메뉴 건너뛰기




Volumn 183, Issue 3, 2009, Pages 1165-1173

Cross-species RNAi rescue platform in Drosophila melanogaster

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC DNA;

EID: 72449143602     PISSN: 00166731     EISSN: 00166731     Source Type: Journal    
DOI: 10.1534/genetics.109.106567     Document Type: Article
Times cited : (42)

References (36)
  • 1
    • 0030829653 scopus 로고    scopus 로고
    • Targeted integration of DNA using mutant lox sites in embryonic stem cells
    • Araki, K., T. Imaizumi, K. Okuyama, Y. Oike and K. Yamamura, 1997 Targeted integration of DNA using mutant lox sites in embryonic stem cells. J. Biochem. 122: 977-982.
    • (1997) J. Biochem. , vol.122 , pp. 977-982
    • Araki, K.1    Imaizumi, T.2    Okuyama, K.3    Oike, Y.4    Yamamura, K.5
  • 2
    • 33847660443 scopus 로고    scopus 로고
    • An optimized transgenesis system for Drosophila using germ-line-specific phiC31 integrases
    • Bischof, J., R. K. Maeda, M. Hediger, F. Karch and K. Basler, 2007 An optimized transgenesis system for Drosophila using germ-line-specific phiC31 integrases. Proc. Natl. Acad. Sci. USA 104: 3312-3317.
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , pp. 3312-3317
    • Bischof, J.1    Maeda, R.K.2    Hediger, M.3    Karch, F.4    Basler, K.5
  • 3
    • 0027160708 scopus 로고
    • Targeted gene expression as a means of altering cell fates and generating dominant phenotypes
    • Brand, A.H., and N. Perrimon, 1993 Targeted gene expression as a means of altering cell fates and generating dominant phenotypes. Development 118: 401-415.
    • (1993) Development , vol.118 , pp. 401-415
    • Brand, A.H.1    Perrimon, N.2
  • 4
    • 0034612276 scopus 로고    scopus 로고
    • Use of double-stranded RNA interference in Drosophila cell lines to dissect signal transduction pathways
    • Clemens, J. C., C. A. Worby, N. Simonson-Leff, M. Muda, T. Maehama et al., 2000 Use of double-stranded RNA interference in Drosophila cell lines to dissect signal transduction pathways. Proc. Natl. Acad. Sci. USA 97: 6499-6503.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 6499-6503
    • Clemens, J.C.1    Worby, C.A.2    Simonson-Leff, N.3    Muda, M.4    Maehama, T.5
  • 5
    • 34447530305 scopus 로고    scopus 로고
    • A genome-wide transgenic RNAi library for conditional gene inactivation in Drosophila
    • Dietzl, G., D. Chen, F. Schnorrer, K. C. Su, Y. Barinova et al., 2007 A genome-wide transgenic RNAi library for conditional gene inactivation in Drosophila. Nature 448: 151-156.
    • (2007) Nature , vol.448 , pp. 151-156
    • Dietzl, G.1    Chen, D.2    Schnorrer, F.3    Su, K.C.4    Barinova, Y.5
  • 6
    • 0029999211 scopus 로고    scopus 로고
    • Patterning of cells in the Drosophila eye by lozenge, which shares homologous domains with AML1
    • Daga, A., C. A. Karlovich, K. Dumstrei and U. Banerjee, 1996 Patterning of cells in the Drosophila eye by Lozenge, which shares homologous domains with AML1. Genes Dev. 10: 1194-1205. (Pubitemid 26171101)
    • (1996) Genes and Development , vol.10 , Issue.10 , pp. 1194-1205
    • Daga, A.1    Karlovich, C.A.2    Dumstrei, K.3    Banerjee, U.4
  • 7
    • 47149117454 scopus 로고    scopus 로고
    • Evolution of genes and genomes on the Drosophila phylogeny
    • Drosophila 12 Genomes Consortium
    • Drosophila 12 Genomes Consortium, 2007 Evolution of genes and genomes on the Drosophila phylogeny. Nature 450: 203-218.
