-
1
-
-
0033617522
-
Notch signaling: Cell fate control and signal integration in development
-
Artavanis-Tsakonas S, Rand MD, Lake RJ (1999) Notch signaling: cell fate control and signal integration in development. Science 284:770-776.
-
(1999)
Science
, vol.284
, pp. 770-776
-
-
Artavanis-Tsakonas, S.1
Rand, M.D.2
Lake, R.J.3
-
2
-
-
34247224342
-
Regulation of lymphocyte development by Notch signaling
-
Tanigaki K, Honjo T (2007) Regulation of lymphocyte development by Notch signaling. Nat Immunol 8: 451-456.
-
(2007)
Nat Immunol
, vol.8
, pp. 451-456
-
-
Tanigaki, K.1
Honjo, T.2
-
3
-
-
0037390535
-
Notch signaling and inherited disease syndromes
-
Gridley T (2003) Notch signaling and inherited disease syndromes. Hum Mol Genet 12:R9-R13.
-
(2003)
Hum Mol Genet
, vol.12
-
-
Gridley, T.1
-
4
-
-
37449010541
-
The multifaceted role of Notch in cardiac development and disease
-
High FA, Epstein JA (2008) The multifaceted role of Notch in cardiac development and disease. Nat Rev Genet 9:49-61.
-
(2008)
Nat Rev Genet
, vol.9
, pp. 49-61
-
-
High, F.A.1
Epstein, J.A.2
-
6
-
-
64249172203
-
The canonical Notch signaling pathway: Unfolding the activation mechanism
-
Kopan R, Ilagan MX (2009) The canonical Notch signaling pathway: unfolding the activation mechanism. Cell 137:216-233.
-
(2009)
Cell
, vol.137
, pp. 216-233
-
-
Kopan, R.1
Ilagan, M.X.2
-
7
-
-
33747623018
-
Notch signalling: A simple pathway becomes complex
-
Bray SJ (2006) Notch signalling: a simple pathway becomes complex. Nat Rev Mol Cell Biol 7:678-689.
-
(2006)
Nat Rev Mol Cell Biol
, vol.7
, pp. 678-689
-
-
Bray, S.J.1
-
8
-
-
0028232358
-
Recognition sequence of a highly conserved DNA binding protein RBP-J kappa
-
Tun T, Hamaguchi Y, Matsunami N, Furukawa T, Honjo T, Kawaichi M (1994) Recognition sequence of a highly conserved DNA binding protein RBP-J kappa. Nucl Acids Res 22:965-971.
-
(1994)
Nucl Acids Res
, vol.22
, pp. 965-971
-
-
Tun, T.1
Hamaguchi, Y.2
Matsunami, N.3
Furukawa, T.4
Honjo, T.5
Kawaichi, M.6
-
9
-
-
23444446753
-
A bacterial onehybrid system for determining the DNA-binding specificity of transcription factors
-
Meng X, Brodsky MH, Wolfe SA (2005) A bacterial onehybrid system for determining the DNA-binding specificity of transcription factors. Nat Biotechnol 23: 988-994.
-
(2005)
Nat Biotechnol
, vol.23
, pp. 988-994
-
-
Meng, X.1
Brodsky, M.H.2
Wolfe, S.A.3
-
10
-
-
0028090045
-
Inhibition of the DNA-binding activity of Drosophila suppressor of hairless and of its human homolog, KBF2/RBP-J kappa, by direct protein-protein interaction with Drosophila hairless
-
Brou C, Logeat F, Lecourtois M, Vandekerckhove J, Kourilsky P, Schweisguth F, Israel A (1994) Inhibition of the DNA-binding activity of Drosophila suppressor of hairless and of its human homolog, KBF2/RBP-J kappa, by direct protein-protein interaction with Drosophila hairless. Genes Dev 8:2491-2503.
