor DDX3 RNA helicase specifically represses cap-dependent translation by acting as an eIF4E inhibitory protein. Oncogene 27:700-714
-
(2008)
Oncogene
, vol.27
, pp. 700-714
-
-
Shih, J.W.1
Tsai, T.Y.2
Chao, C.H.3
Wu Lee, Y.H.4
-
88
-
-
4444368187
-
Argonaute2 is the catalytic engine of mammalian RNAi
-
Liu J, Carmell MA, Rivas FV, Marsden CG, Thomson JM, Song JJ, Hammond SM, Joshua-Tor L, Hannon GJ 2004 Argonaute2 is the catalytic engine of mammalian RNAi. Science 305:1437-1441
-
(2004)
Science
, vol.305
, pp. 1437-1441
-
-
Liu, J.1
Carmell, M.A.2
Rivas, F.V.3
Marsden, C.G.4
Thomson, J.M.5
Song, J.J.6
Hammond, S.M.7
Joshua-Tor, L.8
Hannon, G.J.9
|