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Volumn 47, Issue 12, 2009, Pages 4006-4020

Polymorphic exact tandem repeat A (PETRA): A newly defined lineage of Mycobacterium tuberculosis in Israel originating predominantly in sub-Saharan Africa

Author keywords

[No Author keywords available]

Indexed keywords

ISONIAZID; RIFAMPICIN;

EID: 71549168302     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/JCM.01270-09     Document Type: Article
Times cited : (9)

References (82)
  • 2
    • 36849095927 scopus 로고    scopus 로고
    • A first insight into the genetic diversity and population structure of Mycobacterium tuberculosis in Zonguldak, Turkey
    • Aktas, E., T. Zozio, F. B. Comert, C. Kulah, O. Aydin, N. Rastogi, and C. Sola. 2007. A first insight into the genetic diversity and population structure of Mycobacterium tuberculosis in Zonguldak, Turkey. Clin. Microbiol. Infect. 14(1):55-59.
    • (2007) Clin. Microbiol. Infect. , vol.14 , Issue.1 , pp. 55-59
    • Aktas, E.1    Zozio, T.2    Comert, F.B.3    Kulah, C.4    Aydin, O.5    Rastogi, N.6    Sola, C.7
  • 4
    • 4544250412 scopus 로고    scopus 로고
    • Utility of fast mycobacterial interspersed repetitive unit-variable number tandem repeat genotyping in clinical mycobacteriological analysis
    • Allix, C., P. Supply, and M. Fauville-Dufaux. 2004. Utility of fast mycobacterial interspersed repetitive unit-variable number tandem repeat genotyping in clinical mycobacteriological analysis. Clin. Infect. Dis. 39:783-789.
    • (2004) Clin. Infect. Dis. , vol.39 , pp. 783-789
    • Allix, C.1    Supply, P.2    Fauville-Dufaux, M.3
  • 5
    • 46749114975 scopus 로고    scopus 로고
    • Evaluation and strategy for use of MIRU-VNTRplus, a multifunctional database for online analysis of genotyping data and phylogenetic identification of Mycobacterium tuberculosis complex isolates
    • Allix-Béguec, C., D. Harmesen, T. Weniger, P. Supply, and S. Niemann. 2008. Evaluation and strategy for use of MIRU-VNTRplus, a multifunctional database for online analysis of genotyping data and phylogenetic identification of Mycobacterium tuberculosis complex isolates. J. Clin. Microbiol. 46:2692-2699.
    • (2008) J. Clin. Microbiol. , vol.46 , pp. 2692-2699
    • Allix-Béguec, C.1    Harmesen, D.2    Weniger, T.3    Supply, P.4    Niemann, S.5
  • 6
    • 42449089412 scopus 로고    scopus 로고
    • Three-year population-based evaluation of standardized mycobacterial interspersed repetitive-unit-variable-number tandem-repeat typing of Mycobacterium tuberculosis
    • DOI 10.1128/JCM.02089-07
    • Allix-Béguec, C., M. Fauville-Dufaux, and P. Supply. 2008. Three-year population- based evaluation of standardized mycobacterial interspersed repetitive- unit-variable-number tandem-repeat typing of Mycobacterium tuberculosis. J. Clin. Microbiol. 46:1398-1406. (Pubitemid 351563586)
    • (2008) Journal of Clinical Microbiology , vol.46 , Issue.4 , pp. 1398-1406
    • Allix-Beguec, C.1    Fauville-Dufaux, M.2    Supply, P.3
  • 8
    • 0034962826 scopus 로고    scopus 로고
    • Comparison of variable number tandem repeat and IS6110-restriction fragment length polymorphism analyses for discrimination of high- And low-copy-number IS6110 Mycobacterium tuberculosis isolates
    • Barlow, E. L., D. M. Gascoyne-Binzi, S. H. Gillespie, A. Dickens, S. Qamer, and P. M. Hawkey. 2001. Comparison of variable number tandem repeat and IS6110-restriction fragment length polymorphism analyses for discrimination of high- and low-copy-number IS6110 Mycobacterium tuberculosis isolates. J. Clin. Microbiol. 39:2453-2457.
    • (2001) J. Clin. Microbiol. , vol.39 , pp. 2453-2457
    • Barlow, E.L.1    Gascoyne-Binzi, D.M.2    Gillespie, S.H.3    Dickens, A.4    Qamer, S.5    Hawkey, P.M.6
  • 9
    • 0033890783 scopus 로고    scopus 로고
    • Mapping of IS6110 insertion sites in two epidemic strains of Mycobacterium tuberculosis
    • Beggs, M. L., K. D. Eisenach, and M. D. Cave. 2000. Mapping of IS6110 insertion sites in two epidemic strains of Mycobacterium tuberculosis. J. Clin. Microbiol. 38:2923-2928.