-
(1994)
Genes Dev
, vol.8
, pp. 2491-2503
-
-
Brou, C.1
Logeat, F.2
Lecourtois, M.3
Vandekerckhove, J.4
Kourilsky, P.5
Schweisguth, F.6
Israel, A.7
-
11
-
-
0030014642
-
lag-1, a gene required for lin-12 and glp-1 signaling in Caenorhabditis elegans, is homologous to human CBF1 and Drosophila Su(H)
-
Christensen S, Kodoyianni V, Bosenberg M, Friedman L, Kimble J (1996) lag-1, a gene required for lin-12 and glp-1 signaling in Caenorhabditis elegans, is homologous to human CBF1 and Drosophila Su(H). Development 122:1373-1383.
-
(1996)
Development
, vol.122
, pp. 1373-1383
-
-
Christensen, S.1
Kodoyianni, V.2
Bosenberg, M.3
Friedman, L.4
Kimble, J.5
-
12
-
-
0028973380
-
Suppressor of hairless directly activates transcription of enhancer of split complex genes in response to Notch receptor activity
-
Bailey AM, Posakony JW (1995) Suppressor of hairless directly activates transcription of enhancer of split complex genes in response to Notch receptor activity. Genes Dev 9:2609-2622.
-
(1995)
Genes Dev
, vol.9
, pp. 2609-2622
-
-
Bailey, A.M.1
Posakony, J.W.2
-
13
-
-
0442272485
-
Crosstalk between the EGFR and LIN-12/Notch pathways in C. elegans vulval development
-
Yoo AS, Bais C, Greenwald I (2004) Crosstalk between the EGFR and LIN-12/Notch pathways in C. elegans vulval development. Science 303:663-666.
-
(2004)
Science
, vol.303
, pp. 663-666
-
-
Yoo, A.S.1
Bais, C.2
Greenwald, I.3
-
14
-
-
0027358873
-
The Epstein-Barr virus immortalizing protein EBNA-2 is targeted to DNA by a cellular enhancer-binding protein
-
Ling PD, Rawlins DR, Hayward SD (1993) The Epstein-Barr virus immortalizing protein EBNA-2 is targeted to DNA by a cellular enhancer-binding protein. Proc Natl Acad Sci USA 90:9237-9241.
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 9237-9241
-
-
Ling, P.D.1
Rawlins, D.R.2
Hayward, S.D.3
-
15
-
-
0036682519
-
The lytic switch protein of KSHV activates gene expression via functional interaction with RBP-Jkappa (CSL), the target of the Notch signaling pathway
-
Liang Y, Chang J, Lynch SJ, Lukac DM, Ganem D (2002) The lytic switch protein of KSHV activates gene expression via functional interaction with RBP-Jkappa (CSL), the target of the Notch signaling pathway. Genes Dev 16:1977-1989.
-
(2002)
Genes Dev
, vol.16
, pp. 1977-1989
-
-
Liang, Y.1
Chang, J.2
Lynch, S.J.3
Lukac, D.M.4
Ganem, D.5
-
16
-
-
0029085935
-
Signalling downstream of activated mammalian Notch
-
Jarriault S, Brou C, Logeat F, Schroeter EH, Kopan R, Israel A (1995) Signalling downstream of activated mammalian Notch. Nature 377:355-358.
-
(1995)
Nature
, vol.377
, pp. 355-358
-
-
Jarriault, S.1
Brou, C.2
Logeat, F.3
Schroeter, E.H.4
Kopan, R.5
Israel, A.6
-
17
-
-
4644317278
-
Crystal structure of the nuclear effector of Notch signaling, CSL, bound to DNA
-
Kovall RA, Hendrickson WA (2004) Crystal structure of the nuclear effector of Notch signaling, CSL, bound to DNA. EMBO J 23:3441-3451.
-
(2004)
EMBO J
, vol.23
, pp. 3441-3451
-
-
Kovall, R.A.1
Hendrickson, W.A.2
-
18
-
-
33644761961
-
Crystal structure of the CSL-Notch-mastermind ternary complex bound to DNA
-
Wilson JJ, Kovall RA (2006) Crystal structure of the CSL-Notch-mastermind ternary complex bound to DNA. Cell 124:985-996.
