-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul S.F., Madden T.L., Schaffer A.A., Zhang J., Zhang Z., Miller W., Lipman D.J. Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res. 1997, 25:3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
4
-
-
0025871313
-
Detection of coliform bacteria and Escherichia coli by multiplex polymerase chain reaction: Comparison with defined substrate and plating methods for water quality monitoring
-
Bej A.K., McCarty S.C., Atlas R.M. Detection of coliform bacteria and Escherichia coli by multiplex polymerase chain reaction: Comparison with defined substrate and plating methods for water quality monitoring. Appl. Environ. Microbiol. 1991, 57:2429-2432.
-
(1991)
Appl. Environ. Microbiol.
, vol.57
, pp. 2429-2432
-
-
Bej, A.K.1
McCarty, S.C.2
Atlas, R.M.3
-
5
-
-
0025139068
-
Detection of coliform bacteria in water by polymerase chain reaction and gene probes
-
Bej A.K., Steffan R.J., DiCesare J., Haff L., Atlas R.M. Detection of coliform bacteria in water by polymerase chain reaction and gene probes. Appl. Environ. Microbiol. 1990, 56:307-314.
-
(1990)
Appl. Environ. Microbiol.
, vol.56
, pp. 307-314
-
-
Bej, A.K.1
Steffan, R.J.2
DiCesare, J.3
Haff, L.4
Atlas, R.M.5
-
6
-
-
34248997162
-
A realtime PCR assay for the detection of Salmonella in a wide variety of food-animal matrices
-
Bohaychuk V.M., Gensler G.E., McFall M.E., King R.K., Render D.G. A realtime PCR assay for the detection of Salmonella in a wide variety of food-animal matrices. J. Food Prot. 2007, 70:1080-1087.
-
(2007)
J. Food Prot.
, vol.70
, pp. 1080-1087
-
-
Bohaychuk, V.M.1
Gensler, G.E.2
McFall, M.E.3
King, R.K.4
Render, D.G.5
-
7
-
-
0026698771
-
Evaluation of the MPN, Anderson-Baird-Parker, Petrifilm E. coli and Fluorocult ECD method for enumeration of Escherichia coli in foods of animal origin
-
Bredie W.L.P., de Boer E. Evaluation of the MPN, Anderson-Baird-Parker, Petrifilm E. coli and Fluorocult ECD method for enumeration of Escherichia coli in foods of animal origin. Food Microbiol. 1992, 161:197-208.
-
(1992)
Food Microbiol.
, vol.161
, pp. 197-208
-
-
Bredie, W.L.P.1
de Boer, E.2
-
8
-
-
66949172169
-
Interlaboratory validation of a real-time PCR 24-hour rapid method for detection of Salmonella in foods
-
Cheng C.-M., Van K.T., Lin W., Ruby R.M. Interlaboratory validation of a real-time PCR 24-hour rapid method for detection of Salmonella in foods. J. Food Prot. 2009, 72:945-951.
-
(2009)
J. Food Prot.
, vol.72
, pp. 945-951
-
-
Cheng, C.-M.1
Van, K.T.2
Lin, W.3
Ruby, R.M.4
-
9
-
-
0042121237
-
Multiple sequence alignment with the Clustal series of programs
-
Chenna R., Sugawara H., Koike T., Lopez R., Gibson T.J., Higgins D.J., Thompson J.D. Multiple sequence alignment with the Clustal series of programs. Nucleic Acids Res. 2003, 31:3497-3500.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3497-3500
-
-
Chenna, R.1
Sugawara, H.2
Koike, T.3
Lopez, R.4
Gibson, T.J.5
Higgins, D.J.6
Thompson, J.D.7
-
10
-
-
0021209585
-
Two plasmid-determined restriction and modification systems in Streptococcus lactis
-
Chopin A., Chopin M.C., Moillo-Batt A., Langella P. Two plasmid-determined restriction and modification systems in Streptococcus lactis. Plasmid 1984, 11:260-263.
-
(1984)
Plasmid
, vol.11
, pp. 260-263
-
-
Chopin, A.1
Chopin, M.C.2
Moillo-Batt, A.3
Langella, P.4
-
11
-
-
0035919839
-
Implication of milk and milk products in food-borne diseases in France and in different industrialized countries
-
De Buyser M.L., Dufour B., Maire M., Lafarge V. Implication of milk and milk products in food-borne diseases in France and in different industrialized countries. Int. J. Food Microbiol. 2001, 67:1-17.
-
(2001)
Int. J. Food Microbiol.