    • (2000) J. Clin. Microbiol. , vol.38 , pp. 2923-2928
    • Beggs, M.L.1    Eisenach, K.D.2    Cave, M.D.3
  • 10
    • 0036147534 scopus 로고    scopus 로고
    • Global dissemination of the Mycobacterium tuberculosis W-Beijing family strains
    • Bifani, P. J., B. Mathema, N. E. Kurepina, and B. N. Kreiswirth. 2002. Global dissemination of the Mycobacterium tuberculosis W-Beijing family strains. Trends Microbiol. 10:45-51.
    • (2002) Trends Microbiol. , vol.10 , pp. 45-51
    • Bifani, P.J.1    Mathema, B.2    Kurepina, N.E.3    Kreiswirth, B.N.4
  • 11
    • 18044395135 scopus 로고    scopus 로고
    • Immunogenicity of mycobacterial PPE44 (Rv2770c) in Mycobacterium bovis BCG-infected mice
    • Bonanni, D., L. Rindi, N. Lari, and C. Garzelli. 2005. Immunogenicity of mycobacterial PPE44 (Rv2770c) in Mycobacterium bovis BCG-infected mice. J. Med. Microbiol. 54:443-448.
    • (2005) J. Med. Microbiol. , vol.54 , pp. 443-448
    • Bonanni, D.1    Rindi, L.2    Lari, N.3    Garzelli, C.4
  • 14
    • 0036246219 scopus 로고    scopus 로고
    • Molecular epidemiology and drug resistance of Mycobacterium tuberculosis isolates from Ethiopian pulmonary tuberculosis patients with and without human immunodeficiency virus infection
    • Bruchfeld, J., G. Aderaye, I. B. Palme, B. Bjorvatn, S. Ghebremichael, S. Hoffner, and L. Lindquist. 2002. Molecular epidemiology and drug resistance of Mycobacterium tuberculosis isolates from Ethiopian pulmonary tuberculosis patients with and without human immunodeficiency virus infection. J. Clin. Microbiol. 40:1636-1643.
    • (2002) J. Clin. Microbiol. , vol.40 , pp. 1636-1643
    • Bruchfeld, J.1    Aderaye, G.2    Palme, I.B.3    Bjorvatn, B.4    Ghebremichael, S.5    Hoffner, S.6    Lindquist, L.7
  • 15
    • 71549148005 scopus 로고    scopus 로고
    • World TB Day - March 24, 2007
    • Centers for Disease Control and Prevention
    • Centers for Disease Control and Prevention. 2007. World TB Day - March 24, 2007. MMWR Morb. Mortal. Wkly. Rep. 56:245.
    • (2007) MMWR Morb. Mortal. Wkly. Rep. , vol.56 , pp. 245
  • 16
    • 0036775772 scopus 로고    scopus 로고
    • Comparative and functional genomics of the Mycobacterium tuberculosis complex
    • Cole, S. T. 2002. Comparative and functional genomics of the Mycobacterium tuberculosis complex. Microbiology 148:2919-2928.
    • (2002) Microbiology , vol.148 , pp. 2919-2928
    • Cole, S.T.1
  • 20
    • 1842588596 scopus 로고    scopus 로고
    • Cell envelope protein PPE68 contributes to Mycobacterium tuberculosis RD1 immunogenicity independently of a 10-kilodalton culture filtrate protein and ESAT-6
    • Demangel, C., P. Brodin, P. J. Cockle, R. Brosch, L. Majlessi, C. Leclerc, and S. T. Cole. 2004. Cell envelope protein PPE68 contributes to Mycobacterium tuberculosis RD1 immunogenicity independently of a 10-kilodalton culture filtrate protein and ESAT-6. Infect. Immun. 72:2170-2176.
    • (2004) Infect. Immun. , vol.72 , pp. 2170-2176
    • Demangel, C.1    Brodin, P.2    Cockle, P.J.3    Brosch, R.4    Majlessi, L.5    Leclerc, C.6    Cole, S.T.7
  • 23
    • 0034870707 scopus 로고    scopus 로고
    • Molecular evidence for independent occurrence of IS6110 insertions at the same sites of the genome of Mycobacterium tuberculosis in different clinical isolates
    • Fang, Z., D. T. Kenna, C. Doig, D. N. Smittipat, P. Palittapongarnpim, B. Watt, and K. J. Forbes. 2001. Molecular evidence for independent occurrence of IS6110 insertions at the same sites of the genome of Mycobacterium tuberculosis in different clinical isolates. J. Bacteriol. 183:5279-5284.
    • (2001) J. Bacteriol. , vol.183 , pp. 5279-5284
    • Fang, Z.1    Kenna, D.T.2    Doig, C.3    Smittipat, D.N.4    Palittapongarnpim, P.5    Watt, B.6    Forbes, K.J.7
  • 25
    • 0031750390 scopus 로고    scopus 로고
    • Genetic diversity in the Mycobacterium tuberculosis complex based on variable numbers of tandem DNA repeats
    • Frothingham, R., and W. A. Meeker-O'Connell. 1998. Genetic diversity in the Mycobacterium tuberculosis complex based on variable numbers of tandem DNA repeats. Microbiology 144:1189-1196.
