Rapid clonal analysis of recurrent tuberculosis by direct MIRU-VNTR typing on stored isolates

BMC Microbiology

Volumn 7, Issue , 2007, Pages

  Martín, Ana ^a   Herránz, Marta ^a   Serrano, María Jesús Ruiz ^a   Bouza, Emilio ^a   De Viedma, Darío García ^a  

^a HOSPITAL GENERAL UNIVERSITARIO GREGORIO MARAÑÓN   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

ANALYTIC METHOD; ARTICLE; BACTERIAL STRAIN; BACTERIUM ISOLATE; HUMAN; MYCOBACTERIAL INTERSPERSED REPETITIVE UNIT VARIBALE NUMBER TANDEM REPEAT TYPINE; RECURRENT DISEASE; REINFECTION; TUBERCULOSIS; ADULT; BACTERIUM IDENTIFICATION; CLASSIFICATION; FEMALE; GENETIC VARIABILITY; GENETICS; MALE; MICROBIOLOGY; MIDDLE AGED; MYCOBACTERIUM TUBERCULOSIS; PATHOLOGY; POLYMERASE CHAIN REACTION;

MYCOBACTERIUM TUBERCULOSIS;

MICROSATELLITE DNA;

ADULT; BACTERIAL TYPING TECHNIQUES; FEMALE; HUMANS; MALE; MICROSATELLITE REPEATS; MIDDLE AGED; MYCOBACTERIUM TUBERCULOSIS; POLYMERASE CHAIN REACTION; RECURRENCE; TUBERCULOSIS; VARIATION (GENETICS);

EID: 34648854481     PISSN: 14712180     EISSN: 14712180     Source Type: Journal    
DOI: 10.1186/1471-2180-7-73     Document Type: Article

References (27)

