-
1
-
-
53249138236
-
Identification of the novel KI polyomavirus in the respiratory tract of an Italian patient
-
Babakir-MinaM, Ciccozzi M, Dimonte S, Farchi F, Valdarchi C, Rezza G, Perno CF, Ciotti M. 2008. Identification of the novel KI polyomavirus in the respiratory tract of an Italian patient. J Med Virol 80:2012-2014.
-
(2008)
J Med Virol
, vol.80
, pp. 2012-2014
-
-
MinaM, B.1
Ciccozzi, M.2
Dimonte, S.3
Farchi, F.4
Valdarchi, C.5
Rezza, G.6
Perno, C.F.7
Ciotti, M.8
-
2
-
-
60049090069
-
Identification of the novel KI polyomavirus in paranasal and lung tissues
-
Babakir-Mina M, Ciccozzi M, Campitelli L, Aquaro S, Lo Coco A, Perno CF, Ciotti M. 2009a. Identification of the novel KI polyomavirus in paranasal and lung tissues. J Med Virol 81:558-561.
-
(2009)
J Med Virol
, vol.81
, pp. 558-561
-
-
Babakir-Mina, M.1
Ciccozzi, M.2
Campitelli, L.3
Aquaro, S.4
Lo Coco, A.5
Perno, C.F.6
Ciotti, M.7
-
3
-
-
68049096755
-
Excretion of the novel polyomaviruses KI and WU in the stool of patients with hematological disorders
-
Babakir-Mina M, Ciccozzi M, Alteri C, Polchi P, Picardi A, Greco F, Lucarelli G, Arcese W, Perno CF, Ciotti M. 2009b. Excretion of the novel polyomaviruses KI and WU in the stool of patients with hematological disorders. J Med Virol 81:1668-1673.
-
(2009)
J Med Virol
, vol.81
, pp. 1668-1673
-
-
Babakir-Mina, M.1
Ciccozzi, M.2
Alteri, C.3
Polchi, P.4
Picardi, A.5
Greco, F.6
Lucarelli, G.7
Arcese, W.8
Perno, C.F.9
Ciotti, M.10
-
4
-
-
58149340602
-
MC polyomavirus is frequently present in Merkel cell carcinoma of European patients
-
Becker JC,HoubenR,Ugurel S, Trefzer U, Pföhler C, SchramaD. 2009. MC polyomavirus is frequently present in Merkel cell carcinoma of European patients. J Invest Dermatol 129:248-250.
-
(2009)
J Invest Dermatol
, vol.129
, pp. 248-250
-
-
Becker, J.C.1
Houben, R.2
Ugurel, S.3
Trefzer, U.4
Pföhler, C.5
Schrama, D.6
-
5
-
-
38749134112
-
Presence of the newly discovered human polyomaviruses KI and WU in Australian patients with acute respiratory tract infection
-
Bialasiewicz S, Whiley DM, Lambert SB, Jacob K, Bletchly C, Wang D, Nissen MD, Sloots TP. 2008. Presence of the newly discovered human polyomaviruses KI and WU in Australian patients with acute respiratory tract infection. J Clin Virol 41:63-68.
-
(2008)
J Clin Virol
, vol.41
, pp. 63-68
-
-
Bialasiewicz, S.1
Whiley, D.M.2
Lambert, S.B.3
Jacob, K.4
Bletchly, C.5
Wang, D.6
Nissen, M.D.7
Sloots, T.P.8
-
6
-
-
63849175315
-
Merkel cell polyomavirus DNA in respiratory specimens from children and adults
-
Bialasiewicz S, Lambert SB, Whiley DM, Nissen MD, Sloots TP. 2009. Merkel cell polyomavirus DNA in respiratory specimens from children and adults. Emerg Infect Dis 15:492-494.
-
(2009)
Emerg Infect Dis
, vol.15
, pp. 492-494
-
-
Bialasiewicz, S.1
Lambert, S.B.2
Whiley, D.M.3
Nissen, M.D.4
Sloots, T.P.5
-
7
-
-
59849104443
-
Merkel cell polyomavirus is not detected in prostate cancers, surrounding stroma, or benign prostate controls
-
Bluemn EG, Paulson KG, Higgins EE, Sun Y, Nghiem P, Nelson PS. 2009. Merkel cell polyomavirus is not detected in prostate cancers, surrounding stroma, or benign prostate controls. J Clin Virol 44: 164-166.