    • (1998) Microbiology , vol.144 , pp. 1189-1196
    • Frothingham, R.1    Meeker-O'Connell, W.A.2
  • 26
    • 33751323180 scopus 로고    scopus 로고
    • Evolution and expansion of the Mycobacterium tuberculosis PE and PPE multigene families and their association with the duplication of the ESAT-6 (esx) gene cluster regions
    • Gey van Pittius, N. C., S. L. Sampson, H. Lee, Y. Kim, D. van Helden, and R. M. Warren. 2006. Evolution and expansion of the Mycobacterium tuberculosis PE and PPE multigene families and their association with the duplication of the ESAT-6 (esx) gene cluster regions. BMC Evol. Biol. 6:95.
    • (2006) BMC Evol. Biol. , vol.6 , pp. 95
    • Gey Van Pittius, N.C.1    Sampson, S.L.2    Lee, H.3    Kim, Y.4    Van Helden, D.5    Warren, R.M.6
  • 28
    • 0036259815 scopus 로고    scopus 로고
    • Failure of commercial ligase chain reaction to detect Mycobacterium tuberculosis DNA in sputum samples from a patient with smear-positive pulmonary tuberculosis due to a deletion of the target region
    • Gilpin, C. M., D. J. Dawson, G. O'Kane, J. G. Armstrong, and C. Coulter. 2002. Failure of commercial ligase chain reaction to detect Mycobacterium tuberculosis DNA in sputum samples from a patient with smear-positive pulmonary tuberculosis due to a deletion of the target region. J. Clin. Microbiol. 40:2305-2307.
    • (2002) J. Clin. Microbiol. , vol.40 , pp. 2305-2307
    • Gilpin, C.M.1    Dawson, D.J.2    O'Kane, G.3    Armstrong, J.G.4    Coulter, C.5
  • 30
    • 27744487891 scopus 로고    scopus 로고
    • Selected RD1 peptides for active tuberculosis diagnosis: Comparison of a gamma interferon whole-blood enzymelinked immunosorbent assay and an enzyme-linked immunospot assay
    • Goletti, D., D. Vincenti, S. Carrara, O. Butera, F. Bizzoni, G. Bernardini, M. Amicosante, and E. Girardi. 2005. Selected RD1 peptides for active tuberculosis diagnosis: comparison of a gamma interferon whole-blood enzymelinked immunosorbent assay and an enzyme-linked immunospot assay. Clin. Diagn. Lab. Immunol. 12:1311-1316.
    • (2005) Clin. Diagn. Lab. Immunol. , vol.12 , pp. 1311-1316
    • Goletti, D.1    Vincenti, D.2    Carrara, S.3    Butera, O.4    Bizzoni, F.5    Bernardini, G.6    Amicosante, M.7    Girardi, E.8
  • 31
    • 53649088767 scopus 로고    scopus 로고
    • Discordance between mycobacterial interspersed repetitive-unit-variable- number tandem-repeat typing and IS6110 restriction fragment length polymorphism genotyping for analysis of Mycobacterium tuberculosis Beijing strains in a setting of high incidence of tuberculosis
    • Hanekom, M., G. D. van der Spuy, N. C. Gey van Pittius, C. R. E. McEvoy, K. G. P. Hoek, S. L. Ndabambi, A. M. Jordaan, T. C. Victor, P. D. van Helden, and R. M. Warren. 2008. Discordance between mycobacterial interspersed repetitive-unit-variable-number tandem-repeat typing and IS6110 restriction fragment length polymorphism genotyping for analysis of Mycobacterium tuberculosis Beijing strains in a setting of high incidence of tuberculosis. J. Clin. Microbiol. 46:3338-3345.
    • (2008) J. Clin. Microbiol. , vol.46 , pp. 3338-3345
    • Hanekom, M.1    Van Der Spuy, G.D.2    Gey Van Pittius, N.C.3    McEvoy, C.R.E.4    Hoek, K.G.P.5    Ndabambi, S.L.6    Jordaan, A.M.7    Victor, T.C.8    Van Helden, P.D.9    Warren, R.M.10
  • 32
    • 0030025636 scopus 로고    scopus 로고
    • Evidence for occurrence of the ESAT-6 protein in Mycobacterium tuberculosis and virulent Mycobacterium bovis and for its absence in Mycobacterium bovis BCG
    • Harboe, M., T. Oettinger, H. G. Wiker, I. Rosenkrands, and P. Andersen. 1996. Evidence for occurrence of the ESAT-6 protein in Mycobacterium tuberculosis and virulent Mycobacterium bovis and for its absence in Mycobacterium bovis BCG. Infect. Immun. 64:16-22. (Pubitemid 26009335)
    • (1996) Infection and Immunity , vol.64 , Issue.1 , pp. 16-22
    • Harboe, M.1    Oettinger, T.2    Wiker, H.G.3    Rosenkrands, I.4    Andersen, P.5
  • 33
    • 33646565955 scopus 로고    scopus 로고
    • Spoligotyping of Mycobacterium tuberculosis isolates from Pakistan reveals predominance of Central Asian strain 1 and Beijing isolates
    • Hasan, T., M. Tanveer, A. Kanji, Q. Hasan, S. Ghebremichael, and R. Hasan. 2006. Spoligotyping of Mycobacterium tuberculosis isolates from Pakistan reveals predominance of Central Asian strain 1 and Beijing isolates. J. Clin. Microbiol. 44:1763-1768.
