-
1
-
-
0036165251
-
Pharmacological inhibitors of mapk pathways
-
English JM, Cobb MH (2002) Pharmacological inhibitors of MAPK pathways. Trends Pharmacol Sci 23:40-45
-
(2002)
Trends Pharmacol Sci
, vol.23
, pp. 40-45
-
-
English, J.M.1
Cobb, M.H.2
-
2
-
-
0032862832
-
Inhibitors of p38 map kinase: Therapeutic intervention in cytokine-mediated diseases
-
Salituro FG, Germann UA, Wilson KP, Bemis GW, Fox T, Su MSS (1999) Inhibitors of p38 MAP kinase: therapeutic intervention in cytokine-mediated diseases. Curr Med Chem 6:807-823
-
(1999)
Curr Med Chem
, vol.6
, pp. 807-823
-
-
Salituro, F.G.1
Germann, U.A.2
Wilson, K.P.3
Bemis, G.W.4
Fox, T.5
Su, M.S.S.6
-
3
-
-
0034513614
-
Potential of p38 inhibitors in the treatment of rheumatoid arthritis
-
Foster ML, Halley F, Souness JE (2000) Potential of p38 inhibitors in the treatment of rheumatoid arthritis. Drug News & Perspect 13:488-497
-
(2000)
Drug News & Perspect
, vol.13
, pp. 488-497
-
-
Foster, M.L.1
Halley, F.2
Souness, J.E.3
-
4
-
-
0142026209
-
P38 map kinases: Key signalling molecules as therapeutic targets for inflammatory diseases
-
Kumar S, Boehm J, Lee JC (2003) p38 map kinases: key signalling molecules as therapeutic targets for inflammatory diseases. Nat Rev Drug Discov 2:717-726
-
(2003)
Nat Rev Drug Discov
, vol.2
, pp. 717-726
-
-
Kumar, S.1
Boehm, J.2
Lee, J.C.3
-
5
-
-
3342918498
-
The p38 map kinase pathway as a therapeutic target in inflammatory disease
-
Saklatvala J (2004) The p38 MAP kinase pathway as a therapeutic target in inflammatory disease. Curr Opin Pharmacol 4:372-377
-
(2004)
Curr Opin Pharmacol
, vol.4
, pp. 372-377
-
-
Saklatvala, J.1
-
6
-
-
0035932519
-
Mechanisms of disease: Cytokine pathways and joint inflammation in rheumatoid arthritis
-
Choy EHS, Panayi GS (2001) Mechanisms of disease: cytokine pathways and joint inflammation in rheumatoid arthritis. N Engl J Med 344:907-916
-
(2001)
N Engl J Med
, vol.344
, pp. 907-916
-
-
Ehs, C.1
Panayi, G.S.2
-
7
-
-
0027936755
-
A map kinase targeted by endotoxin and hyperosmolarity in mammalian-cells
-
Han J, Lee JD, Bibbs L, Ulevitch RJ (1994) A map kinase targeted by endotoxin and hyperosmolarity in mammalian-cells. Science 265:808-811
-
(1994)
Science
, vol.265
, pp. 808-811
-
-
Han, J.1
Lee, J.D.2
Bibbs, L.3
Ulevitch, R.J.4
-
8
-
-
0027424403
-
Endotoxin induces rapid protein-tyrosine phosphorylation in 70z/3 cells expressing Cd14
-
Han JH, Lee JD, Tobias PS, Ulevitch RJ (1993) Endotoxin induces rapid protein-tyrosine phosphorylation in 70z/3 cells expressing Cd14. J Biol Chem 268:25009-25014
-
(1993)
J Biol Chem
, vol.268
, pp. 25009-25014
-
-
Han, J.H.1
Lee, J.D.2
Tobias, P.S.3
Ulevitch, R.J.4
-
9
-
-
0029982565
-
Characterization of the structure and function of a new mitogen-activated protein kinase (p38 beta)
-
Jiang Y, Chen CH, Li ZJ, Guo W, Gegner JA, Lin SC, Han JH (1996) Characterization of the structure and function of a new mitogen-activated protein kinase (p38 beta). J Biol Chem 271:17920-17926