    • (2007) Nature , vol.450 , pp. 203-218
  • 8
    • 33646187810 scopus 로고    scopus 로고
    • High-throughput RNAi screening in cultured cells: A user's guide
    • Echeverri, C. J., and N. Perrimon, 2006 High-throughput RNAi screening in cultured cells: a user's guide. Nat. Rev. Genet. 7: 373-384.
    • (2006) Nat. Rev. Genet. , vol.7 , pp. 373-384
    • Echeverri, C.J.1    Perrimon, N.2
  • 9
    • 12344288635 scopus 로고    scopus 로고
    • Parallel chemical and genome-wide RNAi screens identify cytokinesis inhibitors and targets
    • Eggert, U. S., A. A. Kiger, C. Richter, Z. E. Perlman, N. Perrimon et al., 2004 Parallel chemical and genome-wide RNAi screens identify cytokinesis inhibitors and targets. PLoS Biol. 2: e379.
    • (2004) PLoS Biol. , vol.2
    • Eggert, U.S.1    Kiger, A.A.2    Richter, C.3    Perlman, Z.E.4    Perrimon, N.5
  • 10
    • 67349226099 scopus 로고    scopus 로고
    • A toolkit for high-throughput, cross-species gene engineering in Drosophila
    • Ejsmont, R.K., M. Sarov, S. Winkler, K. A. Lipinski and P. Tomancak, 2009 A toolkit for high-throughput, cross-species gene engineering in Drosophila. Nat. Methods 6: 435-437.
    • (2009) Nat. Methods , vol.6 , pp. 435-437
    • Ejsmont, R.K.1    Sarov, M.2    Winkler, S.3    Lipinski, K.A.4    Tomancak, P.5
  • 11
    • 13444304173 scopus 로고    scopus 로고
    • Chance caught on the wing: Cis-regulatory evolution and the origin of pigment patterns in Drosophila
    • Gompel, N., B. Prud'homme, P. J. Wittkopp, V. A. Kassner and S. B. Carroll, 2005 Chance caught on the wing: cis-regulatory evolution and the origin of pigment patterns in Drosophila. Nature 433: 481-487.
    • (2005) Nature , vol.433 , pp. 481-487
    • Gompel, N.1    Prud'Homme, B.2    Wittkopp, P.J.3    Kassner, V.A.4    Carroll, S.B.5
  • 12
    • 0021998537 scopus 로고
    • A 43 kilobase cosmid P transposon rescues the fs(1)K10 morphogenetic locus and three adjacent Drosophila developmental mutants
    • Haenlin, M., H. Steller, V. Pirrotta and E. Mohier, 1985 A 43 kilobase cosmid P transposon rescues the fs(1)K10 morphogenetic locus and three adjacent Drosophila developmental mutants. Cell 40: 827-837.
    • (1985) Cell , vol.40 , pp. 827-837
    • Haenlin, M.1    Steller, H.2    Pirrotta, V.3    Mohier, E.4
  • 13
    • 0029583176 scopus 로고
    • Drosophila homologs of baculovirus inhibitor of apoptosis proteins function to block cell death
    • Hay, B. A., D. A. Wassarman and G. M. Rubin, 1995 Drosophila homologs of baculovirus inhibitor of apoptosis proteins function to block cell death. Cell 83: 1253-1262.
    • (1995) Cell , vol.83 , pp. 1253-1262
    • Hay, B.A.1    Wassarman, D.A.2    Rubin, G.M.3
  • 14
    • 0024468746 scopus 로고
    • The Drosophila patched gene encodes a putative membrane protein required for segmental patterning
    • Hooper, J. E., and M. P. Scott, 1989 The Drosophila patched gene encodes a putative membrane protein required for segmental patterning. Cell 59: 751-765.
    • (1989) Cell , vol.59 , pp. 751-765
    • Hooper, J.E.1    Scott, M.P.2
  • 15
    • 3342881896 scopus 로고    scopus 로고
    • Compensatory proliferation induced by cell death in the Drosophila wing disc requires activity of the apical cell death caspase Dronc in a nonapoptotic role
    • Huh, J. R., M. Guo and B. A. Hay, 2004 Compensatory proliferation induced by cell death in the Drosophila wing disc requires activity of the apical cell death caspase Dronc in a nonapoptotic role. Curr. Biol. 14: 1262-1266.