    • (2006) J. Clin. Microbiol. , vol.44 , pp. 1763-1768
    • Hasan, T.1    Tanveer, M.2    Kanji, A.3    Hasan, Q.4    Ghebremichael, S.5    Hasan, R.6
  • 35
    • 0037387040 scopus 로고    scopus 로고
    • PCR-based method to differentiate the subspecies of the Mycobacterium tuberculosis complex on the basis of genomic deletions
    • Huard, R. C., L. C. de Oliveira Lazzarini, W. R. Butler, D. van Soolingen, and J. L. Ho. 2003. PCR-based method to differentiate the subspecies of the Mycobacterium tuberculosis complex on the basis of genomic deletions. J. Clin. Microbiol. 41:1637-1650.
    • (2003) J. Clin. Microbiol. , vol.41 , pp. 1637-1650
    • Huard, R.C.1    De Oliveira Lazzarini, L.C.2    Butler, W.R.3    Van Soolingen, D.4    Ho, J.L.5
  • 38
    • 33750944979 scopus 로고    scopus 로고
    • Population-based study of deletions in five different genomic regions of Mycobacterium tuberculosis and possible clinical relevance of the deletions
    • Kong, Y., M. D. Cave, L. Zhang, B. Foxman, C. F. Marrs, J. H. Bates, and Z. H. Yang. 2006. Population-based study of deletions in five different genomic regions of Mycobacterium tuberculosis and possible clinical relevance of the deletions. J. Clin. Microbiol. 44:3940-3946.
    • (2006) J. Clin. Microbiol. , vol.44 , pp. 3940-3946
    • Kong, Y.1    Cave, M.D.2    Zhang, L.3    Foxman, B.4    Marrs, C.F.5    Bates, J.H.6    Yang, Z.H.7
  • 40
    • 11844262733 scopus 로고    scopus 로고
    • Use of variable-number tandem-repeat typing to differentiate Mycobacterium tuberculosis Beijing family isolates from Hong Kong and comparison with IS6110 restriction fragment length polymorphism typing and spoligotyping
    • Kremer, K., B. K. Y. Au, P. C. W. Yip, R. Skuce, P. Supply, K. M. Kam, and D. van Soolingen. 2005. Use of variable-number tandem-repeat typing to differentiate Mycobacterium tuberculosis Beijing family isolates from Hong Kong and comparison with IS6110 restriction fragment length polymorphism typing and spoligotyping. J. Clin. Microbiol. 43:314-320.
    • (2005) J. Clin. Microbiol. , vol.43 , pp. 314-320
    • Kremer, K.1    Au, B.K.Y.2    Yip, P.C.W.3    Skuce, R.4    Supply, P.5    Kam, K.M.6    Van Soolingen, D.7
  • 41
    • 67651053158 scopus 로고    scopus 로고
    • Association of Mycobacterium tuberculosis complex isolates of BOVIS and Central Asian (CAS) genotypic lineages with extrapulmonary disease
    • Lari, N., L. Rindi, R. Cristofani, N. Rastogi, E. Tortoli, and C. Garzelli. 2009. Association of Mycobacterium tuberculosis complex isolates of BOVIS and Central Asian (CAS) genotypic lineages with extrapulmonary disease. Clin. Microbiol. Infect. 15:538-543.
    • (2009) Clin. Microbiol. Infect. , vol.15 , pp. 538-543
    • Lari, N.1    Rindi, L.2    Cristofani, R.3    Rastogi, N.4    Tortoli, E.5    Garzelli, C.6
  • 42
    • 0034867957 scopus 로고    scopus 로고
    • Identification of one insertion site of IS6110 in Mycobacterium tuberculosis H37Ra and analysis of the RvD2 deletion in M. tuberculosis clinical isolates
    • Lari, N., L. Rindi, and C. Garzelli. 2001. Identification of one insertion site of IS6110 in Mycobacterium tuberculosis H37Ra and analysis of the RvD2 deletion in M. tuberculosis clinical isolates. J. Med. Microbiol. 50:805-811.