-
(2009)
J Clin Virol
, vol.44
, pp. 164-166
-
-
Bluemn, E.G.1
Paulson, K.G.2
Higgins, E.E.3
Sun, Y.4
Nghiem, P.5
Nelson, P.S.6
-
8
-
-
58149331209
-
Getting stronger: The relationship between a newly identified virus and Merkel cell carcinoma
-
LowyDR
-
Buck CB, LowyDR. 2009. Getting stronger: The relationship between a newly identified virus and Merkel cell carcinoma. J Invest Dermatol 129:9-11.
-
(2009)
J Invest Dermatol
, vol.129
, pp. 9-11
-
-
Buck, C.B.1
-
9
-
-
0021278304
-
The primary site of replication alters the eventual site of persistent infection by polyomavirus in mice
-
Dubensky TW, Villarreal LP. 1984. The primary site of replication alters the eventual site of persistent infection by polyomavirus in mice. J Virol 50:541-546.
-
(1984)
J Virol
, vol.50
, pp. 541-546
-
-
Dubensky, T.W.1
Villarreal, L.P.2
-
10
-
-
39749113080
-
Clonal integration of a polyomavirus in human Merkel cell carcinoma
-
Feng H, Shuda M, Chang Y, Moore PS. 2008 Clonal integration of a polyomavirus in human Merkel cell carcinoma. Science 319:1096-1100.
-
(2008)
Science
, vol.319
, pp. 1096-1100
-
-
Feng, H.1
Shuda, M.2
Chang, Y.3
Moore, P.S.4
-
11
-
-
50849118812
-
Merkel cell polyomavirus and Merkel cell carcinoma, France
-
Foulongne V, Kluger N, Dereure O, Brieu N, Guillot B, Segondy M. 2008. Merkel cell polyomavirus and Merkel cell carcinoma, France. Emerg Infect Dis 14:1491-1493.
-
(2008)
Emerg Infect Dis
, vol.14
, pp. 1491-1493
-
-
Foulongne, V.1
Kluger, N.2
Dereure, O.3
Brieu, N.4
Guillot, B.5
Segondy, M.6
-
12
-
-
58149331698
-
Merkel cell polyomavirus is more frequently present inNorth American than Australian Merkel cell carcinoma tumors
-
Garneski KM, Warcola AH, Feng Q,Kiviat NB, Leonard JH, Nghiem P. 2009. Merkel cell polyomavirus is more frequently present inNorth American than Australian Merkel cell carcinoma tumors. J Invest Dermatol 129:246-248.
-
(2009)
J Invest Dermatol
, vol.129
, pp. 246-248
-
-
Garneski, K.M.1
Warcola, A.H.2
Feng, Q.3
Kiviat, N.B.4
Leonard, J.H.5
Nghiem, P.6
-
13
-
-
55849084243
-
-
Giraud G, Ramqvist T, Ragnarsson-Olding B, Dalianis T. 2008. DNA from BK virus and JC virus and from KI, WU, and MC polyomaviruses as well as from simian virus 40 is not detected in non-UV-light-associated primary malignantmelanomas of mucous membranes. J Clin Microbiol 46:3595-3598.
-
Giraud G, Ramqvist T, Ragnarsson-Olding B, Dalianis T. 2008. DNA from BK virus and JC virus and from KI, WU, and MC polyomaviruses as well as from simian virus 40 is not detected in non-UV-light-associated primary malignantmelanomas of mucous membranes. J Clin Microbiol 46:3595-3598.
-
-
-
-
15
-
-
75649148928
-
-
Hall TA. 1999. Bioedit: A user-friendly biological sequence alignment, editor and analysis program for Windows 95/98 NT. Nucleic Acids Symp Ser 41:95-98.
-
Hall TA. 1999. Bioedit: A user-friendly biological sequence alignment, editor and analysis program for Windows 95/98 NT. Nucleic Acids Symp Ser 41:95-98.
-
-
-
-
16
-
-
36749064529
-
Polyomaviruses
-
Knipe DM, Griffi DE, Lamb RA, Straus SE, Howley PM, Martin MA, et al, editors, 5th edition. Philadelphia: Lippincott Williams & Wilkins. pp
-
Imperiale MJ, Major EO. 2007. Polyomaviruses. In: Knipe DM, Griffi DE, Lamb RA, Straus SE, Howley PM, Martin MA, et al., editors. Fields virology. Vol. 2. 5th edition. Philadelphia: Lippincott Williams & Wilkins. pp 2268-2282.