    • (2004) Curr. Biol. , vol.14 , pp. 1262-1266
    • Huh, J.R.1    Guo, M.2    Hay, B.A.3
  • 16
    • 39749184167 scopus 로고    scopus 로고
    • The evolution of gene regulation underlies amorphological difference between two Drosophila sister species
    • Jeong, S., M. Rebeiz, P. Andolfatto, T. Werner, J. True et al., 2008 The evolution of gene regulation underlies amorphological difference between two Drosophila sister species. Cell 132: 783-793.
    • (2008) Cell , vol.132 , pp. 783-793
    • Jeong, S.1    Rebeiz, M.2    Andolfatto, P.3    Werner, T.4    True, J.5
  • 17
    • 14044262340 scopus 로고    scopus 로고
    • RNA interference rescue by bacterial artificial chromosome transgenesis in mammalian tissue culture cells
    • Kittler, R., L. Pelletier, C. Ma, I. Poser, S. Fischer et al., 2005 RNA interference rescue by bacterial artificial chromosome transgenesis in mammalian tissue culture cells. Proc. Natl. Acad. Sci. USA 102: 2396-2401.
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 2396-2401
    • Kittler, R.1    Pelletier, L.2    Ma, C.3    Poser, I.4    Fischer, S.5
  • 18
    • 33749173274 scopus 로고    scopus 로고
    • DRONC coordinates cell death and compensatory proliferation
    • Kondo, S., N. Senoo-Matsuda, Y. Hiromi and M. Miura, 2006 DRONC coordinates cell death and compensatory proliferation. Mol. Cell. Biol. 26: 7258-7268.
    • (2006) Mol. Cell. Biol. , vol.26 , pp. 7258-7268
    • Kondo, S.1    Senoo-Matsuda, N.2    Hiromi, Y.3    Miura, M.4
  • 19
    • 33748994797 scopus 로고    scopus 로고
    • Evidence of off-target effects associated with long dsRNAs in Drosophila melanogaster cell-based assays
    • Kulkarni, M. M., M. Booker, S. J. Silver, A. Friedman, P. Hong et al., 2006 Evidence of off-target effects associated with long dsRNAs in Drosophila melanogaster cell-based assays. Nat. Methods 3: 833-838.
    • (2006) Nat. Methods , vol.3 , pp. 833-838
    • Kulkarni, M.M.1    Booker, M.2    Silver, S.J.3    Friedman, A.4    Hong, P.5
  • 20
    • 4243754537 scopus 로고    scopus 로고
    • Confirming specificity of RNAi in mammalian cells
    • Lassus, P., J. Rodriguez and Y. Lazebnik, 2002 Confirming specificity of RNAi in mammalian cells. Sci. STKE 147: PL13.
    • (2002) Sci. STKE , vol.147
    • Lassus, P.1    Rodriguez, J.2    Lazebnik, Y.3
  • 21
    • 33748939584 scopus 로고    scopus 로고
    • Prevalence of off-target effects in Drosophila RNA interference screens
    • DOI 10.1038/nature05179, PII NATURE05179
    • Ma, Y., A. Creanga, L. Lum and P. A. Beachy, 2006 Prevalence of off-target effects in Drosophila RNA interference screens. Nature 443: 359-363. (Pubitemid 44435157)
    • (2006) Nature , vol.443 , Issue.7109 , pp. 359-363
    • Ma, Y.1    Creanga, A.2    Lum, L.3    Beachy, P.A.4
  • 22
    • 0041530719 scopus 로고    scopus 로고
    • Retrofitting BACs with G418 resistance, luciferase, and oriP and EBNA-1: New vectors for in vitro and in vivo delivery
    • Magin-Lachmann, C., G. Kotzamanis, L. D'Aiuto, E. Wagner and C. Huxley, 2003 Retrofitting BACs with G418 resistance, luciferase, and oriP and EBNA-1: new vectors for in vitro and in vivo delivery. BMC Biotechnol. 3: 2.
