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Volumn 10, Issue , 2009, Pages 450-

Complete genome sequence of the sugarcane nitrogen-fixing endophyte Gluconacetobacter diazotrophicus Pal5

(61)  Bertalan, Marcelo a   Albano, Rodolpho b   de Pádua, Vânia c   Rouws, Luc d   Rojas, Cristian a   Hemerly, Adriana a   Teixeira, Kátia d   Schwab, Stefan d   Araujo, Jean d   Oliveira, André d   França, Leonardo a   Magalhães, Viviane a   Alquéres, Sylvia a   Cardoso, Alexander a   Almeida, Wellington a   Loureiro, Marcio M a   Nogueira, Eduardo c,h   Cidade, Daniela b   Oliveira, Denise b   Simão, Tatiana b   more..


Author keywords

[No Author keywords available]

Indexed keywords

ABC TRANSPORTER; ADENINE; AUXIN; BACTERIOCIN; CARBOHYDRATE; CARRIER PROTEIN; CYTOSINE; GUANINE; INDOLEACETIC ACID; NITROGEN; PLANT DNA; REGULATOR PROTEIN; TYROSINE;

EID: 70449482476     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-10-450     Document Type: Article
Times cited : (195)

References (82)
  • 1
    • 0000296738 scopus 로고
    • Nitrogen fixation associated with grasses and cereals: recent progress and perspectives for the future
    • Boddey RM, Döbereiner J. Nitrogen fixation associated with grasses and cereals: recent progress and perspectives for the future. Fertilizer Res 1995, 42:241-250.
    • (1995) Fertilizer Res , vol.42 , pp. 241-250
    • Boddey, R.M.1    Döbereiner, J.2
  • 2
    • 0002563277 scopus 로고
    • A new acid-tolerant nitrogen-fixing bacterium associated with sugarcane
    • Cavalcante VA, Dobereiner J. A new acid-tolerant nitrogen-fixing bacterium associated with sugarcane. Plant Soil 1988, 1008:23-31.
    • (1988) Plant Soil , vol.1008 , pp. 23-31
    • Cavalcante, V.A.1    Dobereiner, J.2
  • 3
    • 0028080550 scopus 로고
    • Infection of sugarcane by the nitrogen-fixing bacterium Acetobacter diazotrophicus
    • James EK, Reis VM, Olivares FL, Baldani JI, Döbereiner J. Infection of sugarcane by the nitrogen-fixing bacterium Acetobacter diazotrophicus. J Exp Bot 1994, 45:757-766.
    • (1994) J Exp Bot , vol.45 , pp. 757-766
    • James, E.K.1    Reis, V.M.2    Olivares, F.L.3    Baldani, J.I.4    Döbereiner, J.5
  • 8
    • 0035119414 scopus 로고    scopus 로고
    • Comparison of benefit to sugarcane plant growth and 15N2 incorporation following inoculation of sterile plants with Acetobacter diazotrophicus wildtype and Nif- mutant strains
    • Sevilla M, Burris RH, Gunapala N, Kennedy C. Comparison of benefit to sugarcane plant growth and 15N2 incorporation following inoculation of sterile plants with Acetobacter diazotrophicus wildtype and Nif- mutant strains. Mol Plant Microbe Interact 2001, 3:358-366.
    • (2001) Mol Plant Microbe Interact , vol.3 , pp. 358-366
    • Sevilla, M.1    Burris, R.H.2    Gunapala, N.3    Kennedy, C.4
  • 9
    • 19644370220 scopus 로고    scopus 로고
    • Antagonism of Gluconacetobacter diazotrophicus (a sugarcane endosymbiont) against Xanthomonas albilineans (pathogen) studied in alginate-immobilized sugarcane stalk tissues