, vol.67
, pp. 1-17
-
-
De Buyser, M.L.1
Dufour, B.2
Maire, M.3
Lafarge, V.4
-
12
-
-
0034992487
-
Phylogenetic analyses of Klebsiella species delineate Klebsiella and Raoultella gen. nov., with description of Raoultella ornithinolytica comb. nov., Raoultella terrigena comb. nov. and Raoultella planticola comb. nov
-
Drancourt M., Bollet C., Carta A., Rousselier P. Phylogenetic analyses of Klebsiella species delineate Klebsiella and Raoultella gen. nov., with description of Raoultella ornithinolytica comb. nov., Raoultella terrigena comb. nov. and Raoultella planticola comb. nov. Int. J. Syst. Evol. Microbiol. 2001, 51:925-932.
-
(2001)
Int. J. Syst. Evol. Microbiol.
, vol.51
, pp. 925-932
-
-
Drancourt, M.1
Bollet, C.2
Carta, A.3
Rousselier, P.4
-
13
-
-
44649147619
-
A multiplex RTi-PCR reaction for simultaneous detection of Escherichia coli O157:H7, Salmonella spp. and Staphylococcus aureus on fresh, minimally processed vegetables
-
Elizaquível P., Aznar R. A multiplex RTi-PCR reaction for simultaneous detection of Escherichia coli O157:H7, Salmonella spp. and Staphylococcus aureus on fresh, minimally processed vegetables. Food Microbiol. 2008, 25:705-713.
-
(2008)
Food Microbiol.
, vol.25
, pp. 705-713
-
-
Elizaquível, P.1
Aznar, R.2
-
14
-
-
0031154924
-
Impact of molecular biology on the detection of foodborne pathogens
-
Feng P. Impact of molecular biology on the detection of foodborne pathogens. Mol. Biotechnol. 1997, 7:267-278.
-
(1997)
Mol. Biotechnol.
, vol.7
, pp. 267-278
-
-
Feng, P.1
-
15
-
-
0020324377
-
Fluorogenic assays for immediate confirmation of Escherichia coli
-
Feng P.C.S., Hartman P.A. Fluorogenic assays for immediate confirmation of Escherichia coli. Appl. Environ. Microbiol. 1982, 43:1320-1329.
-
(1982)
Appl. Environ. Microbiol.
, vol.43
, pp. 1320-1329
-
-
Feng, P.C.S.1
Hartman, P.A.2
-
16
-
-
33745084019
-
Application of quantitative real-time PCR with dual-labeled hydrolysis probes to microbial water quality monitoring
-
Foulds I., Guy R.A., Kapoor A., Xiao C., Krull U.J., Horgen P.A. Application of quantitative real-time PCR with dual-labeled hydrolysis probes to microbial water quality monitoring. J. Biomol. Tech. 2002, 13:272-276.
-
(2002)
J. Biomol. Tech.
, vol.13
, pp. 272-276
-
-
Foulds, I.1
Guy, R.A.2
Kapoor, A.3
Xiao, C.4
Krull, U.J.5
Horgen, P.A.6
-
17
-
-
0242425749
-
Duplex real-time SYBR green PCR assays for detection of 17 species of food- or waterborne pathogens in stools
-
Fukushima H., Tsunomori Y., Seki R. Duplex real-time SYBR green PCR assays for detection of 17 species of food- or waterborne pathogens in stools. J. Clin. Microbiol. 2003, 41:5134-5146.
-
(2003)
J. Clin. Microbiol.
, vol.41
, pp. 5134-5146
-
-
Fukushima, H.1
Tsunomori, Y.2
Seki, R.3
-
18
-
-
0035407042
-
Comparison of different approaches to quantify Staphylococcus aureus cells by real-time quantitative PCR and application of this technique for examination of cheese
-
Hein I., Lehner A., Rieck P., Klein K., Brandl E., Wagner M. Comparison of different approaches to quantify Staphylococcus aureus cells by real-time quantitative PCR and application of this technique for examination of cheese. Appl. Environ. Microbiol. 2001, 67:3122-3126.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 3122-3126
-
-
Hein, I.1
Lehner, A.2
Rieck, P.3
Klein, K.4
Brandl, E.5
Wagner, M.6
-
19
-
-
0030054939
-
The polymerase chain reaction: Applications for the detection of foodborne pathogens
-
Hill W.E. The polymerase chain reaction: Applications for the detection of foodborne pathogens. Crit. Rev. Food Sci. Nutr. 1996, 36:123-173.
-
(1996)
Crit. Rev. Food Sci. Nutr.
, vol.36
, pp. 123-173
-
-
Hill, W.E.1
-
20
-
-
33846455789
-
A rapid (one day), sensitive real-time polymerase chain reaction assay for detecting Escherichia coli O157:H7 in ground beef
-
Holicka J., Guy R.A., Kapoor A., Shepherd D., Horgen P.A. A rapid (one day), sensitive real-time polymerase chain reaction assay for detecting Escherichia coli O157:H7 in ground beef. Can. J. Microbiol. 2006, 52:992-998.
-
(2006)
Can. J. Microbiol.
