Identification of the novel KI polyomavirus in paranasal and lung tissues

Journal of Medical Virology

Volumn 81, Issue 3, 2009, Pages 558-561

  Babakir Mina, Muhammed ^a   Ciccozzi, Massimo ^b   Campitelli, Laura ^b   Aquaro, Stefano ^c   Lo Coco, Achille ^d,e   Perno, Carlo Federico ^a,e   Ciotti, Marco ^a  

^a TOR VERGATA UNIVERSITY HOSPITAL   (Italy)

^b ISTITUTO SUPERIORE DI SANITÀ   (Italy)

^c UNIVERSITY OF CALABRIA   (Italy)

^d SPIRITO SANTO HOSPITAL   (Italy)

^e UNIVERSITY OF ROME TOR VERGATA   (Italy)

Author keywords

Human tumors; KIV polyomavirus; Molecular epidemiology

Indexed keywords

PROTEIN VP1; VIRUS DNA;

ADULT; AGED; ARTICLE; BK VIRUS; CARBOXY TERMINAL SEQUENCE; CLINICAL ARTICLE; CONTROLLED STUDY; FEMALE; GENE AMPLIFICATION; GENE SEGREGATION; HUMAN; HUMAN TISSUE; JC VIRUS; KI POLYOMAVIRUS; LUNG BIOPSY; LUNG CANCER; MALE; NUCLEOTIDE SEQUENCE; PHYLOGENY; POLYOMA VIRUS; VIRUS IDENTIFICATION; ADOLESCENT; AUSTRALIA; CLASSIFICATION; CLUSTER ANALYSIS; DNA SEQUENCE; GENETICS; ISOLATION AND PURIFICATION; ITALY; LUNG; MIDDLE AGED; MOLECULAR GENETICS; PARANASAL SINUS; PRESCHOOL CHILD; SWEDEN; VIROLOGY;

BK POLYOMAVIRUS; POLYOMAVIRUS;

ADOLESCENT; ADULT; AGED; AGED, 80 AND OVER; AUSTRALIA; CHILD, PRESCHOOL; CLUSTER ANALYSIS; DNA, VIRAL; FEMALE; HUMANS; ITALY; LUNG; MALE; MIDDLE AGED; MOLECULAR SEQUENCE DATA; PARANASAL SINUSES; PHYLOGENY; POLYOMAVIRUS; SEQUENCE ANALYSIS, DNA; SWEDEN;

EID: 60049090069     PISSN: 01466615     EISSN: 10969071     Source Type: Journal    
DOI: 10.1002/jmv.21417     Document Type: Article

References (25)