    • Blanco Y, Blanch M, Pin D, Legaz ME, Vicente C. Antagonism of Gluconacetobacter diazotrophicus (a sugarcane endosymbiont) against Xanthomonas albilineans (pathogen) studied in alginate-immobilized sugarcane stalk tissues. J Biosci Bio eng 2005, 4:366-371.
    • (2005) J Biosci Bio eng , vol.4 , pp. 366-371
    • Blanco, Y.1    Blanch, M.2    Pin, D.3    Legaz, M.E.4    Vicente, C.5
  • 10
    • 33745060479 scopus 로고    scopus 로고
    • Inoculation effects of Pseudomonas putida, Gluconacetobacter azotocaptans, and Azospirillum lipoferum on corn plant growth under greenhouse conditions
    • Mehnaz S, Lazarovits G. Inoculation effects of Pseudomonas putida, Gluconacetobacter azotocaptans, and Azospirillum lipoferum on corn plant growth under greenhouse conditions. Microb Ecol 2006, 3:326-335.
    • (2006) Microb Ecol , vol.3 , pp. 326-335
    • Mehnaz, S.1    Lazarovits, G.2
  • 11
    • 33847071244 scopus 로고    scopus 로고
    • Solubilization of insoluble zinc compounds by Gluconacetobacter diazotrophicus and the detrimental action of zinc ion (Zn2+) and zinc chelates on root knot nematode Meloidogyne incognita
    • Saravanan VS, Kalaiarasan P, Madhaiyan M, Thangaraju M. Solubilization of insoluble zinc compounds by Gluconacetobacter diazotrophicus and the detrimental action of zinc ion (Zn2+) and zinc chelates on root knot nematode Meloidogyne incognita. Lett Appl Microbiol 2007, 3:235-241.
    • (2007) Lett Appl Microbiol , vol.3 , pp. 235-241
    • Saravanan, V.S.1    Kalaiarasan, P.2    Madhaiyan, M.3    Thangaraju, M.4
  • 14
    • 70449507571 scopus 로고    scopus 로고
    • Hapmap: Endopyte complete bacterial genomes
    • Hapmap: Endopyte complete bacterial genomes. , http://www.expasy.ch/sprot/hamap/interactions.html
  • 16
    • 0038809083 scopus 로고    scopus 로고
    • Predicting gene expression levels from codon biases in alpha-proteobacterial genomes
    • 10.1073/pnas.1232298100, 165872, 12775761
    • Karlin S, Barnett MJ, Campbell AM, Fisher RF, Mrazek J. Predicting gene expression levels from codon biases in alpha-proteobacterial genomes. Proc Natl Acad Sci 2003, 100:7313-7318. 10.1073/pnas.1232298100, 165872, 12775761.
    • (2003) Proc Natl Acad Sci , vol.100 , pp. 7313-7318
    • Karlin, S.1    Barnett, M.J.2    Campbell, A.M.3    Fisher, R.F.4    Mrazek, J.5
  • 18
    • 0036847064 scopus 로고    scopus 로고
    • Genome evolution in bacterial endosymbionts of insects
    • 10.1038/nrg931, 12415315
    • Wernegreen JJ. Genome evolution in bacterial endosymbionts of insects. Nat Rev Genet 2002, 3:850-861. 10.1038/nrg931, 12415315.
    • (2002) Nat Rev Genet , vol.3 , pp. 850-861
    • Wernegreen, J.J.1
  • 19
    • 9144225618 scopus 로고    scopus 로고
    • Bootstrap, and Bayesian probability and maximum likelihood mapping: exploring new tools for comparative genome analyses
    • 10.1186/1471-2164-3-4, 100357, 11918828
    • Zhaxybayeva O, Gogarten JP. Bootstrap, and Bayesian probability and maximum likelihood mapping: exploring new tools for comparative genome analyses. BMC Genomics 2002, 3:4-19. 10.1186/1471-2164-3-4, 100357, 11918828.
    • (2002) BMC Genomics , vol.3 , pp. 4-19
    • Zhaxybayeva, O.1    Gogarten, J.P.2
  • 20
    • 33748689309 scopus 로고    scopus 로고