    • (2001) J. Med. Microbiol. , vol.50 , pp. 805-811
    • Lari, N.1    Rindi, L.2    Garzelli, C.3
  • 44
    • 42949132877 scopus 로고    scopus 로고
    • Full-exon resequencing reveals toll-like receptor variants contribute to human susceptibility to tuberculosis disease
    • DOI 10.1371/journal.pone.0001318
    • Ma, X., Y. Liu, B. B. Gowen, E. A. Graviss, A. G. Clark, and J. M. Musser. 2007. Full-exon resequencing reveals Toll-like receptor variants contribute to human susceptibility to tuberculosis disease. PLoS One 2:e1318. (Pubitemid 351766827)
    • (2007) PLoS ONE , vol.2 , Issue.12
    • Ma, X.1    Liu, Y.2    Gowen, B.B.3    Graviss, E.A.4    Clark, A.G.5    Musser, J.M.6
  • 45
    • 1242341327 scopus 로고    scopus 로고
    • Macro-array and bioinformatic analyses reveal mycobacterial 'core' genes, variation in the ESAT-6 gene family and new phylogenetic markers for the Mycobacterium tuberculosis complex
    • Marmiesse, M., P. Brodin, C. Buchrieser, C. Gutierrez, N. Simoes, V. Vincent, P. Glaser, S. T. Cole, and R. Brosch. 2004. Macro-array and bioinformatic analyses reveal mycobacterial 'core' genes, variation in the ESAT-6 gene family and new phylogenetic markers for the Mycobacterium tuberculosis complex. Microbiology 150:483-496.
    • (2004) Microbiology , vol.150 , pp. 483-496
    • Marmiesse, M.1    Brodin, P.2    Buchrieser, C.3    Gutierrez, C.4    Simoes, N.5    Vincent, V.6    Glaser, P.7    Cole, S.T.8    Brosch, R.9
  • 46
    • 34648854481 scopus 로고    scopus 로고
    • Rapid clonal analysis of recurrent tuberculosis by direct MIRU-VNTR typing on stored isolates
    • DOI 10.1186/1471-2180-7-73
    • Martin, A., M. Herranz, M. J. R. Serrano, E. Bouza, and D. G. de Viedma. 2007. Rapid clonal analysis of recurrent tuberculosis by direct MIRU-VNTR typing on stored isolates. BMC Microbiol. 7:73-79. (Pubitemid 47460314)
    • (2007) BMC Microbiology , vol.7 , pp. 73
    • Martin, A.1    Herranz, M.2    Serrano, M.J.R.3    Bouza, E.4    De Viedma, D.G.5
  • 48
    • 39549123040 scopus 로고    scopus 로고
    • Toll-like receptor polymorphisms and susceptibility to human disease
    • Misch, E. A., and T. R. Hawn. 2008. Toll-like receptor polymorphisms and susceptibility to human disease. Clin. Sci. 114:347-360.
    • (2008) Clin. Sci. , vol.114 , pp. 347-360
    • Misch, E.A.1    Hawn, T.R.2
  • 50
    • 1842299352 scopus 로고    scopus 로고
    • IS6110 fingerprinting of drug-resistant Mycobacterium tuberculosis strains isolated in Germany during 1995
    • Niemann, S., S. Rusch-Gerdes, and E. Richter. 1997. IS6110 fingerprinting of drug-resistant Mycobacterium tuberculosis strains isolated in Germany during 1995. J. Clin. Microbiol. 35:3015-3020.
    • (1997) J. Clin. Microbiol. , vol.35 , pp. 3015-3020
    • Niemann, S.1    Rusch-Gerdes, S.2    Richter, E.3
  • 51
    • 8644224063 scopus 로고    scopus 로고
    • Molecular characteristics of strains of the Cameroon family, the major group of Mycobacterium tuberculosis in a country with a high prevalence of tuberculosis
    • Niobe-Eyangoh, S. N., C. Kuaban, P. Sorlin, J. Thonnon, V. Vincent, and M. C. Gutierrez. 2004. Molecular characteristics of strains of the Cameroon family, the major group of Mycobacterium tuberculosis in a country with a high prevalence of tuberculosis. J. Clin. Microbiol. 42:5029-5035.
    • (2004) J. Clin. Microbiol. , vol.42 , pp. 5029-5035
    • Niobe-Eyangoh, S.N.1    Kuaban, C.2    Sorlin, P.3    Thonnon, J.4    Vincent, V.5    Gutierrez, M.C.6
  • 52
    • 0037505209 scopus 로고    scopus 로고
    • Evaluation of genotype MTBC assay for differentiation of clinical Mycobacterium tuberculosis complex isolates
    • Richter, E., M. Weizenegger, S. Rusch-Gerdes, and S. Niemann. 2003. Evaluation of genotype MTBC assay for differentiation of clinical Mycobacterium tuberculosis complex isolates. J. Clin. Microbiol. 41:2672-2675.
    • (2003) J. Clin. Microbiol. , vol.41 , pp. 2672-2675
    • Richter, E.1    Weizenegger, M.2    Rusch-Gerdes, S.3    Niemann, S.4
  • 53
    • 0033990048 scopus 로고    scopus 로고
    • Primer3 on theWWWfor general users and for biologist programmers
    • S. Krawetz and S. Misener (ed.) Humana Press, Totowa, NJ
    • Rozen, S., and H. J. Skaletsky. 2000. Primer3 on theWWWfor general users and for biologist programmers, p. 365-386. In S. Krawetz and S. Misener (ed.) Bioinformatics methods and protocols: methods in molecular biology. Humana Press, Totowa, NJ.