-
(1996)
J Biol Chem
, vol.271
, pp. 17920-17926
-
-
Jiang, Y.1
Chen, C.H.2
Li, Z.J.3
Guo, W.4
Gegner, J.A.5
Lin, S.C.6
Han, J.H.7
-
10
-
-
0029911710
-
Erk6, a mitogen-activated protein kinase involved in C2C12 myoblast differentiation
-
Lechner C, Zahalka MA, Giot JF, Moller NPH, Ullrich A (1996) ERK6, a mitogen-activated protein kinase involved in C2C12 myoblast differentiation. Proc Natl Acad Sci USA 93:4355-4359
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 4355-4359
-
-
Lechner, C.1
Zahalka, M.A.2
Giot, J.F.3
Nph, M.4
Ullrich, A.5
-
11
-
-
0030581626
-
The primary structure of p38 gamma: A new member of p38 group of map kinases
-
Li ZJ, Jiang Y, Ulevitch RJ, Han JH (1996) The primary structure of p38 gamma: a new member of p38 group of MAP kinases. Biochem Biophys Res Commun 228:334-340
-
(1996)
Biochem Biophys Res Commun
, vol.228
, pp. 334-340
-
-
Li, Z.J.1
Jiang, Y.2
Ulevitch, R.J.3
Han, J.H.4
-
12
-
-
0032127814
-
Differential activation of stressactivated protein kinase kinases SKK4/MKK7 and SKK1/MKK4 by the mixed-lineage kinase-2 and mitogen-activated protein kinase kinase (MKK) kinase-1
-
Cuenda A, Dorow DS (1998) Differential activation of stressactivated protein kinase kinases SKK4/MKK7 and SKK1/MKK4 by the mixed-lineage kinase-2 and mitogen-activated protein kinase kinase (MKK) kinase-1. Biochem J 333:11-15
-
(1998)
Biochem J
, vol.333
, pp. 11-15
-
-
Cuenda, A.1
Dorow, D.S.2
-
13
-
-
0031587929
-
Novel homologues of csbp/p38 map kinase: Activation, substrate specificity and sensitivity to inhibition by pyridinyl imidazoles
-
Kumar S, McDonnell PC, Gum RJ, Hand AT, Lee JC, Young PR (1997) Novel homologues of CSBP/p38 MAP kinase: activation, substrate specificity and sensitivity to inhibition by pyridinyl imidazoles. Biochem Biophys Res Commun 235:533-538
-
(1997)
Biochem Biophys Res Commun
, vol.235
, pp. 533-538
-
-
Kumar, S.1
McDonnell, P.C.2
Gum, R.J.3
Hand, A.T.4
Lee, J.C.5
Young, P.R.6
-
14
-
-
0030828701
-
Characterization of the structure and function of the fourth member of p38 group mitogen-activated protein kinases, p38 delta
-
Jiang Y, Gram H, Zhao M, New LG, Gu J, Feng LL, DiPadova F, Ulevitch RJ, Han JH (1997) Characterization of the structure and function of the fourth member of p38 group mitogen-activated protein kinases, p38 delta. J Biol Chem 272:30122-30128
-
(1997)
J Biol Chem
, vol.272
, pp. 30122-30128
-
-
Jiang, Y.1
Gram, H.2
Zhao, M.3
New, L.G.4
Gu, J.5
Feng, L.L.6
Dipadova, F.7
Ulevitch, R.J.8
Han, J.H.9
-
15
-
-
0033840329
-
Coordinate activation of endogenous p38 alpha, beta, gamma, and delta by inflammatory stimuli
-
Fearns C, Kline L, Gram H, Di Padova F, Zurini M, Han J, Ulevitch RJ (2000) Coordinate activation of endogenous p38 alpha, beta, gamma, and delta by inflammatory stimuli. J Leukoc Biol 67:705-711
-
(2000)
J Leukoc Biol
, vol.67
, pp. 705-711
-
-
Fearns, C.1
Kline, L.2
Gram, H.3
Di Padova, F.4
Zurini, M.5
Han, J.6
Ulevitch, R.J.7
-
16
-
-
0034610981
-