-
(2007)
Fields virology
, vol.2
, pp. 2268-2282
-
-
Imperiale, M.J.1
Major, E.O.2
-
17
-
-
48549097605
-
-
Kassem A, Schöpflin A, Diaz C, Weyers W, Stickeler E, WernerM, Zur Hausen A. 2008. Frequent detection of Merkel cell polyomavirus in human Merkel cell carcinomas and identification of a unique deletion in the VP1 gene. Cancer Res 68:5009-5013.
-
Kassem A, Schöpflin A, Diaz C, Weyers W, Stickeler E, WernerM, Zur Hausen A. 2008. Frequent detection of Merkel cell polyomavirus in human Merkel cell carcinomas and identification of a unique deletion in the VP1 gene. Cancer Res 68:5009-5013.
-
-
-
-
18
-
-
67349089708
-
Merkel cell polyomavirus sequences are frequently detected in nonmelanoma skin cancer of immunosuppressed patients
-
Kassem A, Technau K, Kurz AK, Pantulu D, Löning M, Kayser G, Stickeler E, Weyers W, Diaz C, Werner M, Nashan D, Zur Hausen A. 2009. Merkel cell polyomavirus sequences are frequently detected in nonmelanoma skin cancer of immunosuppressed patients. Int J Cancer 125:356-361.
-
(2009)
Int J Cancer
, vol.125
, pp. 356-361
-
-
Kassem, A.1
Technau, K.2
Kurz, A.K.3
Pantulu, D.4
Löning, M.5
Kayser, G.6
Stickeler, E.7
Weyers, W.8
Diaz, C.9
Werner, M.10
Nashan, D.11
Zur Hausen, A.12
-
19
-
-
63449123993
-
-
Kean JM, Rao S, Wang M, Garcea RL. 2009. Seroepidemiology of human polyomaviruses. PLoS Pathogens 5:e1000363.
-
Kean JM, Rao S, Wang M, Garcea RL. 2009. Seroepidemiology of human polyomaviruses. PLoS Pathogens 5:e1000363.
-
-
-
-
20
-
-
0031972161
-
Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene
-
Nielsen R, Yang Z. 1998. Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene. Genetics 148:929-936.
-
(1998)
Genetics
, vol.148
, pp. 929-936
-
-
Nielsen, R.1
Yang, Z.2
-
21
-
-
0031773680
-
MODELTEST:Testing the model ofDNA substitution
-
Posada D, Crandall KA. 1998.MODELTEST:Testing the model ofDNA substitution. Bioinformatics 14:817-818.
-
(1998)
Bioinformatics
, vol.14
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
23
-
-
58149356756
-
The presence of polyomavirus in nonmelanoma skin cancer in organ transplant recipients is rare
-
Ridd K, Yu S, Bastian BC. 2009. The presence of polyomavirus in nonmelanoma skin cancer in organ transplant recipients is rare. J Invest Dermatol 129:250-252.
-
(2009)
J Invest Dermatol
, vol.129
, pp. 250-252
-
-
Ridd, K.1
Yu, S.2
Bastian, B.C.3
-
24
-
-
66749188370
-
Merkel cell carcinoma of the skin: Pathological and molecular evidence for a causative role of MCV in oncogenesis
-
Sastre-Garau X, Peter M, Avril MF, Laude H, Couturier J, Rozenberg F, Almeida A, Boitier F, Carlotti A, Couturaud B, Dupin N. 2009. Merkel cell carcinoma of the skin: Pathological and molecular evidence for a causative role of MCV in oncogenesis. J Pathol 218: 48-56.
