SCOPUS 정보 검색 플랫폼

Journal of Chemical Physics

Volumn 132, Issue 6, 2010, Pages

Sequence dependent self-assembly of Β -peptides: Insights from a coarse-grained model

(3) Mondal, Jagannath a Sung, Bong June b Yethiraj, Arun a

a UNIVERSITY OF WISCONSIN MADISON (United States)

b Sogang University (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

AMPHIPHILICITY; AMPHIPHILICS; COARSE GRAINED MODELS; DIRECTED SELF-ASSEMBLY; HOLLOW FIBER; INITIAL CONFIGURATION; MONTE CARLO SIMULATION; PHENOMENOLOGICAL MODELS; SEQUENCE-DEPENDENT; SHORT-RANGED INTERACTION;

COMPUTER SIMULATION; GENETIC ALGORITHMS; ISOMERS; MOLECULES; MONTE CARLO METHODS; NANORODS; SELF ASSEMBLY;

PEPTIDES;

PEPTIDE; WATER;

AMINO ACID SEQUENCE; ARTICLE; CHEMICAL STRUCTURE; CHEMISTRY; COMPUTER SIMULATION; ISOMERISM; MONTE CARLO METHOD; PROTEIN SECONDARY STRUCTURE; PROTEIN STABILITY;

AMINO ACID SEQUENCE; COMPUTER SIMULATION; ISOMERISM; MODELS, MOLECULAR; MONTE CARLO METHOD; PEPTIDES; PROTEIN STABILITY; PROTEIN STRUCTURE, SECONDARY; WATER;

EID: 76749131209 PISSN: 00219606 EISSN: None Source Type: Journal
DOI: 10.1063/1.3314309 Document Type: Article

Times cited : (11)

References (19)

1
- 0033577324
- Formation of short, stable helices in aqueous solution by β-amino acid hexamers [2]
- DOI 10.1021/ja983918n
- D. H. Appella, J. J. Barchi, Jr., S. R. Durell, and S. H. Gellman, J. Am. Chem. Soc. 0002-7863 121, 2309 (1999). 10.1021/ja983918n (Pubitemid 29152447)
- (1999) Journal of the American Chemical Society , vol.121 , Issue.10 , pp. 2309-2310
- Appella, D.H.¹ Barchi Jr., J.J.² Durell, S.R.³ Gellman, S.H.⁴

2
- 0037959630
- Environment-independent 14-helix formation in short β-peptides: Striking a balance between shape control and functional diversity
- DOI 10.1021/ja0341485
- T. L. Raguse, J. R. Lai, and S. H. Gellman, J. Am. Chem. Soc. 0002-7863 125, 5592 (2003). 10.1021/ja0341485 (Pubitemid 36592857)
- (2003) Journal of the American Chemical Society , vol.125 , Issue.19 , pp. 5592-5593
- Raguse, T.L.¹ Lai, J.R.² Gellman, S.H.³

3
- 33745957174
- Lyotropic liquid crystals from designed helical β-peptides
- DOI 10.1021/ja062412z
- W. C. Pomerantz, N. L. Abbott, and S. H. Gellman, J. Am. Chem. Soc. 0002-7863 128, 8730 (2006). 10.1021/ja062412z (Pubitemid 44061522)
- (2006) Journal of the American Chemical Society , vol.128 , Issue.27 , pp. 8730-8731
- Pomerantz, W.C.¹ Abbott, N.L.² Gellman, S.H.³

4
- 41249100660
- 1433-7851. 10.1002/anie.200704372
- W. C. Pomerantz, V. M. Yuwono, C. L. Pizzey, J. D. Hartgernik, N. L. Abbott, and S. H. Gellman, Angew. Chem., Int. Ed. 1433-7851 47, 1241 (2008). 10.1002/anie.200704372
- (2008) Angew. Chem., Int. Ed. , vol.47 , pp. 1241
- Pomerantz, W.C.¹ Yuwono, V.M.² Pizzey, C.L.³ Hartgernik, J.D.⁴ Abbott, N.L.⁵ Gellman, S.H.⁶