Deficiency of the stress kinase p38 alpha results in embryonic lethality: Characterization of the kinase dependence of stress responses of enzyme-deficient embryonic stem cells
-
Allen M, Svensson L, Roach M, Hambor J, McNeish J, Gabel CA (2000) Deficiency of the stress kinase p38 alpha results in embryonic lethality: characterization of the kinase dependence of stress responses of enzyme-deficient embryonic stem cells. J Exp Med 191:859-869
-
(2000)
J Exp Med
, vol.191
, pp. 859-869
-
-
Allen, M.1
Svensson, L.2
Roach, M.3
Hambor, J.4
McNeish, J.5
Gabel, C.A.6
-
17
-
-
0033120590
-
Differential expression and activation of p38 mitogen-activated protein kinase alpha, beta, gamma, and delta in inflammatory cell lineages
-
Hale KK, Trollinger D, Rihanek M, Manthey CL (1999) Differential expression and activation of p38 mitogen-activated protein kinase alpha, beta, gamma, and delta in inflammatory cell lineages. J Immunol 162:4246-4252
-
(1999)
J Immunol
, vol.162
, pp. 4246-4252
-
-
Hale, K.K.1
Trollinger, D.2
Rihanek, M.3
Manthey, C.L.4
-
18
-
-
0036719870
-
The non-diaryl heterocycle classes of p38 map kinase inhibitors
-
Cirillo PF, Pargellis C, Regan JT (2002) The non-diaryl heterocycle classes of p38 MAP kinase inhibitors. Curr Top Med Chem 2:1021-1035
-
(2002)
Curr Top Med Chem
, vol.2
, pp. 1021-1035
-
-
Cirillo, P.F.1
Pargellis, C.2
Regan, J.T.3
-
20
-
-
0035226687
-
P38 map kinase: Molecular target for the inhibition of pro-inflammatory cytokines
-
Adams JL, Badger AM, Kumar S, Lee JC (2001) p38 MAP kinase: molecular target for the inhibition of pro-inflammatory cytokines. Prog Med Chem 38:1-60
-
(2001)
Prog Med Chem
, vol.38
, pp. 1-60
-
-
Adams, J.L.1
Badger, A.M.2
Kumar, S.3
Lee, J.C.4
-
21
-
-
0036715931
-
Pyridinylimidazole based p38 map kinase inhibitors
-
Jackson PF, Bullington JL (2002) Pyridinylimidazole based p38 MAP kinase inhibitors. Curr Top Med Chem 2:1011-1020
-
(2002)
Curr Top Med Chem
, vol.2
, pp. 1011-1020
-
-
Jackson, P.F.1
Bullington, J.L.2
-
22
-
-
0034045949
-
Inhibition of p38 map kinase as a therapeutic strategy
-
Lee JC, Kumar S, Griswold DE, Underwood DC, Votta BJ, Adams JL (2000) Inhibition of p38 MAP kinase as a therapeutic strategy. Immunopharmacology 47:185-201
-
(2000)
Immunopharmacology
, vol.47
, pp. 185-201
-
-
Lee, J.C.1
Kumar, S.2
Griswold, D.E.3
Underwood, D.C.4
Votta, B.J.5
Adams, J.L.6
-
23
-
-
9744269944
-
The discovery of orally active triaminotriazine aniline amides as inhibitors of p38 map kinase
-
Leftheris K, Ahmed G, Chan R, Dyckman AJ, Hussain Z, Ho K, Hynes J, Letourneau J, Li W, Lin SQ et al (2004) The discovery of orally active triaminotriazine aniline amides as inhibitors of p38 MAP kinase. J Med Chem 47:6283-6291
-
(2004)
J Med Chem
, vol.47
, pp. 6283-6291
-
-
Leftheris, K.1
Ahmed, G.2
Chan, R.3
Dyckman, A.J.4
Hussain, Z.5
Ho, K.6
Hynes, J.7
Letourneau, J.8
Li, W.9
Lin, S.Q.10
-
24
-
-
19944434344
-
Identification of novel p38 alpha map kinase inhibitors using fragment-based lead generation
-