-
(2006)
Cell
, vol.124
, pp. 985-996
-
-
Wilson, J.J.1
Kovall, R.A.2
-
19
-
-
33644749306
-
Structural basis for cooperativity in recruitment of MAML coactivators to Notch transcription complexes
-
Nam Y, Sliz P, Song L, Aster JC, Blacklow SC (2006) Structural basis for cooperativity in recruitment of MAML coactivators to Notch transcription complexes. Cell 124:973-983.
-
(2006)
Cell
, vol.124
, pp. 973-983
-
-
Nam, Y.1
Sliz, P.2
Song, L.3
Aster, J.C.4
Blacklow, S.C.5
-
20
-
-
47249090444
-
RAMinduced allostery facilitates assembly of a notch pathway active transcription complex
-
Friedmann DR, Wilson JJ, Kovall RA (2008) RAMinduced allostery facilitates assembly of a notch pathway active transcription complex. J Biol Chem 283: 14781-14791.
-
(2008)
J Biol Chem
, vol.283
, pp. 14781-14791
-
-
Friedmann, D.R.1
Wilson, J.J.2
Kovall, R.A.3
-
21
-
-
33846928274
-
Structures of CSL, Notch and Mastermind proteins: Piecing together an active transcription complex
-
Kovall RA (2007) Structures of CSL, Notch and Mastermind proteins: piecing together an active transcription complex. Curr Opin Struct Biol 17:117-127.
-
(2007)
Curr Opin Struct Biol
, vol.17
, pp. 117-127
-
-
Kovall, R.A.1
-
22
-
-
33847787057
-
Cooperative assembly of higher-order Notch complexes functions as a switch to induce transcription
-
Nam Y, Sliz P, Pear WS, Aster JC, Blacklow SC (2007) Cooperative assembly of higher-order Notch complexes functions as a switch to induce transcription. Proc Natl Acad Sci USA 104:2103-2108.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 2103-2108
-
-
Nam, Y.1
Sliz, P.2
Pear, W.S.3
Aster, J.C.4
Blacklow, S.C.5
-
23
-
-
0029899865
-
Sequence-specific DNAbinding dominated by dehydration
-
Lundback T, Hard T (1996) Sequence-specific DNAbinding dominated by dehydration. Proc Natl Acad Sci USA 93:4754-4759.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 4754-4759
-
-
Lundback, T.1
Hard, T.2
-
24
-
-
0029044394
-
Calorimetric analysis of lambda cI repressor binding to DNA operator sites
-
Merabet E, Ackers GK (1995) Calorimetric analysis of lambda cI repressor binding to DNA operator sites. Biochemistry 34:8554-8563.
-
(1995)
Biochemistry
, vol.34
, pp. 8554-8563
-
-
Merabet, E.1
Ackers, G.K.2
-
25
-
-
0002638463
-
Heat capacity and entropy changes in processes involving proteins
-
Sturtevant JM (1977) Heat capacity and entropy changes in processes involving proteins. Proc Natl Acad Sci USA 74:2236-2240.
-
(1977)
Proc Natl Acad Sci USA
, vol.74
, pp. 2236-2240
-
-
Sturtevant, J.M.1
-
26
-
-
0025906146
-
Contribution to the thermodynamics of protein folding from the reduction in water-accessible nonpolar surface area
-
Livingstone JR, Spolar RS, Record MT, Jr (1991) Contribution to the thermodynamics of protein folding from the reduction in water-accessible nonpolar surface area. Biochemistry 30:4237-4244.
-
(1991)
Biochemistry
, vol.30
, pp. 4237-4244
-
-
Livingstone, J.R.1
Spolar, R.S.2
Record Jr, M.T.3
-
27
-
-
23444450909
-
Coupling of local folding to site-specific binding of proteins to DNA
-
Spolar RS, Record MT, Jr (1994) Coupling of local folding to site-specific binding of proteins to DNA. Science 263:777-784.