1. Allander T, Andreasson K, Gupta S, Bjerkner A, Bogdanovic G, Persson MAA, Dalianis T, Ramqvist T, Andersson B. 2007. Identification of a third human polyomavirus. J Virol 81:4130-4136.
2. Bebakir-Mine M, Ciccozzi M, Dimonte S, Farchi F, Valdarchic C, Rezzo G, Perno CF, Ciotti M. 2008. Identification of the novel KI Polyomavirus in the respiratory tract of an Italian patient. J Med Virol 80:2012-2014.
3. Bialasiewicz S, Whiley DM, Lambert SB, Wang D, Nissen MD, Sloots TP. 2007. A newly reported human polyomavirus, KI virus, is present in the respiratory tract of Australian children. J Clin Virol 40:15-18.
4. Bollag B, Chuke WF, Frisque RJ. 1989. Hybrid genomes of the polyomaviruses JC virus, BK virus, and simian virus 40: Identification of sequences important for efficient transformation. J Virol 63: 863-872.
5. Brown P, Tsai T, Gajdusek DC. 1975. Seroepidemiology of human papovaviruses: Discovery of virgin populations and some unusual patterns of antibody prevalence among remote peoples of the world. Am J Epidemiol 102:331-340.
6. Chen Y, Sharp PM, Fowkes M, Kocher O, Joseph JT, Koralnik IJ. 2004. Analysis of 15 novel full-length BK virus sequences from three individuals: Evidence of a high intra-strain genetic diversity. J Gen Virol 85:2651-2663.
7. Chesters PM, Heritage J, McCance DJ. 1983. Persistence of DNA sequences of BK virus and JC virus in normal human tissues and in diseased tissues. J Infect Dis 147:676-684.
8. Cress WD, Nevins JR. 1996. Use of the E2F transcription factor by DNA tumor virus regulatory proteins. Curr Top Microbiol Immunol 208: 63-78.
9. Gardner SD, Field AM, Coleman DV, Hulme B. 1971. New human papovavirus (BK) isolated from urine after renal transplantation. Lancet 1:1253-1257.
10. Giuliani L, Jaxmar T, Casadio C, Gariglio M, Manna A, D'Antonio D, Syrjanen K, Favalli C, Ciotti M. 2007. Detection of oncogenic viruses (SV40, BKV, JCV, HCMV, HPV) and p53 codon 72 polymorphism in lung carcinoma. Lung Cancer 57:273-281.
11. Giuliani L, Ronci C, Bonifacio D, Di Bonito L, Favalli C, Perno CF, Syrjanen K, Ciotti M. 2008. Detection of oncogenic DNA viruses in colonrectal cancer. Anticancer Res 28:1405-1410.
12. Gordon J, Khalili K. 1998. The human polyomavirus, JCV, and neurological diseases. Int J Mol Med 1:647-655.
13. Hall TA. 1999. Bioedit: A user-friendly biological sequence alignment, editor and analysis program for Windows 95/98 NT. Nucl Acids Symp Ser 41:95-98.
14. Hirsch HH, Steiger J. 2003. Polyomavirus BK. Lancet Infect Dis 3:611-623.
15. Lednicky JA, Stewart AR, Jenkins JJ, Finegold MJ, Butel JS. 1997. SV40 DNA in human osteosarcoma shows sequence variations among T-antigen genes. Int J Cancer 72:791-800.
16. Nickeleit V, Steiger J, Mihatsch MJ. 2002. BK virus infection after kidney transplantation. Graft 5:S46-S57.
17. Norja P, Ubillos I, Templeton K, Simmonds P. 2007. No evidence for an association between infections with WU and KI polyomaviruses and respiratory disease. J Clin Virol 40:307-311.
18. Padgett BL, Walker DL, ZuRhein GM, Eckroade RJ, Dessel BH. 1971. Cultivation of papova-like virus from human brain with progressive multifocal leucoencephalopathy. Lancet 1:1257-1260.
19. Posada D, Crandall KA. 1998. MODELTEST:Testing the model of DNA substitution. Bioinformatics 14:817-818.
20. Sariyer IK, Aken I, Del Valle L, Khalili K, Safek M. 2004. Tumor induction by simian and human polyomaviruses. Cancer Therapy 2:85-98.
21. Sontag E, Fedorov S, Kamibayashi C, Robbins D, Cobb M, Mumby M. 1993. The interaction of SV40 small tumor antigen with protein phosphatase 2A stimulates the map kinase pathway and induces cell proliferation. Cell 75:887-897.
22. Swofford D, Sullivan J. 2003. Phylogeny inference based on parsimony and other methods with PAUP*. In: Salemi M, Vandamme AM, editors. The phylogenetic handbook - A practical approach to DNA and protein phylogeny. New York: Cambridge University Press. pp. 160-206.
23. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. 1994. CLUSTAL-X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876-4882.
24. White MK, Khalili K. 2004. Polyomaviruses and human cancer: Molecular mechanisms underlying patterns of tumorigenesis. Virology 324:1-16.
25. Zheng H, Abdel Aziz HO, Nakanishi Y, Masuda S, Saito H, Tsuneyama K, Takano Y. 2007. Oncogenic role of JC virus in lung cancer. J Pathol 212:306-315.