Gill AL, Frederickson M, Cleasby A, Woodhead SJ, Carr MG, Woodhead AJ, Walker MT, Congreve MS, Devine LA, Tisi D (2005) Identification of novel p38 alpha MAP kinase inhibitors using fragment-based lead generation. J Med Chem 48:414-426
-
(2005)
J Med Chem
, vol.48
, pp. 414-426
-
-
Gill, A.L.1
Frederickson, M.2
Cleasby, A.3
Woodhead, S.J.4
Carr, M.G.5
Woodhead, A.J.6
Walker, M.T.7
Congreve, M.S.8
Devine, L.A.9
Tisi, D.10
-
25
-
-
34548141772
-
Discovery and optimization of p38 inhibitors via computer-assisted drug design
-
Goldberg DR, Hao MH, Qian KC, Swinamer AD, Gao DHA, Xiong Z, Sarko C, Berry A, Lord J, Magolda RL (2007) Discovery and optimization of p38 inhibitors via computer-assisted drug design. J Med Chem 50:4016-4026
-
(2007)
J Med Chem
, vol.50
, pp. 4016-4026
-
-
Goldberg, D.R.1
Hao, M.H.2
Qian, K.C.3
Swinamer, A.D.4
Dha, G.5
Xiong, Z.6
Sarko, C.7
Berry, A.8
Lord, J.9
Magolda, R.L.10
-
26
-
-
37849002831
-
Design, synthesis, and anti-inflammatory properties of orally active 4 (phenylamino)-pyrrolo[2, 1-f][1, 2, 4]triazine p38 alpha mitogenactivated protein kinase inhibitors
-
Hynes J, Dyckman AJ, Lin SQ, Wrobleski ST, Wu H, Gillooly KM, Kanner SB, Lonial H, Loo D, McIntyre KW (2008) Design, synthesis, and anti-inflammatory properties of orally active 4 (phenylamino)-pyrrolo[2, 1-f][1, 2, 4]triazine p38 alpha mitogenactivated protein kinase inhibitors. J Med Chem 51:4-16
-
(2008)
J Med Chem
, vol.51
, pp. 4-16
-
-
Hynes, J.1
Dyckman, A.J.2
Lin, S.Q.3
Wrobleski, S.T.4
Wu, H.5
Gillooly, K.M.6
Kanner, S.B.7
Lonial, H.8
Loo, D.9
McIntyre, K.W.10
-
27
-
-
0037187412
-
Molecular dynamics and free energy analyses of cathepsin dinhibitor interactions: Insight into structure-based ligand design
-
Huo SH, Wang JM, Cieplak P, Kollman PA, Kuntz ID (2002) Molecular dynamics and free energy analyses of cathepsin Dinhibitor interactions: insight into structure-based ligand design. J Med Chem 45:1412-1419
-
(2002)
J Med Chem
, vol.45
, pp. 1412-1419
-
-
Huo, S.H.1
Wang, J.M.2
Cieplak, P.3
Kollman, P.A.4
Kuntz, I.D.5
-
28
-
-
84961980685
-
Binding of a diverse set of ligands to avidin and streptavidin: An accurate quantitative prediction of their relative affinities by a combination of molecular mechanics and continuum solvent models
-
Kuhn B, Kollman PA (2000) Binding of a diverse set of ligands to avidin and streptavidin: an accurate quantitative prediction of their relative affinities by a combination of molecular mechanics and continuum solvent models. J Med Chem 43:3786-3791
-
(2000)
J Med Chem
, vol.43
, pp. 3786-3791
-
-
Kuhn, B.1
Kollman, P.A.2
-
29
-
-
33750467966
-
Ligand affinities predicted with the MM/PBSA method: Dependence on the simulation method and the force field
-
Weis A, Katebzadeh K, Soderhjelm P, Nilsson I, Ryde U (2006) Ligand affinities predicted with the MM/PBSA method: dependence on the simulation method and the force field. J Med Chem 49:6596-6606
-
(2006)
J Med Chem
, vol.49
, pp. 6596-6606
-
-
Weis, A.1
Katebzadeh, K.2