-
(2009)
J Pathol
, vol.218
, pp. 48-56
-
-
Sastre-Garau, X.1
Peter, M.2
Avril, M.F.3
Laude, H.4
Couturier, J.5
Rozenberg, F.6
Almeida, A.7
Boitier, F.8
Carlotti, A.9
Couturaud, B.10
Dupin, N.11
-
25
-
-
55849098118
-
Tantigen mutations are ahuman tumor-specific signature for Merkel cell polyomavirus
-
ShudaM, FengH, Kwun HJ, Rosen ST, GjoerupO,Moore PS, Chang Y. 2008.Tantigen mutations are ahuman tumor-specific signature for Merkel cell polyomavirus. Proc Natl Acad Sci USA 105:16272-16277.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 16272-16277
-
-
Shuda, M.1
Feng, H.2
Kwun, H.J.3
Rosen, S.T.4
Gjoerup, O.5
Moore, P.S.6
Chang, Y.7
-
26
-
-
68249146060
-
Human Merkel cell polyomavirus infection I. MCV T antigen expression in Merkel cell carcinoma, lymphoid tissues and lymphoid tumors
-
Shuda M, Arora R, Kwun HJ, Feng H, Sarid R, Fernández-Figueras MT, Tolstov Y, Gjoerup O, Mansukhani MM, Swerdlow SH, Chaudhary PM, Kirkwood JM, Nalesnik MA, Kant JA, Weiss LM, Moore PS, Chang Y. 2009. Human Merkel cell polyomavirus infection I. MCV T antigen expression in Merkel cell carcinoma, lymphoid tissues and lymphoid tumors. Int J Cancer 125:1243-1249.
-
(2009)
Int J Cancer
, vol.125
, pp. 1243-1249
-
-
Shuda, M.1
Arora, R.2
Kwun, H.J.3
Feng, H.4
Sarid, R.5
Fernández-Figueras, M.T.6
Tolstov, Y.7
Gjoerup, O.8
Mansukhani, M.M.9
Swerdlow, S.H.10
Chaudhary, P.M.11
Kirkwood, J.M.12
Nalesnik, M.A.13
Kant, J.A.14
Weiss, L.M.15
Moore, P.S.16
Chang, Y.17
-
27
-
-
0346952694
-
Phylogeny inference based on parsimony and other methods with PAUP
-
Salemi M, Vandamme AM, editors, New York: Cambridge University Press. pp
-
Swofford D, Sullivan J. 2003. Phylogeny inference based on parsimony and other methods with PAUP*. In: Salemi M, Vandamme AM, editors. The phylogenetic handbook - A practical approach to DNA and protein phylogeny. New York: Cambridge University Press. pp 160-206.
-
(2003)
The phylogenetic handbook - A practical approach to DNA and protein phylogeny
, pp. 160-206
-
-
Swofford, D.1
Sullivan, J.2
-
28
-
-
0031574072
-
The CLUSTAL-X Windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson SD, Gibson TJ, Plewniak F, Branmough F, Higgins DG. 1997. The CLUSTAL-X Windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876-4882.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, S.D.1
Gibson, T.J.2
Plewniak, F.3
Branmough, F.4
Higgins, D.G.5
-
29
-
-
63349087105
-
-
Wetzels CT, Hoefnagel JG, Bakkers JM, Dijkman HB, Blokx WA, Melchers WJ. 2009. Ultrastructural proof of polyomavirus in Merkel cell carcinoma tumour cells and its absence in small cell carcinoma of the lung. PLoS One 4:e4958. [Epub March 23, 2009].
-
Wetzels CT, Hoefnagel JG, Bakkers JM, Dijkman HB, Blokx WA, Melchers WJ. 2009. Ultrastructural proof of polyomavirus in Merkel cell carcinoma tumour cells and its absence in small cell carcinoma of the lung. PLoS One 4:e4958. [Epub March 23, 2009].
-
-
-
-
30
-
-
0030683599
-
PAML: A program package for phylogenetic analysis by maximum likelihood
-
Yang Z. 1997. PAML: A program package for phylogenetic analysis by maximum likelihood. Comput Appl Biosci 13:555-556.
-
(1997)
Comput Appl Biosci
, vol.13
, pp. 555-556
-
-
Yang, Z.1
-
31
-
-
0034097381
-
Codon-substitution models for heterogeneous selection pressure at amino acid sites
-
Yang Z, Nielsen R, Goldman N, Pedersen AM. 2000. Codon-substitution models for heterogeneous selection pressure at amino acid sites. Genetics 155:431-449.
-
(2000)
Genetics
, vol.155
, pp. 431-449
-
-
Yang, Z.1
Nielsen, R.2
Goldman, N.3
Pedersen, A.M.4
-
32
-
-
16344378246
-
Bayes empirical Bayes inference of amino acid sites under positive selection
-
Yang Z, Wong WS, Nielsen R. 2005. Bayes empirical Bayes inference of amino acid sites under positive selection. Mol Biol Evol 22:1107-1118.
-
(2005)
Mol Biol Evol
, vol.22
, pp. 1107-1118
-
-
Yang, Z.1
Wong, W.S.2
Nielsen, R.3
|