    • Interpolated variable order motifs for identification of horizontally acquired DNA: revisiting the Salmonella pathogenicity islands
    • 10.1093/bioinformatics/btl369, 16837528
    • Vernikos GS, Parkhill J. Interpolated variable order motifs for identification of horizontally acquired DNA: revisiting the Salmonella pathogenicity islands. Bioinformatics 2006, 22:2196-2203. 10.1093/bioinformatics/btl369, 16837528.
    • (2006) Bioinformatics , vol.22 , pp. 2196-2203
    • Vernikos, G.S.1    Parkhill, J.2
  • 21
    • 0034682335 scopus 로고    scopus 로고
    • Lateral gene transfer and the nature of bacterial innovation
    • 10.1038/35012500, 10830951
    • Ochman H, Lawrence JG, Groisman EA. Lateral gene transfer and the nature of bacterial innovation. Nature 2000, 405:299-304. 10.1038/35012500, 10830951.
    • (2000) Nature , vol.405 , pp. 299-304
    • Ochman, H.1    Lawrence, J.G.2    Groisman, E.A.3
  • 23
    • 38849135019 scopus 로고    scopus 로고
    • Choosing BLAST options for better detection of orthologs as reciprocal best hits
    • 10.1093/bioinformatics/btm585, 18042555
    • Moreno-Hagelsieb G, Latimer K. Choosing BLAST options for better detection of orthologs as reciprocal best hits. Bioinformatics 2008, 24:319-324. 10.1093/bioinformatics/btm585, 18042555.
    • (2008) Bioinformatics , vol.24 , pp. 319-324
    • Moreno-Hagelsieb, G.1    Latimer, K.2
  • 24
    • 0345390247 scopus 로고    scopus 로고
    • Effect of high sugar concentration on nitrogenase activity of Acetobacter diazotrophicus
    • 10.1007/s002030050672, 9871014
    • Reis VM, Döbereiner J. Effect of high sugar concentration on nitrogenase activity of Acetobacter diazotrophicus. Arch Microbiol 1998, 171:13-18. 10.1007/s002030050672, 9871014.
    • (1998) Arch Microbiol , vol.171 , pp. 13-18
    • Reis, V.M.1    Döbereiner, J.2
  • 25
    • 1542570529 scopus 로고    scopus 로고
    • The roles and regulation of potassium in bacteria
    • full_text, 14604015
    • Epstein W. The roles and regulation of potassium in bacteria. Prog Nucleic Acid Res Mol Biol 2003, 75:293-320. full_text, 14604015.
    • (2003) Prog Nucleic Acid Res Mol Biol , vol.75 , pp. 293-320
    • Epstein, W.1
  • 26
    • 35748942898 scopus 로고    scopus 로고
    • Bacterial osmosensing transporters
    • 10.1016/S0076-6879(07)28005-X, 17875413
    • Wood JM. Bacterial osmosensing transporters. Methods Enzymol 2007, 428:77-107. 10.1016/S0076-6879(07)28005-X, 17875413.
    • (2007) Methods Enzymol , vol.428 , pp. 77-107
    • Wood, J.M.1
  • 27
    • 0041880245 scopus 로고    scopus 로고
    • Effect of some abiotic factors on the biological activity of Gluconacetobacter diazotrophicus
    • 10.1046/j.1365-2672.2003.02007.x, 12911701
    • Tejera NA, Ortega E, González-López J, Lluch C. Effect of some abiotic factors on the biological activity of Gluconacetobacter diazotrophicus. J Appl Microbiol 2003, 95:528-535. 10.1046/j.1365-2672.2003.02007.x, 12911701.
    • (2003) J Appl Microbiol , vol.95 , pp. 528-535
    • Tejera, N.A.1    Ortega, E.2    González-López, J.3    Lluch, C.4
  • 28
    • 47249128194 scopus 로고    scopus 로고