Soderhjelm, P.3
Nilsson, I.4
Ryde, U.5
-
30
-
-
0034811498
-
Use of mmpbsa in reproducing the binding free energies to HIV-1 rt of tibo derivatives and predicting the binding mode to HIV-1 rt of efavirenz by docking and mm-pbsa
-
Wang JM, Morin P, Wang W, Kollman PA (2001) Use of MMPBSA in reproducing the binding free energies to HIV-1 RT of TIBO derivatives and predicting the binding mode to HIV-1 RT of efavirenz by docking and MM-PBSA. J Am Chem Soc 123:5221-5230
-
(2001)
J Am Chem Soc
, vol.123
, pp. 5221-5230
-
-
Wang, J.M.1
Morin, P.2
Wang, W.3
Kollman, P.A.4
-
31
-
-
33645776269
-
Computational analysis and prediction of the binding motif and protein interacting partners of the abl SH3 domain
-
Hou TJ, Chen K, McLaughlin WA, Lu BZ, Wang W (2006) Computational analysis and prediction of the binding motif and protein interacting partners of the Abl SH3 domain. Plos Comput Biol 2:46-55
-
(2006)
Plos Comput Biol
, vol.2
, pp. 46-55
-
-
Hou, T.J.1
Chen, K.2
McLaughlin, W.A.3
Lu, B.Z.4
Wang, W.5
-
32
-
-
0037198807
-
Predictions of binding of a diverse set of ligands to gelatinase-a by a combination of molecular dynamics and continuum solvent models
-
Hou TJ, Guo SL, Xu XJ (2002) Predictions of binding of a diverse set of ligands to gelatinase-A by a combination of molecular dynamics and continuum solvent models. J Phys Chem B 106:5527-5535
-
(2002)
J Phys Chem B
, vol.106
, pp. 5527-5535
-
-
Hou, T.J.1
Guo, S.L.2
Xu, X.J.3
-
33
-
-
33947644064
-
Molecular dynamics and free energy studies on the wild-type and double mutant hiv-1 protease complexed with amprenavir and two amprenavir-related inhibitors: Mechanism for binding and drug resistance
-
Hou TJ, Yu R (2007) Molecular dynamics and free energy studies on the wild-type and double mutant HIV-1 protease complexed with amprenavir and two amprenavir-related inhibitors: mechanism for binding and drug resistance. J Med Chem 50:1177-1188
-
(2007)
J Med Chem
, vol.50
, pp. 1177-1188
-
-
Hou, T.J.1
Yu, R.2
-
34
-
-
33748637571
-
Recent advances in free energy calculations with a combination of molecular mechanics and continuum models
-
Wang JM, Hou TJ, Xu XJ (2006) Recent advances in free energy calculations with a combination of molecular mechanics and continuum models. Curr Comput-Aided Drug Des 2:287-306
-
(2006)
Curr Comput-aided Drug des
, vol.2
, pp. 287-306
-
-
Wang, J.M.1
Hou, T.J.2
Xu, X.J.3
-
35
-
-
0034521981
-
Calculating structures and free energies of complex molecules: Combining molecular mechanics and continuum models
-
Kollman PA, Massova I, Reyes C, Kuhn B, Huo SH, Chong L, Lee M, Lee T, Duan Y, Wang W (2000) Calculating structures and free energies of complex molecules: combining molecular mechanics and continuum models. Acc Chem Res 33:889-897
-
(2000)
Acc Chem Res
, vol.33
, pp. 889-897
-
-
Kollman, P.A.1
Massova, I.2
Reyes, C.3
Kuhn, B.4
Huo, S.H.5
Chong, L.6
Lee, M.7
Lee, T.8
Duan, Y.9
Wang, W.10
-
36
-
-
30744471940
-