-
(1994)
Science
, vol.263
, pp. 777-784
-
-
Spolar, R.S.1
Record Jr, M.T.2
-
28
-
-
0026684671
-
Use of liquid hydrocarbon and amide transfer data to estimate contributions to thermodynamic functions of protein folding from the removal of nonpolar and polar surface from water
-
Spolar RS, Livingstone JR, Record MT, Jr (1993) Use of liquid hydrocarbon and amide transfer data to estimate contributions to thermodynamic functions of protein folding from the removal of nonpolar and polar surface from water. Biochemistry 31:3947-3955.
-
(1993)
Biochemistry
, vol.31
, pp. 3947-3955
-
-
Spolar, R.S.1
Livingstone, J.R.2
Record Jr, M.T.3
-
29
-
-
0027317958
-
Thermodynamics of ligand binding to trp repressor
-
Jin L, Yang J, Carey J (1993) Thermodynamics of ligand binding to trp repressor. Biochemistry 32: 7302-7309.
-
(1993)
Biochemistry
, vol.32
, pp. 7302-7309
-
-
Jin, L.1
Yang, J.2
Carey, J.3
-
31
-
-
0029910822
-
Characterization of a cooperativity domain mutant Lys3 → Ala (K3A) T4 gene 32 protein
-
Villemain JL, Giedroc DP (1996) Characterization of a cooperativity domain mutant Lys3 → Ala (K3A) T4 gene 32 protein. J Biol Chem 271:27623-27629.
-
(1996)
J Biol Chem
, vol.271
, pp. 27623-27629
-
-
Villemain, J.L.1
Giedroc, D.P.2
-
32
-
-
0026498015
-
Thermodynamic stoichiometries of participation of water, cations and anions in specific and non-specific binding of lac repressor to DNA. Possible thermodynamic origins of the "glutamate effect" on protein-DNA interactions
-
Ha JH, Capp MW, Hohenwalter MD, Baskerville M, Record MT, Jr (1992) Thermodynamic stoichiometries of participation of water, cations and anions in specific and non-specific binding of lac repressor to DNA. Possible thermodynamic origins of the "glutamate effect" on protein-DNA interactions. J Mol Biol 228:252-264.
-
(1992)
J Mol Biol
, vol.228
, pp. 252-264
-
-
Ha, J.H.1
Capp, M.W.2
Hohenwalter, M.D.3
Baskerville, M.4
Record Jr, M.T.5
-
33
-
-
0026808625
-
Thermodynamics of ligand-nucleic acid interactions
-
Lohman TM, Mascotti DP (1992) Thermodynamics of ligand-nucleic acid interactions. Methods Enzymol 212: 400-424.
-
(1992)
Methods Enzymol
, vol.212
, pp. 400-424
-
-
Lohman, T.M.1
Mascotti, D.P.2
-
35
-
-
34548232365
-
Inference of macromolecular assemblies from crystalline state
-
Krissinel E, Henrick K (2007) Inference of macromolecular assemblies from crystalline state. J Mol Biol 372: 774-797.
-
(2007)
J Mol Biol
, vol.372
, pp. 774-797
-
-
Krissinel, E.1
Henrick, K.2
-
36
-
-
0030003963
-
Propeller-twisting of base-pairs and the conformational mobility of dinucleotide steps in DNA
-
el Hassan MA, Calladine CR (1996) Propeller-twisting of base-pairs and the conformational mobility of dinucleotide steps in DNA. J Mol Biol 259:95-103.
-
(1996)
J Mol Biol
, vol.259
, pp. 95-103
-
-
el Hassan, M.A.1
Calladine, C.R.2
-
37
-
-
0024398402
-
-
Hamaguchi Y, Matsunami N, Yamamoto Y, Honjo T (1989) Purification and characterization of a protein that binds to the recombination signal sequence of the immunoglobulin J kappa segment. Nucleic Acids Res 17:9015-9026.
-
Hamaguchi Y, Matsunami N, Yamamoto Y, Honjo T (1989) Purification and characterization of a protein that binds to the recombination signal sequence of the immunoglobulin J kappa segment. Nucleic Acids Res 17:9015-9026.
