Optimal production of a novel endo-acting β-1,4-xylanase cloned from Saccharophagus degradans 2-40 into Escherichia coli BL21(DE3)

New Biotechnology

Volumn 26, Issue 3-4, 2009, Pages 157-164

  Ko, Ja Kyong ^a   Jung, Min Woo ^a   Kim, Kyoung Heon ^a   Choi, In Geol ^a  

^a Korea University   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

ENZYMES; ESCHERICHIA COLI; GENE EXPRESSION;

ENZYME PRODUCTION; ESCHERICHIA COLI BL21; OPTIMAL CONCENTRATION; OPTIMAL PRODUCTION; RECOMBINANT CELLS; RECOMBINANT XYLANASE; SACCHAROPHAGUS DEGRADANS; SPECIFIC ACTIVITY;

CLONING;

BACTERIAL ENZYME; BACTERIAL PROTEIN; BETA 1,4 XYLANASE; PROTEIN XYN10C; UNCLASSIFIED DRUG; XYLAN;

ARTICLE; CONTROLLED STUDY; ENZYME SYNTHESIS; ESCHERICHIA COLI; FERMENTATION; GENE INDUCTION; GROWTH RATE; LOW TEMPERATURE; NONHUMAN; PRIORITY JOURNAL; PROTEIN EXPRESSION; PROTEOBACTERIA; SACCHAROPHAGUS DEGRADANS; TEMPERATURE SENSITIVITY;

ESCHERICHIA COLI; SACCHAROPHAGUS DEGRADANS 2-40;

EID: 71749093652     PISSN: 18716784     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.nbt.2009.07.009     Document Type: Article

References (44)