Prediction of binding affinities between the human amphiphysin-1 SH3 domain and its peptide ligands using homology modeling, molecular dynamics and molecular field analysis
-
Hou TJ, McLaughlin W, Lu B, Chen K, Wang W (2006) Prediction of binding affinities between the human amphiphysin-1 SH3 domain and its peptide ligands using homology modeling, molecular dynamics and molecular field analysis. J Proteome Res 5:32-43
-
(2006)
J Proteome Res
, vol.5
, pp. 32-43
-
-
Hou, T.J.1
McLaughlin, W.2
Lu, B.3
Chen, K.4
Wang, W.5
-
37
-
-
39049111013
-
Characterization of domain-peptide interaction interface: A case study on the amphiphysin-1 SH3 domain
-
Hou TJ, Zhang W, Case DA, Wang W (2008) Characterization of domain-peptide interaction interface: a case study on the amphiphysin-1 SH3 domain. J Mol Biol 376:1201-1214
-
(2008)
J Mol Biol
, vol.376
, pp. 1201-1214
-
-
Hou, T.J.1
Zhang, W.2
Case, D.A.3
Wang, W.4
-
38
-
-
0347602124
-
Converging free energy estimates: MM-PB(GB)SA studies on the protein-protein complex ras-raf
-
Gohlke H, Case DA (2004) Converging free energy estimates: MM-PB(GB)SA studies on the protein-protein complex Ras-Raf. J Comput Chem 25:238-250
-
(2004)
J Comput Chem
, vol.25
, pp. 238-250
-
-
Gohlke, H.1
Case, D.A.2
-
39
-
-
42449147045
-
Evaluating the potency of HIV-1 protease drugs to combat resistance
-
Hou T, McLaughlin WA, Wang W (2008) Evaluating the potency of HIV-1 protease drugs to combat resistance. Proteins 71:1163-1174
-
(2008)
Proteins
, vol.71
, pp. 1163-1174
-
-
Hou, T.1
McLaughlin, W.A.2
Wang, W.3
-
40
-
-
77954563733
-
-
SYBYL molecular simulation package (2004) http://www.sybyl.com
-
(2004)
-
-
-
41
-
-
23444454552
-
The amber biomolecular simulation programs
-
Case DA, Cheatham TE, Darden T, Gohlke H, Luo R, Merz KM, Onufriev A, Simmerling C, Wang B, Woods RJ (2005) The Amber biomolecular simulation programs. J Comput Chem 26:1668-1688
-
(2005)
J Comput Chem
, vol.26
, pp. 1668-1688
-
-
Case, D.A.1
Cheatham, T.E.2
Darden, T.3
Gohlke, H.4
Luo, R.5
Merz, K.M.6
Onufriev, A.7
Simmerling, C.8
Wang, B.9
Woods, R.J.10
-
42
-
-
0242663237
-
A point-charge force field for molecular mechanics simulations of proteins based on condensed-phase quantum mechanical calculations
-
Duan Y, Wu C, Chowdhury S, Lee MC, Xiong GM, Zhang W, Yang R, Cieplak P, Luo R, Lee T (2003) A point-charge force field for molecular mechanics simulations of proteins based on condensed-phase quantum mechanical calculations. J Comput Chem 24:1999-2012
-
(2003)
J Comput Chem
, vol.24
, pp. 1999-2012
-
-
Duan, Y.1
Wu, C.2
Chowdhury, S.3
Lee, M.C.4
Xiong, G.M.5
Zhang, W.6
Yang, R.7
Cieplak, P.8
Luo, R.9
Lee, T.10
-
43
-
-
0038626673
-
-
Gaussian Inc., Wallingford CT
-
Frisch MJ, Trucks GW, Schlegel HB, Scuseria GE, Robb MA, Cheeseman JR, Montgomery JAJ, Vreven T, Kudin KN, Burant JC et al (2004) Gaussian 03. Gaussian Inc., Wallingford CT
-
(2004)
Gaussian 03
-
-
Frisch, M.J.1
Trucks, G.W.2
Schlegel, H.B.3
Scuseria, G.E.4
Robb, M.A.5
Cheeseman, J.R.6
Jaj, M.7
Vreven, T.8
Kudin, K.N.9