5
- 0030461803
- β-Peptide foldamers: Robust helix formation in a new family of β-amino acid oligomers
- DOI 10.1021/ja963290l, PII S0002786396032908
- D. H. Appella, L. A. Christianson, I. L. Karle, D. R. Powell, and S. H. Gellman, J. Am. Chem. Soc. 0002-7863 118, 13071 (1996). 10.1021/ja963290l (Pubitemid 27055313)
- (1996) Journal of the American Chemical Society , vol.118 , Issue.51 , pp. 13071-13072
- Appella, D.H.¹ Christianson, L.A.² Karle, I.L.³ Powell, D.R.⁴ Gellman, S.H.⁵

6
- 0033603830
- Synthesis and structural characterization of helix-forming β-peptides: Trans-2-aminocyclopentanecarboxylic acid oligomers
- DOI 10.1021/ja991185g
- D. H. Appella, L. A. Christianson, D. A. Klein, M. R. Richards, D. R. Powell, and S. H. Gellman, J. Am. Chem. Soc. 0002-7863 121, 7574 (1999). 10.1021/ja991185g (Pubitemid 29413718)
- (1999) Journal of the American Chemical Society , vol.121 , Issue.33 , pp. 7574-7581
- Appella, D.H.¹ Christianson, L.A.² Klein, D.A.³ Richards, M.R.⁴ Powell, D.R.⁵ Gellman, S.H.⁶

7
- 51349111182
- 0021-9606. 10.1063/1.2955745
- C. L. Pizzey, W. C. Pomerantz, B. J. Sung, V. M. Yuwono, S. H. Gellman, J. D. Hartgernik, A. Yethiraj, and N. L. Abbott, J. Chem. Phys. 0021-9606 129, 095103 (2008). 10.1063/1.2955745
- (2008) J. Chem. Phys. , vol.129 , pp. 095103
- Pizzey, C.L.¹ Pomerantz, W.C.² Sung, B.J.³ Yuwono, V.M.⁴ Gellman, S.H.⁵ Hartgernik, J.D.⁶ Yethiraj, A.⁷ Abbott, N.L.⁸

8
- 0035471135
- β-peptides: From structure to function
- DOI 10.1021/cr000045i
- R. P. Cheng, S. H. Gellman, and W. F. Degrado, Chem. Rev. 101, 3219 (2001). 10.1021/cr000045i 0009-2665 (Pubitemid 35377819)
- (2001) Chemical Reviews , vol.101 , Issue.10 , pp. 3219-3232
- Cheng, R.P.¹ Gellman, S.H.² DeGrado, W.F.³

9
- 33751206868
- Thermodynamic stability of β-peptide helices and the role of cyclic residues
- DOI 10.1529/biophysj.106.084491
- N. Rathore, S. H. Gellman, and J. J. de Pablo, Biophys. J. 0006-3495 91, 3425 (2006). 10.1529/biophysj.106.084491 (Pubitemid 44788276)
- (2006) Biophysical Journal , vol.91 , Issue.9 , pp. 3425-3435
- Rathore, N.¹ Gellman, S.H.² De Pablo, J.J.³

10
- 36048981812
- 1549-9618. 10.1021/ct600352e
- X. Zhu, A. Yethiraj, and Q. Cui, J. Chem. Theory Comput. 1549-9618 3, 1538 (2007). 10.1021/ct600352e
- (2007) J. Chem. Theory Comput. , vol.3 , pp. 1538
- Zhu, X.¹ Yethiraj, A.² Cui, Q.³

11
- 47149101260
- 1089-5647. 10.1021/jp077601y
- X. Zhu, P. Konig, S. H. Gellman, A. Yethiraj, and Q. Cui, J. Phys. Chem. B 1089-5647 112, 5439 (2008). 10.1021/jp077601y
- (2008) J. Phys. Chem. B , vol.112 , pp. 5439
- Zhu, X.¹ Konig, P.² Gellman, S.H.³ Yethiraj, A.⁴ Cui, Q.⁵