, vol.52
, pp. 992-998
-
-
Holicka, J.1
Guy, R.A.2
Kapoor, A.3
Shepherd, D.4
Horgen, P.A.5
-
21
-
-
0025953959
-
Possible mechanisms underlying the slow lactose fermentation phenotype in Shigella spp
-
Ito H., Kido N., Arakawa Y., Ohta M., Sugiyama T., Kato N. Possible mechanisms underlying the slow lactose fermentation phenotype in Shigella spp. Appl. Environ. Microbiol. 1991, 57:2912-2917.
-
(1991)
Appl. Environ. Microbiol.
, vol.57
, pp. 2912-2917
-
-
Ito, H.1
Kido, N.2
Arakawa, Y.3
Ohta, M.4
Sugiyama, T.5
Kato, N.6
-
22
-
-
0032978821
-
Proviral load determination of different feline immunodeficiency virus isolates using real-time polymerase chain reaction: Influence of mismatches on quantification
-
Klein D., Janda P., Steinborn R., Müller M., Salmons B., Günzburg W.H. Proviral load determination of different feline immunodeficiency virus isolates using real-time polymerase chain reaction: Influence of mismatches on quantification. Electrophoresis 1999, 20:291-299.
-
(1999)
Electrophoresis
, vol.20
, pp. 291-299
-
-
Klein, D.1
Janda, P.2
Steinborn, R.3
Müller, M.4
Salmons, B.5
Günzburg, W.H.6
-
23
-
-
0034770778
-
Advances in the bacteriology of the coliform group: Their suitability as markers of microbial water safety
-
Leclerc H., Mossel D.A.A., Edberg S.C., Struijk C.B. Advances in the bacteriology of the coliform group: Their suitability as markers of microbial water safety. Annu. Rev. Microbiol. 2001, 55:201-234.
-
(2001)
Annu. Rev. Microbiol.
, vol.55
, pp. 201-234
-
-
Leclerc, H.1
Mossel, D.A.A.2
Edberg, S.C.3
Struijk, C.B.4
-
24
-
-
0034873940
-
Salmonella serotype Virchow causing salmonellosis in a Spanish region. Characterization and survey of clones by DNA fingerprinting, phage typing and antimicrobial resistance
-
Martín M.C., González-Hevia M.A., Alvarez-Riesgo J.A., Mendoza M.C. Salmonella serotype Virchow causing salmonellosis in a Spanish region. Characterization and survey of clones by DNA fingerprinting, phage typing and antimicrobial resistance. Eur. J. Epidemiol. 2001, 17:31-40.
-
(2001)
Eur. J. Epidemiol.
, vol.17
, pp. 31-40
-
-
Martín, M.C.1
González-Hevia, M.A.2
Alvarez-Riesgo, J.A.3
Mendoza, M.C.4
-
25
-
-
3142581367
-
Trouble-shooting sources and causes of high bacteria counts in raw milk
-
Murphy S.C., Boor K.J. Trouble-shooting sources and causes of high bacteria counts in raw milk. Dairy Food Environ. Sanit. 2000, 20:606-611.
-
(2000)
Dairy Food Environ. Sanit.
, vol.20
, pp. 606-611
-
-
Murphy, S.C.1
Boor, K.J.2
-
26
-
-
0034682335
-
Lateral gene transfer and the nature of bacterial innovation
-
Ochman H., Lawrence J.G., Groisman E.A. Lateral gene transfer and the nature of bacterial innovation. Nature 2000, 405:299-304.
-
(2000)
Nature
, vol.405
, pp. 299-304
-
-
Ochman, H.1
Lawrence, J.G.2
Groisman, E.A.3
-
27
-
-
67349286958
-
A new platform for real-time detection of Salmonella spp., Listeria monocytogenes and Escherichia coli O157 in milk
-
Omiccioli E., Amagliani G., Brandi G., Magnani M. A new platform for real-time detection of Salmonella spp., Listeria monocytogenes and Escherichia coli O157 in milk. Food Microbiol. 2009, 26:615-622.
-
(2009)
Food Microbiol.
, vol.26
, pp. 615-622
-
-
Omiccioli, E.1
Amagliani, G.2
Brandi, G.3
Magnani, M.4
-
28
-
-
35448998503
-
A novel real-time PCR-based method for the detection of Listeria monocytogenes in food
-
Oravcová K., Kuchta T., Kaclíková E. A novel real-time PCR-based method for the detection of Listeria monocytogenes in food. Lett. Appl. Microbiol. 2007, 45:568-573.
-
(2007)
Lett. Appl. Microbiol.