Burant, J.C.10
-
44
-
-
3042524904
-
A wellbehaved electrostatic potential based method using charge restraints for deriving atomic charges-the resp model
-
Bayly CI, Cieplak P, Cornell WD, Kollman PA (1993) A wellbehaved electrostatic potential based method using charge restraints for deriving atomic charges-the resp model. J Phys Chem 97:10269-10280
-
(1993)
J Phys Chem
, vol.97
, pp. 10269-10280
-
-
Bayly, C.I.1
Cieplak, P.2
Cornell, W.D.3
Kollman, P.A.4
-
45
-
-
2942532422
-
Development and testing of a general amber force field
-
Wang JM, Wolf RM, Caldwell JW, Kollman PA, Case DA (2004) Development and testing of a general amber force field. J Comput Chem 25:1157-1174
-
(2004)
J Comput Chem
, vol.25
, pp. 1157-1174
-
-
Wang, J.M.1
Wolf, R.M.2
Caldwell, J.W.3
Kollman, P.A.4
Case, D.A.5
-
46
-
-
0004016501
-
Comparison of simple potential functions for simulating liquid water
-
Jorgensen WL, Chandrasekhar J, Madura JD, Impey RW, Kleins ML (1983) Comparison of simple potential functions for simulating liquid water. J Chem Phys 79:926-935
-
(1983)
J Chem Phys
, vol.79
, pp. 926-935
-
-
Jorgensen, W.L.1
Chandrasekhar, J.2
Madura, J.D.3
Impey, R.W.4
Kleins, M.L.5
-
47
-
-
33750587438
-
Molecular-dynamics with coupling to an external bath
-
Berendsen HJC, Postma JPM, Vangunsteren WF, Dinola A, Haak JR (1984) Molecular-dynamics with coupling to an external bath. J Chem Phys 81:3684-3690
-
(1984)
J Chem Phys
, vol.81
, pp. 3684-3690
-
-
Hjc, B.1
Jpm, P.2
Vangunsteren, W.F.3
Dinola, A.4
Haak, J.R.5
-
48
-
-
33646940952
-
Numerical-integration of cartesian equations of motion of a system with constraints-molecular-dynamics of N-alkanes
-
Ryckaert JP, Ciccotti G, Berendsen HJC (1977) Numerical-integration of cartesian equations of motion of a system with constraints-molecular-dynamics of N-alkanes. J Comput Phys 23: 327-341
-
(1977)
J Comput Phys
, vol.23
, pp. 327-341
-
-
Ryckaert, J.P.1
Ciccotti, G.2
Hjc, B.3
-
49
-
-
33846823909
-
Particle mesh ewald: An N LOG(N) method for ewald sums in large systems
-
Darden T, York D, Pedersen L (1993) Particle Mesh Ewald: an N Log(N) method for Ewald sums in large systems. J Chem Phys 98(12):10089
-
(1993)
J Chem Phys
, vol.98
, Issue.12
, pp. 10089
-
-
Darden, T.1
York, D.2
Pedersen, L.3
-
50
-
-
0000408363
-
Approximate atomic surfaces from linear combinations of pairwise overlaps (lcpo)
-
Weiser J, Shenkin PS, Still WC (1999) Approximate atomic surfaces from linear combinations of pairwise overlaps (LCPO). J Comput Chem 20:217-230
-
(1999)
J Comput Chem
, vol.20
, pp. 217-230
-
-
Weiser, J.1
Shenkin, P.S.2
Still, W.C.3
-
51
-
-
1842479952
-
Exploring protein native states and large-scale conformational changes with a modified generalized born model
-
Onufriev A, Bashford D, Case DA (2004) Exploring protein native states and large-scale conformational changes with a modified generalized born model. Proteins 55:383-394
-
(2004)
Proteins
, vol.55
, pp. 383-394
-
-
Onufriev, A.1
Bashford, D.2
Case, D.A.3
|