Fast, background-free, 3D super-resolution optical fluctuation imaging (SOFI)

Proceedings of the National Academy of Sciences of the United States of America

Volumn 106, Issue 52, 2009, Pages 22287-22292

  Dertinger, T ^a   Colyera, R ^a   Iyer, G ^a   Weiss, S ^a,b   Enderlein, J ^c  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

^c UNIVERSITY OF GÖTTINGEN   (Germany)

Author keywords

Cumulants; Fluorescence; Intermittency; Quantum dots; Superresolution microscopy

Indexed keywords

QUANTUM DOT;

ANIMAL CELL; ANIMAL CELL CULTURE; ARTICLE; FIBROBLAST; FLUORESCENCE; IMAGE DISPLAY; IMAGE ENHANCEMENT; IMAGE QUALITY; MICROSCOPE; MICROSCOPY; MICROTUBULE; MOUSE; NONHUMAN; PRIORITY JOURNAL; SUPER RESOLUTION OPTICAL FLUCTUATION IMAGING; THREE DIMENSIONAL IMAGING;

3T3 CELLS; ANIMALS; BIOPHYSICAL PHENOMENA; FIBROBLASTS; FLUORESCENT DYES; IMAGING, THREE-DIMENSIONAL; MICE; MICROSCOPY, FLUORESCENCE; MICROTUBULES; MODELS, THEORETICAL; OPTICAL PHENOMENA; QUANTUM DOTS;

EID: 76049117057     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.0907866106     Document Type: Article

References (32)

1. Abbe E (1873) Conributions to the theory of the microscope and the microscopic perception (translated from German). Arch Mikr Anat 9:413-468.
2. Hell SW, Wichmann J (1994) Breaking the diffraction resolution limit by stimulated emission: Stimulated-emission-depletion fluorescence microscopy. Opt Lett 19:780-782.
3. Hell SW, Kroug M (1995) Ground-state-depletion fluorescence microscopy: A concept for breaking the diffraction resolution limit. Appl Phys B Lasers Optics 60:495-497.
4. Gustafsson MGL (2000) Surpassing the lateral resolution limit by a factor of two using structured illumination microscopy. J Microsc 198:82-87.
5. Heintzmann R, Jovin TM, Cremer C (2002) Saturated patterned excitation microscopy: A concept for optical resolution improvement. J Opt Soc Am A 19:1599-1609.
6. Gustafsson MGL, Agard DA, Sedat JW (1999) (IM)-M-5: 3D wide-field light microscopy with better than 100-nm axial resolution. J Microsc Oxford 195:10-16.
7. Hess ST, Girirajan TPK, Mason MD (2006) Ultra-high-resolution imaging by fluorescence photoactivation localization microscopy. Biophys J 91:4258-4272.
8. Rust MJ, Bates M, ZhuangXW(2006) Subdiffraction-limit imaging by stochastic optical reconstruction microscopy (STORM). Nat Methods 3:793-795.
9. Betzig E, et al. (2006) Imaging intracellular fluorescent proteins at nanometer resolution. Science 313:1642-1645.
10. Folling J, et al. (2008) Fluorescence nanoscopy by ground-state depletion and singlemolecule return. Nat Methods 5:943-945.
11. Heilemann M, et al. (2008) Subdiffraction-resolution fluorescence imaging with conventional fluorescent probes. Angew Chem Int 47:6172-6176.
12. Marriott G, et al. (2008) Optical lock-in detection imaging microscopy for contrastenhanced imaging in living cells. Proc Natl Acad Sci USA 105:17789-17794.
13. Westphal V, et al. (2008) Video-rate far-field optical nanoscopy dissects synaptic vesicle movement. Science 320:246-249.
14. Kner P, et al. (2009) Super-resolution video microscopy of live cells by structured illumination. Nat Methods 6:339-342.
15. Shtengel G, et al. (2009) Interferometric fluorescent super-resolution microscopy resolves 3D cellular ultrastructure. Proc Natl Acad Sci USA 106:3125-3130.
16. Juette MF, et al. (2008) Three-dimensional sub-100-nm resolution fluorescence microscopy of thick samples. Nat Methods 5:527-529.
17. Huang B, Jones SA, Brandenburg B, Zhuang XW (2008) Whole-cell 3D STORM reveals interactions between cellular structures with nanometer-scale resolution. Nat Methods 5:1047-1052.
18. Kuno M, Fromm DP, Hamann HF, Gallagher A, Nesbitt DJ (2001) On/off fluorescence intermittency of single semiconductor quantum dots. J Chem Phys 115:1028-1040.
19. Petersen NO, Hoddelius PL, Wiseman PW, Seger O, Magnusson KE (1993) Quantification of membrane-receptor distributions by image correlation spectrscopy: Concept and application. Biophys J 65:1135-1146.
20. Brown, et al. (2008) Raster image correlation spectroscopy (RICS) for measuring fast protein dynamics and concentrations with a commercial laser scanning confocal microscope. J Microsc 229:78-91.
21. Roth CM, Heinlein PI, Heilemann M, Herten D-P (2007) Imaging diffusion in living cells using time-correlated single-photon counting. Anal Chem 79:7340-7345.
22. Müller JD (2004) Cumulant analysis in fluorescence fluctuation spectroscopy. Biophys J 86:3981-3992.
23. Hebert B, Costantino S, Wiseman PW (2005) Spatiotemporal image correlation spectroscopy (STICS) theory, verification, and application to protein velocity mapping in living CHO cells. Biophys J 88:3601-3614.
24. Lidke KA, Rieger B, Jovin TM, Heintzmann R (2005) Superresolution by localization of quantum dots using blinking statistics. Optics Express 13:7052-7062.
25. Ventalon C, Heintzmann R, Mertz J (2007) Dynamic speckle illumination microscopy with wavelet prefiltering. Optics Lett 32:1417-1419.
26. Ventalon C, Mertz J (2006) Dynamic speckle illumination microscopy with translated versus randomized speckle patterns. Optics Express 14:7198-7209.
27. Ventalon C, Mertz J (2005) Quasi-confocal fluorescence sectioning with dynamic speckle illumination. Optics Lett 30:3350-3352.
28. Qian H (1990) On the statistics of fluorescence correlation spectroscopy. Biophys Chem 38:49-57.
29. KoppelDE(1974) Statistical accuracy in fluorescence correlation spectroscopy. Phys Rev A 10:1938-1945.
30. Kuno M, Fromm DP, Hamann HF, Gallagher A, Nesbitt DJ (2000) Nonexponential "blinking" kinetics of single CdSe quantum dots: A universal power law behavior. J Chem Phys 112:3117-3120.
31. Chung I, Bawendi MG (2004) Relationship between single quantum-dot intermittency and fluorescence intensity decays from collections of dots. Phys Rev B 70:165304.
32. Frantsuzov P, Kuno M, Janko B, Marcus RA (2008) Universal emission intermittency in quantum dots, nanorods, and nanowires. Nat Phys 4:519-522.