, vol.45
, pp. 568-573
-
-
Oravcová, K.1
Kuchta, T.2
Kaclíková, E.3
-
29
-
-
0000257772
-
Shigella Castellani and Chalmers, 1919, 936
-
Williams & Wilkins Co., Baltimore, MD
-
Powe B., Gross R.J. Shigella Castellani and Chalmers, 1919, 936. Bergey's Manual of Systematic Bacteriology 1984, 1:423-427. Williams & Wilkins Co., Baltimore, MD.
-
(1984)
Bergey's Manual of Systematic Bacteriology
, vol.1
, pp. 423-427
-
-
Powe, B.1
Gross, R.J.2
-
30
-
-
17744384345
-
Development of multiplex PCR for detection of total coliform bacteria for Eschericha coli and Clostridium perfringens in drinking water
-
Tantawiwat S., Tansuphasiri U., Wongwit W., Wongchtigul V., Kitayaporn D. Development of multiplex PCR for detection of total coliform bacteria for Eschericha coli and Clostridium perfringens in drinking water. Southeast Asian J. Trop. Med. Public Health 2005, 36:162-169.
-
(2005)
Southeast Asian J. Trop. Med. Public Health
, vol.36
, pp. 162-169
-
-
Tantawiwat, S.1
Tansuphasiri, U.2
Wongwit, W.3
Wongchtigul, V.4
Kitayaporn, D.5
-
31
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson J.D., Higgins D.G., Gibson T.J. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 1994, 22:4673-4680.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
32
-
-
0031665593
-
Multiple analysis of a foodborne outbreak caused by infant formula contaminated by an atypical Salmonella virchow strain
-
Usera M.A., Rodriguez A., Echeita A., Cano R. Multiple analysis of a foodborne outbreak caused by infant formula contaminated by an atypical Salmonella virchow strain. Eur. J. Clin. Microbiol. Infect. Dis. 1998, 17:551-555.
-
(1998)
Eur. J. Clin. Microbiol. Infect. Dis.
, vol.17
, pp. 551-555
-
-
Usera, M.A.1
Rodriguez, A.2
Echeita, A.3
Cano, R.4
-
33
-
-
0242416999
-
Complete genome sequence and comparative genomics of Shigella flexneri serotype 2a strain 2457T
-
Wei J., Goldberg M.B., Burland V., Venkatesan M.M., Deng W., Fournier G., Mayhew G.F., Plunkett G.I.I.I., Rose D.J., Darling A., Mau B., Perna N.T., Payne S.M., Runyen-Janecky L.J., Zhou S., Schwartz D.C., Blattner F.R. Complete genome sequence and comparative genomics of Shigella flexneri serotype 2a strain 2457T. Infect. Immun. 2003, 71:2775-2786.
-
(2003)
Infect. Immun.
, vol.71
, pp. 2775-2786
-
-
Wei, J.1
Goldberg, M.B.2
Burland, V.3
Venkatesan, M.M.4
Deng, W.5
Fournier, G.6
Mayhew, G.F.7
Plunkett, G.I.I.I.8
Rose, D.J.9
Darling, A.10
Mau, B.11
Perna, N.T.12
Payne, S.M.13
Runyen-Janecky, L.J.14
Zhou, S.15
Schwartz, D.C.16
Blattner, F.R.17
-
34
-
-
0037817453
-
Role of nonhost environments in the lifestyles of Salmonella and Escherichia coli
-
Winfield M.D., Groisman E.A. Role of nonhost environments in the lifestyles of Salmonella and Escherichia coli. Appl. Environ. Microbiol. 2003, 69:3687-3694.
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 3687-3694
-
-
Winfield, M.D.1
Groisman, E.A.2
-
35
-
-
28544440091
-
Genome dynamics and diversity of Shigella species, the etiologic agents of bacillary dysentery
-
Yang F., Yang J., Zhang X., Chen L., Jiang Y., Yan Y., Tang X., Wang J., Xiong Z., Dong J., Xue Y., Zhu Y., Xu X., Sun L., Chen S., Nie H., Peng J., Xu J., Wang Y., Yuan Z., Wen Y., Yao Z., Shen Y., Qiang B., Hou Y., Yu J., Jin Q. Genome dynamics and diversity of Shigella species, the etiologic agents of bacillary dysentery. Nucleic Acids Res. 2005, 33:6445-6458.
-
(2005)
Nucleic Acids Res.
, vol.33
, pp. 6445-6458
-
-
Yang, F.1
Yang, J.2
Zhang, X.3
Chen, L.4
Jiang, Y.5
Yan, Y.6
Tang, X.7
Wang, J.8
Xiong, Z.9
Dong, J.10
Xue, Y.11
Zhu, Y.12
Xu, X.13
Sun, L.14
Chen, S.15
Nie, H.16
Peng, J.17
Xu, J.18
Wang, Y.19
Yuan, Z.20
Wen, Y.21
Yao, Z.22
Shen, Y.23
Qiang, B.24
Hou, Y.25
Yu, J.26
Jin, Q.27
more..
|