    • (2003) BMC Biotechnol. , vol.3 , pp. 2
    • Magin-Lachmann, C.1    Kotzamanis, G.2    D'Aiuto, L.3    Wagner, E.4    Huxley, C.5
  • 23
    • 41349092785 scopus 로고    scopus 로고
    • Exploiting position effects and the gypsy retrovirus insulator to engineer precisely expressed transgenes
    • Markstein, M., C. Pitsouli, C. Villalta, S. E. Celniker and N. Perrimon, 2008 Exploiting position effects and the gypsy retrovirus insulator to engineer precisely expressed transgenes. Nat. Genet. 40: 476-483.
    • (2008) Nat. Genet. , vol.40 , pp. 476-483
    • Markstein, M.1    Pitsouli, C.2    Villalta, C.3    Celniker, S.E.4    Perrimon, N.5
  • 24
    • 65549085440 scopus 로고    scopus 로고
    • Genome-wide analysis of Notch signalling in Drosophila by transgenic RNAi
    • Mummery-Widmer, J.L., M. Yamazaki, T. Stoeger, M. Novatchkova, S. Bhalerao et al., 2009 Genome-wide analysis of Notch signalling in Drosophila by transgenic RNAi. Nature 458: 987-992.
    • (2009) Nature , vol.458 , pp. 987-992
    • Mummery-Widmer, J.L.1    Yamazaki, M.2    Stoeger, T.3    Novatchkova, M.4    Bhalerao, S.5
  • 25
    • 70350139873 scopus 로고    scopus 로고
    • A Drosophila resource of transgenic RNAi lines for neurogenetics
    • Ni, J. Q., L. P. Liu, R. Binari, R. Hardy, H. S. Shim et al., 2009 A Drosophila resource of transgenic RNAi lines for neurogenetics. Genetics 182: 1089-1100.
    • (2009) Genetics , vol.182 , pp. 1089-1100
    • Ni, J.Q.1    Liu, L.P.2    Binari, R.3    Hardy, R.4    Shim, H.S.5
  • 26
    • 33846466430 scopus 로고    scopus 로고
    • Applications of high-throughput RNA interference screens to problems in cell and developmental biology
    • DOI 10.1534/genetics.106.069963
    • Perrimon, N., and B. Mathey-Prevot, 2007a Applications of highthroughput RNA interference screens to problems in cell and developmental biology. Genetics 175: 7-16. (Pubitemid 46168551)
    • (2007) Genetics , vol.175 , Issue.1 , pp. 7-16
    • Perrimon, N.1    Mathey-Prevot, B.2
  • 27
    • 42449103253 scopus 로고    scopus 로고
    • Matter Arising: Off-targets and genome-scale RNAi screens in Drosophila
    • Perrimon, N., and B. Mathey-Prevot, 2007b Matter Arising: off-targets and genome-scale RNAi screens in Drosophila. FLY 1: 1-5.
    • (2007) FLY , vol.1 , pp. 1-5
    • Perrimon, N.1    Mathey-Prevot, B.2
  • 28
    • 0024198509 scopus 로고
    • The period gene of Drosophila carries species-specific behavioral instructions
    • Petersen, G., J. C. Hall and M. Rosbash, 1988 The period gene of Drosophila carries species-specific behavioral instructions. EMBO J. 7: 3939-3947.
    • (1988) EMBO J. , vol.7 , pp. 3939-3947
    • Petersen, G.1    Hall, J.C.2    Rosbash, M.3
  • 29
    • 38449084517 scopus 로고    scopus 로고
    • Design and implementation of high-throughput RNAi screens in cultured Drosophila cells
    • DOI 10.1038/nprot.2007.250, PII NPROT.2007.250
    • Ramadan, N., I. Flockhart, M. Booker, N. Perrimon and B. Mathey-Prevot, 2007 Design and implementation of highthroughput RNAi screens in cultured Drosophila cells. Nat. Protocols 2: 2245-2264. (Pubitemid 351565864)
    • (2007) Nature Protocols , vol.2 , Issue.9 , pp. 2245-2264
    • Ramadan, N.1    Flockhart, I.2    Booker, M.3    Perrimon, N.4    Mathey-Prevot, B.5
  • 30
    • 19944434180 scopus 로고    scopus 로고
    • Comparative genome sequencing of Drosophila pseudoobscura: Chromosomal, gene, and cis-element evolution
    • Richards, S., Y. Liu, B. R. Bettencourt, P. Hradecky, R. Nielsen et al., 2005 Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution. Genome Res. 15: 1-18.