1. Exogenous reinfection as a cause of recurrent tuberculosis after curative treatment. A van Rie R Warren M Richardson TC Victor RP Gie DA Enarson N Beyers PD van Helden, N Engl J Med 1999 341 16 1174 1179 10.1056/NEJM199910143411602 10519895
2. Molecular epidemiology study of exogenous reinfection in an area with a low incidence of tuberculosis. A Bandera A Gori L Catozzi A Degli Esposti G Marchetti C Molteni G Ferrario L Codecasa V Penati A Matteelli F Franzetti, J Clin Microbiol 2001 39 6 2213 2218 11376059 10.1128/JCM.39.6.2213-2218.2001
3. Exogenous reinfection with tuberculosis on a European island with a moderate incidence of disease. JA Caminero MJ Pena MI Campos-Herrero JC Rodriguez O Afonso C Martin JM Pavon MJ Torres M Burgos P Cabrera PM Small DA Enarson, Am J Respir Crit Care Med 2001 163 3 Pt 1 717 720 11254530
4. Evidence of exogenous reinfection and mixed infection with more than one strain of Mycobacterium tuberculosis among Spanish HIV-infected inmates. F Chaves F Dronda M Alonso-Sanz AR Noriega, Aids 1999 13 5 615 620 10.1097/00002030-199904010-00011 10203387
5. Tuberculosis recurrences: reinfection plays a role in a population whose clinical/epidemiological characteristics do not favor reinfection. D Garcia de Viedma M Marin S Hernangomez M Diaz MJ Ruiz Serrano L Alcala E Bouza, Arch Intern Med 2002 162 16 1873 1879 10.1001/archinte.162.16.1873 12196086
6. Patients with active tuberculosis often have different strains in the same sputum specimen. RM Warren TC Victor EM Streicher M Richardson N Beyers NC van Pittius PD van Helden, Am J Respir Crit Care Med 2004 169 5 610 614 10.1164/rccm.200305-714OC 14701710
7. Mixed infection and clonal representativeness of a single sputum sample in tuberculosis patients from a penitentiary hospital in Georgia. IC Shamputa L Jugheli N Sadradze E Willery F Portaels P Supply L Rigouts, Respir Res 2006 7 99 16846493 10.1186/1465-9921-7-99
8. DNA fingerprint changes in tuberculosis: reinfection, evolution, or laboratory error? JR Glynn MD Yates AC Crampin BM Ngwira FD Mwaungulu GF Black SD Chaguluka DT Mwafulirwa S Floyd C Murphy FA Drobniewski PE Fine, J Infect Dis 2004 190 6 1158 1166 10.1086/423144 15319867
9. Complex clonal features in an mycobacterium tuberculosis infection in a two-year-old child. D Garcia de Viedma M Marin S Andres G Lorenzo MJ Ruiz-Serrano E Bouza, Pediatr Infect Dis J 2006 25 5 457 459 10.1097/01.inf.0000217473.90673.00 16645515
10. Polyclonal and compartmentalized infection by Mycobacterium tuberculosis in patients with both respiratory and extrarespiratory involvement. D Garcia de Viedma M Marin MJ Ruiz Serrano L Alcala E Bouza, J Infect Dis 2003 187 4 695 699 10.1086/368368 12599090
11. Mycobacterium tuberculosis growth at the cavity surface: a microenvironment with failed immunity. G Kaplan FA Post AL Moreira H Wainwright BN Kreiswirth M Tanverdi B Mathema SV Ramaswamy G Walther LM Steyn CE Barry 3rd LG Bekker, Infect Immun 2003 71 12 7099 7108 14638800 10.1128/IAI.71.12.7099- 7108.2003
12. Automated high-throughput genotyping for study of global epidemiology of Mycobacterium tuberculosis based on mycobacterial interspersed repetitive units. P Supply S Lesjean E Savine K Kremer D van Soolingen C Locht, J Clin Microbiol 2001 39 10 3563 3571 11574573 10.1128/JCM.39.10.3563-3571.2001
13. Characterization of clonal complexity in tuberculosis by mycobacterial interspersed repetitive unit-variable-number tandem repeat typing. D Garcia de Viedma N Alonso Rodriguez S Andres MJ Ruiz Serrano E Bouza, J Clin Microbiol 2005 43 11 5660 5664 16272501 10.1128/JCM.43.11.5660-5664.2005
14. Genotypic and phenotypic heterogeneity among Mycobacterium tuberculosis isolates from pulmonary tuberculosis patients. IC Shamputa L Rigouts LA Eyongeta NA El Aila A van Deun AH Salim E Willery C Locht P Supply F Portaels, J Clin Microbiol 2004 42 12 5528 5536 15583277 10.1128/JCM.42.12.5528-5536.2004
15. Genetic polymorphism in Mycobacterium tuberculosis isolates from patients with chronic multidrug-resistant tuberculosis. FA Post PA Willcox B Mathema LM Steyn K Shean SV Ramaswamy EA Graviss E Shashkina BN Kreiswirth G Kaplan, J Infect Dis 2004 190 1 99 106 10.1086/421501 15195248
16. Exogenous reinfection with multidrug-resistant Mycobacterium tuberculosis. GS Turett BA Fazal JE Justman D Alland RM Duncalf EE Telzak, Clin Infect Dis 1997 24 3 513 514 9114210
17. Superinfection with rifampin-isoniazid-streptomycin-ethambutol (RISE)-resistant tuberculosis in three patients with AIDS: confirmation by polymerase chain reaction fingerprinting. DL Horn D Hewlett Jr. WH Haas WR Butler C Alfalla E Tan A Levine A Nayak SM Opal, Ann Intern Med 1994 121 2 115 116 8017724
18. Association between the infectivity of Mycobacterium tuberculosis strains and their efficiency for extrarespiratory infection. D Garcia de Viedma G Lorenzo PJ Cardona NA Rodriguez S Gordillo MJ Serrano E Bouza, J Infect Dis 2005 192 12 2059 2065 10.1086/498245 16288368
19. Utility of fast mycobacterial interspersed repetitive unit-variable number tandem repeat genotyping in clinical mycobacteriological analysis. C Allix P Supply M Fauville-Dufaux, Clin Infect Dis 2004 39 6 783 789 10.1086/423383 15472808
20. Recurrent tuberculosis and exogenous reinfection, Shangai, China. G Shen Z Xue X Shen B Sun X Gui M Shen J Mei Q Gao, Emerg Infect Dis 2006 12 11 1776 1778 17283636
21. Evaluation of a two-step approach for large-scale, prospective genotyping of Mycobacterium tuberculosis isolates in the United States. LS Cowan L Diem T Monson P Wand D Temporado TV Oemig JT Crawford, J Clin Microbiol 2005 43 2 688 695 15695665 10.1128/JCM.43.2.688-695.2005
22. Stability of variable-number tandem repeats of mycobacterial interspersed repetitive units from 12 loci in serial isolates of Mycobacterium tuberculosis. E Savine RM Warren GD van der Spuy N Beyers PD van Helden C Locht P Supply, J Clin Microbiol 2002 40 12 4561 4566 12454152 10.1128/JCM.40.12.4561-4566.2002
23. Proposal for standardization of optimized Mycobacterial Interspersed Repetitive Unit-Variable Number Tandem Repeat typing of Mycobacterium tuberculosis. P Supply C Allix S Lesjean M Cardoso-Oelemann S Rusch-Gerdes E Willery E Savine P de Haas H van Deutekom S Roring P Bifani N Kurepina B Kreiswirth C Sola N Rastogi V Vatin MC Gutierrez M Fauville S Niemann R Skuce K Kremer C Locht D van Soolingen, J Clin Microbiol 2006 44 12 4498 4510 17005759 10.1128/JCM.01392-06
24. Evaluation of the epidemiological relevance of variable-number tandem-repeat genotyping of Mycobacterium bovis and comparison of the method with IS6110 restriction fragment length polymorphism analysis and spoligotyping. C Allix K Walravens C Saegerman J Godfroid P Supply M Fauville-Dufaux, J Clin Microbiol 2006 44 6 1951 1962 16757584 10.1128/JCM.01775-05
25. Analysis of clonal composition of Mycobacterium tuberculosis isolates in primary infections in children. D Garcia de Viedma M Marin MJ Ruiz E Bouza, J Clin Microbiol 2004 42 8 3415 3418 15297476 10.1128/JCM.42.8.3415-3418.2004
26. Strain identification of Mycobacterium tuberculosis by DNA fingerprinting: recommendations for a standardized methodology. JD van Embden MD Cave JT Crawford JW Dale KD Eisenach B Gicquel P Hermans C Martin R McAdam TM Shinnick, J Clin Microbiol 1993 31 2 406 409 8381814
27. Simultaneous detection and strain differentiation of Mycobacterium tuberculosis for diagnosis and epidemiology. J Kamerbeek L Schouls A Kolk M van Agterveld D van Soolingen S Kuijper A Bunschoten H Molhuizen R Shaw M Goyal J van Embden, J Clin Microbiol 1997 35 4 907 914 9157152