12
- 0032583445
- Theoretical studies of β-peptide models
- DOI 10.1021/ja981939b
- Y. D. Wu and D. P. Wang, J. Am. Chem. Soc. 0002-7863 120, 13485 (1998). 10.1021/ja981939b (Pubitemid 29025215)
- (1998) Journal of the American Chemical Society , vol.120 , Issue.51 , pp. 13485-13493
- Wu, Y.-D.¹ Wang, D.-P.²

13
- 0030800453
- 0947-6539. 10.1002/chem.19970030907
- X. Daura, W. F. van Gunsteren, D. Rigo, B. Jaun, and D. Seebach, Chem.-Eur. J. 0947-6539 3, 1410 (1997). 10.1002/chem.19970030907
- (1997) Chem.-Eur. J. , vol.3 , pp. 1410
- Daura, X.¹ Van Gunsteren, W.F.² Rigo, D.³ Jaun, B.⁴ Seebach, D.⁵

14
- 67650336864
- 1089-5647. 10.1021/jp903341u
- J. Mondal, B. J. Sung, and A. Yethiraj, J. Phys. Chem. B 1089-5647 113, 9379 (2009). 10.1021/jp903341u
- (2009) J. Phys. Chem. B , vol.113 , pp. 9379
- Mondal, J.¹ Sung, B.J.² Yethiraj, A.³

15
- 34548822158
- Sequence dependent behavior of amphiphilic β-peptides on gold surfaces
- DOI 10.1021/cm070265d
- W. C. Pomerantz, K. D. Cadwell, Y. Hsu, S. H. Gellman, and N. L. Abbott, Chem. Mater. 0897-4756 19, 4436 (2007). 10.1021/cm070265d (Pubitemid 47441879)
- (2007) Chemistry of Materials , vol.19 , Issue.18 , pp. 4436-4441
- Pomerantz, W.C.¹ Cadwell, K.D.² Hsu, Y.-J.³ Gellman, S.H.⁴ Abbott, N.L.⁵

16
- 46749104478
- 0021-9606. 10.1063/1.2928700
- C. A. Miller, J. P. Hernandez-Ortiz, N. L. Abbott, S. H. Gellman, and J. J. de Pablo, J. Chem. Phys. 0021-9606 129, 015102 (2008). 10.1063/1.2928700
- (2008) J. Chem. Phys. , vol.129 , pp. 015102
- Miller, C.A.¹ Hernandez-Ortiz, J.P.² Abbott, N.L.³ Gellman, S.H.⁴ De Pablo, J.J.⁵

17
- 38449086990
- Avoiding unphysical kinetic traps in Monte Carlo simulations of strongly attractive particles
- DOI 10.1063/1.2790421
- S. Whitelam and P. L. Geissler, J. Chem. Phys. 0021-9606 127, 154101 (2007). 10.1063/1.2790421 (Pubitemid 351260736)
- (2007) Journal of Chemical Physics , vol.127 , Issue.15 , pp. 154101
- Whitelam, S.¹ Geissler, P.L.²

18
- 1442306896
- 0031-9007. 10.1103/PhysRevLett.92.035504
- J. Liu and E. Luijten, Phys. Rev. Lett. 0031-9007 92, 035504 (2004). 10.1103/PhysRevLett.92.035504
- (2004) Phys. Rev. Lett. , vol.92 , pp. 035504
- Liu, J.¹ Luijten, E.²

19
- 44449101599
- 0009-2614. 10.1016/j.cplett.2008.04.052
- A. Bhattacharyay and A. Troisi, Chem. Phys. Lett. 0009-2614 458, 210 (2008). 10.1016/j.cplett.2008.04.052
- (2008) Chem. Phys. Lett. , vol.458 , pp. 210
- Bhattacharyay, A.¹ Troisi, A.²

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.