1. Kim S., and Dale B.E. Global potential bioethanol production from wasted crops and crop residues. Biomass Bioenerg. 26 (2004) 361-375
2. Kumar R., et al. Bioconversion of lignocellulosic biomass: biochemical and molecular perspectives. J. Ind. Microbiol. Biotechnol. 35 (2008) 377-391
3. Bastawde K.B. Xylan structure, microbial xylanases, and their mode of action. World J. Microbiol. Biotechnol. 8 (1992) 353-368
4. Bak J.S., et al. Improved enzymatic hydrolysis yield of rice straw using electron beam irradiation pretreatment. Bioresour. Technol. 100 (2009) 1285-1290
5. Mosier N., et al. Features of promising technologies for pretreatment of lignocellulosic biomass. Bioresour. Technol. 96 (2005) 673-686
6. Berlin A., et al. Optimization of enzyme complexes for lignocellulose hydrolysis. Biotechnol. Bioeng. 97 (2007) 287-296
7. Murnen H.K., et al. Optimization of ammonia fiber expansion (AFEX) pretreatment and enzymatic hydrolysis of Miscanthus × giganteus to fermentable sugars. Biotechnol. Prog. 23 (2007) 846-850
8. Jeffries T.W., and Jin Y.-S. Metabolic engineering for improved fermentation of pentoses by yeasts. Appl. Microbiol. Biotechnol. 63 (2004) 495-509
9. Tomas-Pejo E., et al. Comparison of SHF and SSF processes from steam-exploded wheat straw for ethanol production by xylose-fermenting and robust glucose-fermenting Saccharomyces cervisiae strains. Biotechnol. Bioeng. 100 (2008) 1122-1131
10. Subramaniyan S., and Prema P. Biotechnology of microbial xylanases: enzymology, molecular biology, and application. Crit. Rev. Biotechnol. 22 (2002) 33-64
11. Hu Y., et al. Cloning and enzymatic characterization of a xylanase gene from a soil-derived metagenomic library with an efficient approach. Appl. Microbiol. Biotechnol. 80 (2008) 823-830
12. Polizeli M.L.T.M., et al. Xylanases from fungi: properties and industrial applications. Appl. Microbiol. Biotechnol. 67 (2005) 577-591
13. Ekborg N.A., et al. Saccharophagus degradans gen. nov., sp. nov., a versatile marine degrader of complex polysaccharides. Int. J. Syst. Evol. Microbiol. 55 (2005) 1545-1549
14. T. J. Bacteriol. 188 (2006) 3849-3861
15. Araki T., et al. Purification and characterization of beta-1,3-xylanase from a marine bacterium Alcaligenes sp. XY-234. J. Gen. Appl. Microbiol. 44 (1998) 269-274
16. Araki T., et al. Cloning, sequencing, and expression in Escherichia coli of the new gene encoding beta-1,3-xylanase from a marine bacterium Vibrio sp. strain XY-214. Appl. Environ. Microbiol. 66 (2000) 1741-1743
17. Wu S., et al. Characterization of a recombinant thermostable xylanase from deep-sea thermophilic Geobacillus sp. MT-1 in East Pacific. Appl. Microbiol. Biotechnol. 72 (2006) 1210-1216
18. Bailey M.J., et al. Interlaboratory testing of methods for assay of xylanase activity. J. Biotechnol. 23 (1992) 257-270
19. Fontes C.M.G.A., et al. A novel Cellvibrio mixtus family 10 xylanase that is both intracellular and expressed under non-inducing conditions. Microbiology 146 (2000) 1959-1967
20. Keskar S.S., et al. Chemical modification of a xylanase from a thermotolerant Streptomyces. Evidence for essential tryptophan and cysteine residues at the active site. Biochem. J. 261 (1989) 49-55
21. Sunna A., and Antranikian G. Xylanolytic enzymes from fungi and bacteria. Crit. Rev. Biotechnol. 17 (1997) 39-67
22. Viet D.N., et al. Purification and properties of beta-1,4-xylanase from Aeromonas caviae W-61. Appl. Environ. Microbiol. 57 (1991) 445-449
23. Baneyx F., and Mujacic M. Recombinant protein folding and misfolding in Escherichia coli. Nat. Biotechnol. 22 (2004) 1399-1408
24. Donovan R.S., et al. Review: optimizing inducer and culture conditions for expression of foreign proteins under the control of the lac promoter. J. Ind. Microbiol. 16 (1996) 145-154
25. Georgiou G., and Valax P. Expression of correctly folded proteins in Escherichia coli. Curr. Opin. Biotechnol. 7 (1996) 190-197
26. Park S., and Ryu D.D.Y. Effect of operating parameters on specific production rate of a cloned-gene product and performance of recombinant fermentation process. Biotechnol. Bioeng. 35 (1990) 287-295
27. Sorensen H.P., and Mortensen K.K. Soluble expression of recombinant proteins in the cytoplasm of Escherichia coli. Microb. Cell. Fact. 4 (2005) 1
28. Glick B.R. Metabolic load and heterologous gene expression. Biotechnol. Adv. 13 (1995) 247-261
29. Hoffmann F., et al. Minimizing inclusion body formation during recombinant protein production in Escherichia coli at bench and pilot plant scale. Enzyme Microb. Technol. 34 (2004) 235-241
30. Le Thanh H., and Hoffmann F. Optimized production of active alpha-glucosidase by recombinant Escherichia coli Evaluation of processes using in vivo reactivation from inclusion bodies. Biotechnol. Prog. 21 (2005) 1053-1061
31. Pinsach J., et al. Influence of process temperature on recombinant enzyme activity in Escherichia coli fed-batch cultures. Enzyme Microb. Technol. 43 (2008) 507-512
32. Idicula-Thomas S., and Balaji P.V. Understanding the relationship between the primary structure of proteins and its propensity to be soluble on overexpression in Escherichia coli. Protein Sci. 14 (2005) 582-592
33. Shin M.H., et al. Strategies for producing recombinant sucrose phosphorylase originating from Bifidobacterium longum in Escherichia coli JM109. Process Biochem. 43 (2008) 822-828
34. Berrow N.S., et al. Recombinant protein expression and solubility screening in Escherichia coli: a comparative study. Acta Crystallogr. D: Biol. Crystallogr. 62 (2006) 1218-1226
35. Lo P.K., et al. Excretory over-expression of Bacillus sp. G1 cyclodextrin glucanotransferase (CGTase) in Escherichia coli: Optimization of the cultivation conditions by response surface methodology. Enzyme Microb. Technol. 40 (2007) 1256-1263
36. Ramirez O.T., et al. Kinetic study of penicillin acylase production by recombinant E. coli in batch cultures. Process Biochem. 29 (1994) 197-206
37. Wang Y.-H., et al. Production of a new sea anemone neurotoxin by recombinant Escherichia coli: Optimization of culture conditions using response surface methodology. Process Biochem. 40 (2005) 2721-2728
38. Bentley W.E., et al. Dynamics of induced CAT expression in E. coli. Biotechnol. Bioeng. 38 (1991) 749-760
39. Baneyx F. Recombinant protein expression in Escherichia coli. Curr. Opin. Biotechnol. 10 (1999) 411-421
40. Hussain H.A., and Ward J.M. Enhanced heterologous expression of two Streptomyces griseolus cytochrome P450s and Streptomyces coelicolor ferredoxin reductase as potentially efficient hydroxylation catalysts. Appl. Environ. Microbiol. 69 (2003) 373-382
41. Sorensen H.P., and Mortensen K.K. Advanced genetic strategies for recombinant protein expression in Escherichia coli. J. Biotechnol. 115 (2005) 113-128
42. Di Lorenzo M., et al. Heterologous production of functional forms of Rhizopus oryzae lipase in Escherichia coli. Appl. Environ. Microbiol. 71 (2005) 8974-8977
43. Peng L., et al. High-level expression of soluble human beta-defensin-2 in Escherichia coli. Process Biochem. 39 (2004) 2199-2205
44. Junker B.H. Scale-up methodologies for Escherichia coli and yeast fermentation processes. J. Biosci. Bioeng. 97 (2004) 347-364