    • (2000) Bioinformatics Methods and Protocols: Methods in Molecular Biology , pp. 365-386
    • Rozen, S.1    Skaletsky, H.J.2
  • 54
    • 0034519673 scopus 로고    scopus 로고
    • Detection of deleted genomic DNA using a semiautomated computational analysis of GeneChip data
    • DOI 10.1101/gr.GR-1529R
    • Salamon, H., M. Kato-Maeda, P. M. Small, J. Drenkow, and T. R. Gingeras. 2000. Detection of deleted genomic DNA using a semiautomated computational analysis of GeneChip data. Genome Res. 10:2044-2054. (Pubitemid 32049147)
    • (2000) Genome Research , vol.10 , Issue.12 , pp. 2044-2054
    • Salamon, H.1    Kato-Maeda, M.2    Small, P.M.3    Drenkow, J.4    Gingeras, T.R.5
  • 55
    • 0035700015 scopus 로고    scopus 로고
    • Expression, characterization and subcellular localization of the Mycobacterium tuberculosis PPE gene Rv1917c
    • Sampson, S. L., P. Lukey, R. M. Warren, P. D. van Helden, M. Richardson, and M. J. Everett. 2001. Expression, characterization and subcellular localization of the Mycobacterium tuberculosis PPE gene Rv1917c. Tuberculosis 81:305-317.
    • (2001) Tuberculosis , vol.81 , pp. 305-317
    • Sampson, S.L.1    Lukey, P.2    Warren, R.M.3    Van Helden, P.D.4    Richardson, M.5    Everett, M.J.6
  • 56
    • 0037407609 scopus 로고    scopus 로고
    • IS6110-mediated deletion polymorphism in the direct repeat region of clinical isolates of Mycobacterium tuberculosis
    • Sampson, S. L., R. M. Warren, M. Richardoson, T. C. Victor, A. M. Jordaan, G. D. van der Spuy, and P. D. Helden. 2003. IS6110-mediated deletion polymorphism in the direct repeat region of clinical isolates of Mycobacterium tuberculosis. J. Bacteriol. 185:2856-2866.
    • (2003) J. Bacteriol. , vol.185 , pp. 2856-2866
    • Sampson, S.L.1    Warren, R.M.2    Richardoson, M.3    Victor, T.C.4    Jordaan, A.M.5    Van Der Spuy, G.D.6    Helden, P.D.7
  • 57
    • 1242269296 scopus 로고    scopus 로고
    • IS6110-mediated deletion polymorphism in isogenic strains of Mycobacterium tuberculosis
    • Sampson, S. L., M. Richardson, P. D. van Helden, and R. M. Warren. 2004. IS6110-mediated deletion polymorphism in isogenic strains of Mycobacterium tuberculosis. J. Clin. Microbiol. 42:895-898.
    • (2004) J. Clin. Microbiol. , vol.42 , pp. 895-898
    • Sampson, S.L.1    Richardson, M.2    Van Helden, P.D.3    Warren, R.M.4
  • 58
    • 0036590222 scopus 로고    scopus 로고
    • Molecular analysis of clinical isolates of Mycobacterium tuberculosis collected from patients with persistent disease in the Khartoum region of Sudan
    • Sharaf-Eldin, G. S., N. S. Saeed, M. E. Hamid, A. M. Jordaan, G. D. Van der Spuy, R. M. Warren, P. D. Van Helden, and T. C. Victor. 2002. Molecular analysis of clinical isolates of Mycobacterium tuberculosis collected from patients with persistent disease in the Khartoum region of Sudan. J. Infect. 44:244-251.
    • (2002) J. Infect. , vol.44 , pp. 244-251
    • Sharaf-Eldin, G.S.1    Saeed, N.S.2    Hamid, M.E.3    Jordaan, A.M.4    Van Der Spuy, G.D.5    Warren, R.M.6    Van Helden, P.D.7    Victor, T.C.8
  • 59
    • 23344432883 scopus 로고    scopus 로고
    • Immunogenicity of the Mycobacterium tuberculosis PPE55 (Rv3347c) protein during incipient and clinical tuberculosis
    • Singh, K. K., Y. Dong, S. A. Patibandla, D. N. McMurray, V. K. Arora, and S. Laal. 2005. Immunogenicity of the Mycobacterium tuberculosis PPE55 (Rv3347c) protein during incipient and clinical tuberculosis. Infect. Immun. 73:5004-5014.