-
-
-
-
38
-
-
34249886282
-
Notch activation stimulates transient and selective binding of Su(H)/CSL to target enhancers
-
Krejci A, Bray S (2007) Notch activation stimulates transient and selective binding of Su(H)/CSL to target enhancers. Genes Dev 21:1322-1327.
-
(2007)
Genes Dev
, vol.21
, pp. 1322-1327
-
-
Krejci, A.1
Bray, S.2
-
39
-
-
38348998670
-
Notch-GATA synergy promotes endoderm-specific expression of ref-1 in C. elegans
-
Neves A, English K, Priess JR (2007) Notch-GATA synergy promotes endoderm-specific expression of ref-1 in C. elegans. Development 134:4459-4468.
-
(2007)
Development
, vol.134
, pp. 4459-4468
-
-
Neves, A.1
English, K.2
Priess, J.R.3
-
40
-
-
0035788107
-
Pushing the boundaries of molecular replacement with maximum likelihood
-
Read RJ (2001) Pushing the boundaries of molecular replacement with maximum likelihood. Acta Cryst D57:1373-1382.
-
(2001)
Acta Cryst
, vol.D57
, pp. 1373-1382
-
-
Read, R.J.1
-
41
-
-
0033896691
-
Maximum-likelihood density modification
-
Terwilliger TC (2000) Maximum-likelihood density modification. Acta Cryst D56:965-972.
-
(2000)
Acta Cryst
, vol.D56
, pp. 965-972
-
-
Terwilliger, T.C.1
-
42
-
-
13244281317
-
Coot: Model-building tools for molecular graphics
-
Emsley P, Cowtan K (2004) Coot: model-building tools for molecular graphics. Acta Cryst D60:2126-2132.
-
(2004)
Acta Cryst
, vol.D60
, pp. 2126-2132
-
-
Emsley, P.1
Cowtan, K.2
-
43
-
-
0035182073
-
Use of TLS parameters to model anisotropic displacements in macromolecular refinement
-
Winn MD, Isupov MN, Murshudov GN (2001) Use of TLS parameters to model anisotropic displacements in macromolecular refinement. Acta Cryst D57:122-133.
-
(2001)
Acta Cryst
, vol.D57
, pp. 122-133
-
-
Winn, M.D.1
Isupov, M.N.2
Murshudov, G.N.3
-
44
-
-
0030924992
-
Refinement of macromolecular structures by the maximumlikelihood method
-
Murshudov GN, Vagin AA, Dodson EJ (1997) Refinement of macromolecular structures by the maximumlikelihood method. Acta Cryst D53:240-255.
-
(1997)
Acta Cryst
, vol.D53
, pp. 240-255
-
-
Murshudov, G.N.1
Vagin, A.A.2
Dodson, E.J.3
-
45
-
-
0027169515
-
Mainchain bond lengths and bond angles in protein structures
-
Laskowski RA, Moss DS, Thornton JM (1993) Mainchain bond lengths and bond angles in protein structures. J Mol Biol 231:1049-1067.
-
(1993)
J Mol Biol
, vol.231
, pp. 1049-1067
-
-
Laskowski, R.A.1
Moss, D.S.2
Thornton, J.M.3
-
46
-
-
34547592557
-
MolProbity: All-atom contacts and structure validation for proteins and nucleic acids
-
Davis IW, Leaver-Fay A, Chen VB, Block JN, Kapral GJ, Wang X, Murray LW, Arendall WB, III, Snoeyink J, Richardson JS, Richardson DC (2007) MolProbity: all-atom contacts and structure validation for proteins and nucleic acids. Nucl Acids Res 35:W375-W383.
-
(2007)
Nucl Acids Res
, vol.35
-
-
Davis, I.W.1
Leaver-Fay, A.2
Chen, V.B.3
Block, J.N.4
Kapral, G.J.5
Wang, X.6
Murray, L.W.7
Arendall III, W.B.8
Snoeyink, J.9
Richardson, J.S.10
Richardson, D.C.11
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