    • (2005) Genome Res. , vol.15 , pp. 1-18
    • Richards, S.1    Liu, Y.2    Bettencourt, B.R.3    Hradecky, P.4    Nielsen, R.5
  • 31
    • 33748999996 scopus 로고    scopus 로고
    • A recombineering pipeline for functional genomics applied to Caenorhabditis elegans
    • Sarov, M., S. Schneider, A. Pozniakovski, A. Roguev, S. Ernst et al., 2006 A recombineering pipeline for functional genomics applied to Caenorhabditis elegans. Nat. Methods 3: 839-844.
    • (2006) Nat. Methods , vol.3 , pp. 839-844
    • Sarov, M.1    Schneider, S.2    Pozniakovski, A.3    Roguev, A.4    Ernst, S.5
  • 32
    • 40849150778 scopus 로고    scopus 로고
    • Identification of SUMO-dependent chromatin-associated transcriptional repression components by a genome-wide RNAi screen
    • Stielow, B., A. Sapetschnig, I. Kruger, N. Kunert, A. Brehm et al., 2008 Identification of SUMO-dependent chromatin-associated transcriptional repression components by a genome-wide RNAi screen. Mol. Cell 29: 742-754.
    • (2008) Mol. Cell , vol.29 , pp. 742-754
    • Stielow, B.1    Sapetschnig, A.2    Kruger, I.3    Kunert, N.4    Brehm, A.5
  • 33
    • 33845698104 scopus 로고    scopus 로고
    • P[acman]: A BAC transgenic platform for targeted insertion of large DNA fragments in D. melanogaster
    • Venken, K. J., Y. He, R.A. Hoskins and H. J. Bellen, 2006 P[acman]: a BAC transgenic platform for targeted insertion of large DNA fragments in D. melanogaster. Science 314: 1747-1751.
    • (2006) Science , vol.314 , pp. 1747-1751
    • Venken, K.J.1    He, Y.2    Hoskins, R.A.3    Bellen, H.J.4
  • 34
    • 0035154451 scopus 로고    scopus 로고
    • An efficient method for high-fidelity BAC/PAC retrofitting with a selectable marker for mammalian cell transfection
    • DOI 10.1101/gr.159001
    • Wang, Z., P. Engler, A. Longacre and U. Storb, 2001 An efficient method for high-fidelity BAC/PAC retrofitting with a selectable marker formammalian cell transfection. Genome Res. 11: 137-142. (Pubitemid 32117959)
    • (2001) Genome Research , vol.11 , Issue.1 , pp. 137-142
    • Wang, Z.1    Engler, P.2    Longacre, A.3    Storb, U.4
  • 35
    • 0036739377 scopus 로고    scopus 로고
    • Conditionally amplifiable BACs: Switching from single-copy to high-copy vectors and genomic clones
    • Wild, J., Z. Hradecna andW. Szybalski, 2002 Conditionally amplifiable BACs: switching from single-copy to high-copy vectors and genomic clones. Genome Res. 12: 1434-1444.
    • (2002) Genome Res. , vol.12 , pp. 1434-1444
    • Wild, J.1    Hradecna, Z.2    Szybalski, W.3
  • 36
    • 10844256385 scopus 로고    scopus 로고
    • Dissection of DIAP1 functional domains via a mutant replacement strategy
    • Yokokura, T., D. Dresnek, N. Huseinovic, S. Lisi, E. Abdelwahid et al., 2004 Dissection of DIAP1 functional domains via a mutant replacement strategy. J. Biol. Chem. 279: 52603-52612.
    • (2004) J. Biol. Chem. , vol.279 , pp. 52603-52612
    • Yokokura, T.1    Dresnek, D.2    Huseinovic, N.3    Lisi, S.4    Abdelwahid, E.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.