    • (2005) Infect. Immun. , vol.73 , pp. 5004-5014
    • Singh, K.K.1    Dong, Y.2    Patibandla, S.A.3    McMurray, D.N.4    Arora, V.K.5    Laal, S.6
  • 61
    • 0037503639 scopus 로고    scopus 로고
    • Genotyping of the Mycobacterium tuberculosis complex using MIRUs: Association with VNTR and spoligotyping for molecular epidemiology and evolutionary genetics
    • Sola, C., I. Filliol, E. Legrand, S. Lesjean, C. Locht, P. Supply, and N. Rastogi. 2003. Genotyping of the Mycobacterium tuberculosis complex using MIRUs: association with VNTR and spoligotyping for molecular epidemiology and evolutionary genetics. Infect. Genet. Evol. 3:125-133.
    • (2003) Infect. Genet. Evol. , vol.3 , pp. 125-133
    • Sola, C.1    Filliol, I.2    Legrand, E.3    Lesjean, S.4    Locht, C.5    Supply, P.6    Rastogi, N.7
  • 63
    • 2442530836 scopus 로고    scopus 로고
    • Use of mycobacterial interspersed repetitive unit - Variable-number tandem repeat typing to examine genetic diversity of Mycobacterium tuberculosis in Singapore
    • Sun, Y. J., R. Bellamy, A. S. G. Lee, S. T. Ng, S. Ravindran, S. Y. Wong, C. Locht, P. Supply, and N. I. Paton. 2004. Use of mycobacterial interspersed repetitive unit - variable-number tandem repeat typing to examine genetic diversity of Mycobacterium tuberculosis in Singapore. J. Clin. Microbiol. 42: 1986-1993.
    • (2004) J. Clin. Microbiol. , vol.42 , pp. 1986-1993
    • Sun, Y.J.1    Bellamy, R.2    Lee, A.S.G.3    Ng, S.T.4    Ravindran, S.5    Wong, S.Y.6    Locht, C.7    Supply, P.8    Paton, N.I.9
  • 65
    • 77951847828 scopus 로고    scopus 로고
    • Multilocus variable number tandem repeat genotyping of Mycobacterium tuberculosis
    • Institut de Biologie/Institut Pasteur de Lille, Lille, France
    • Supply, P. 2005. Multilocus variable number tandem repeat genotyping of Mycobacterium tuberculosis. Technical guide. Institut de Biologie/Institut Pasteur de Lille, Lille, France.
    • (2005) Technical Guide
    • Supply, P.1
  • 66
    • 0034018329 scopus 로고    scopus 로고
    • Variable human minisatellite-like regions in the Mycobacterium tuberculosis genome
    • Supply, P., E. Mazars, S. Lesjean, V. Vincent, B. Gicquel, and C. Locht. 2000. Variable human minisatellite-like regions in the Mycobacterium tuberculosis genome. Mol. Microbiol. 36:762-771.
    • (2000) Mol. Microbiol. , vol.36 , pp. 762-771
    • Supply, P.1    Mazars, E.2    Lesjean, S.3    Vincent, V.4    Gicquel, B.5    Locht, C.6
  • 67
    • 0034796701 scopus 로고    scopus 로고
    • Automated high-throughput genotyping for study of global epidemiology of Mycobacterium tuberculosis based on mycobacterial interspersed repetitive units
    • Supply, P., S. Lesjean, E. Savine, K. Kremer, D. van Soolingen, and C. Locht. 2001. Automated high-throughput genotyping for study of global epidemiology of Mycobacterium tuberculosis based on mycobacterial interspersed repetitive units. J. Clin. Microbiol. 39:3563-3571.
    • (2001) J. Clin. Microbiol. , vol.39 , pp. 3563-3571
    • Supply, P.1    Lesjean, S.2    Savine, E.3    Kremer, K.4    Van Soolingen, D.5    Locht, C.6
  • 69
    • 34249821632 scopus 로고    scopus 로고
    • Mycobacterial bacilli are metabolically active during chronic tuberculosis in murine lungs: Insights from genome- Wide transcriptional profiling
    • Talaat, A. M., S. K. Ward, C.-W. Wu, E. Rondon, C. Tavano, J. P. Bannantine, R. Lyons, and S. A. Johnston. 2007. Mycobacterial bacilli are metabolically active during chronic tuberculosis in murine lungs: insights from genome- wide transcriptional profiling. J. Bacteriol. 189:4265-4274.
    • (2007) J. Bacteriol. , vol.189 , pp. 4265-4274
    • Talaat, A.M.1    Ward, S.K.2    Wu, C.-W.3    Rondon, E.4    Tavano, C.5    Bannantine, J.P.6    Lyons, R.7    Johnston, S.A.8
  • 70
    • 26944437440 scopus 로고    scopus 로고
    • Variation of the Mycobacterium tuberculosis PE-PGRS33 gene among clinical isolates
    • Talarico, S., M. D. Cave, C. F. Marrs, B. Foxman, L. Zhang, and Z. Yang. 2005. Variation of the Mycobacterium tuberculosis PE-PGRS33 gene among clinical isolates. J. Clin. Microbiol. 43:4954-4960.
    • (2005) J. Clin. Microbiol. , vol.43 , pp. 4954-4960
    • Talarico, S.1    Cave, M.D.2    Marrs, C.F.3    Foxman, B.4    Zhang, L.5    Yang, Z.6
  • 73
    • 32344444893 scopus 로고    scopus 로고
    • Clusters of PE and PPE genes of Mycobacterium tuberculosis are organized I operons: Evidence that PE Rv2431c is co-transcribed with PPE Rv2430c and their gene products interact with each other
    • Tundup, S., Y. Akhter, D. Thiagarajan, and S. E. Hasnain. 2006. Clusters of PE and PPE genes of Mycobacterium tuberculosis are organized I operons: evidence that PE Rv2431c is co-transcribed with PPE Rv2430c and their gene products interact with each other. FEBS Lett. 20:1285-1293.
    • (2006) FEBS Lett. , vol.20 , pp. 1285-1293
    • Tundup, S.1    Akhter, Y.2    Thiagarajan, D.3    Hasnain, S.E.4
  • 74
    • 24744462084 scopus 로고    scopus 로고
    • Molecular typing of Mycobacterium tuberculosis by mycobacterial interspersed repetitive unit - Variable-number tandem repeat analysis, a more accurate method for identifying epidemiological links between patients with tuberculosis
    • van Deutekom, H., P. Supply, P. E. de Haas, E. Willery, S. P. Hoijng, C. Locht, R. A. Coutinho, and D. van Soolingen. 2005. Molecular typing of Mycobacterium tuberculosis by mycobacterial interspersed repetitive unit - variable-number tandem repeat analysis, a more accurate method for identifying epidemiological links between patients with tuberculosis. J. Clin. Microbiol. 43:4473-4479.
    • (2005) J. Clin. Microbiol. , vol.43 , pp. 4473-4479
    • Van Deutekom, H.1    Supply, P.2    De Haas, P.E.3    Willery, E.4    Hoijng, S.P.5    Locht, C.6    Coutinho, R.A.7    Van Soolingen, D.8
  • 78
    • 0034800612 scopus 로고    scopus 로고
    • Phospholipase region of Mycobacterium tuberculosis is a preferential locus for IS6110 transposition
    • Vera-Cabrera, L., M. A. Hernandez-Vera, O. Welsh, W. M. Johnson, and J. Castro-Garza. 2001. Phospholipase region of Mycobacterium tuberculosis is a preferential locus for IS6110 transposition. J. Clin. Microbiol. 39:3499-3504.
    • (2001) J. Clin. Microbiol. , vol.39 , pp. 3499-3504
    • Vera-Cabrera, L.1    Hernandez-Vera, M.A.2    Welsh, O.3    Johnson, W.M.4    Castro-Garza, J.5
  • 80
    • 34547866497 scopus 로고    scopus 로고
    • Evaluation of variable numbers of tandem repeat as molecular epidemiological markers of Mycobacterium tuberculosis in Japan
    • Wada, T., S. Maeda, A. Hase, and K. Kobayashi. 2007. Evaluation of variable numbers of tandem repeat as molecular epidemiological markers of Mycobacterium tuberculosis in Japan. J. Med. Microbiol. 56:1052-1057.
    • (2007) J. Med. Microbiol. , vol.56 , pp. 1052-1057
    • Wada, T.1    Maeda, S.2    Hase, A.3    Kobayashi, K.4
  • 81
    • 48649088321 scopus 로고    scopus 로고
    • Genetic basis of virulence attenuation revealed by comparative genomic analysis of Mycobacterium tuberculosis strain H37Ra versus H37Rv
    • Zheng, H., L. Lu, B. Wang, S. Pu, X. Zhang, G. Zhu, W. Shi, L. Zhang, H. Wang, S. Wang, G. Zhao, and Y. Zhang. 2008. Genetic basis of virulence attenuation revealed by comparative genomic analysis of Mycobacterium tuberculosis strain H37Ra versus H37Rv. PloS One 3:e2375.
    • (2008) PloS One , vol.3
    • Zheng, H.1    Lu, L.2    Wang, B.3    Pu, S.4    Zhang, X.5    Zhu, G.6    Shi, W.7    Zhang, L.8    Wang, H.9    Wang, S.10    Zhao, G.11    Zhang, Y.12
  • 82
    • 67049127547 scopus 로고    scopus 로고
    • Whole genome identification of Mycobacterium tuberculosis vaccine candidates by comprehensive data mining and bioinformatic analyses
    • Zvi, A., N. Ariel, J. Fulkerson, J. C. Sadoff, and A. Shafferman. 2008. Whole genome identification of Mycobacterium tuberculosis vaccine candidates by comprehensive data mining and bioinformatic analyses. BMC Med. Genomics 1:18.
    • (2008) BMC Med. Genomics , vol.1 , pp. 18
    • Zvi, A.1    Ariel, N.2    Fulkerson, J.3    Sadoff, J.C.4    Shafferman, A.5


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