    • A specialized citric acid cycle requiring succinyl-coenzyme A (CoA):acetate CoA-transferase (AarC) confers acetic acid resistance on the acidophile Acetobacter aceti
    • 10.1128/JB.00405-08, 2447011, 18502856
    • Mullins EA, Francois JA, Kappock TJ. A specialized citric acid cycle requiring succinyl-coenzyme A (CoA):acetate CoA-transferase (AarC) confers acetic acid resistance on the acidophile Acetobacter aceti. J Bacteriol 2008, 190:4933-4940. 10.1128/JB.00405-08, 2447011, 18502856.
    • (2008) J Bacteriol , vol.190 , pp. 4933-4940
    • Mullins, E.A.1    Francois, J.A.2    Kappock, T.J.3
  • 29
    • 33644870880 scopus 로고    scopus 로고
    • Putative ABC transporter responsible for acetic acid resistance in Acetobacter aceti
    • 10.1128/AEM.72.1.497-505.2006, 1352267, 16391084
    • Nakano S, Fukaya M, Horinouchi S. Putative ABC transporter responsible for acetic acid resistance in Acetobacter aceti. Appl Environ Microbiol 2006, 72:497-505. 10.1128/AEM.72.1.497-505.2006, 1352267, 16391084.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 497-505
    • Nakano, S.1    Fukaya, M.2    Horinouchi, S.3
  • 30
    • 0036379753 scopus 로고    scopus 로고
    • Cloning and characterization of groESL operon in Acetobacter aceti
    • 10.1263/jbb.94.140, 16233284
    • Okamoto-Kainuma A, Yan W, Kadono S, Tayama K, Koizumi Y, Yanagida F. Cloning and characterization of groESL operon in Acetobacter aceti. J Biosci Bioeng 2002, 94:140-147. 10.1263/jbb.94.140, 16233284.
    • (2002) J Biosci Bioeng , vol.94 , pp. 140-147
    • Okamoto-Kainuma, A.1    Yan, W.2    Kadono, S.3    Tayama, K.4    Koizumi, Y.5    Yanagida, F.6
  • 31
    • 44649171059 scopus 로고    scopus 로고
    • Analysis of proteins responsive to acetic acid in Acetobacter: molecular mechanisms conferring acetic acid resistance in acetic acid bacteria
    • 10.1016/j.ijfoodmicro.2007.05.015, 17920150
    • Nakano S, Fukaya M. Analysis of proteins responsive to acetic acid in Acetobacter: molecular mechanisms conferring acetic acid resistance in acetic acid bacteria. Int J Food Microbiol 2008, 125:54-59. 10.1016/j.ijfoodmicro.2007.05.015, 17920150.
    • (2008) Int J Food Microbiol , vol.125 , pp. 54-59
    • Nakano, S.1    Fukaya, M.2
  • 33
    • 0031945268 scopus 로고    scopus 로고
    • Xanthomonas campestris pv campestris gum mutants: effects on xanthan biosynthesis and plant virulence
    • 107069, 9537354
    • Katzen F, Ferreiro DU, Oddo CG, Ielmini MV, Becker A, Puhler A, Ielpi L. Xanthomonas campestris pv campestris gum mutants: effects on xanthan biosynthesis and plant virulence. J Bacteriol 1998, 180:1607-1617. 107069, 9537354.
    • (1998) J Bacteriol , vol.180 , pp. 1607-1617
    • Katzen, F.1    Ferreiro, D.U.2    Oddo, C.G.3    Ielmini, M.V.4    Becker, A.5    Puhler, A.6    Ielpi, L.7
  • 34
    • 33947423279 scopus 로고    scopus 로고
    • Xylella fastidiosa requires polygalacturonase for colonization and pathogenicity in Vitis vinifera grapevines
    • Roper MC, Greve LC, Warren JG, Labavitch JM, Kirkpatrick BC. Xylella fastidiosa requires polygalacturonase for colonization and pathogenicity in Vitis vinifera grapevines. Mol Plant Microbe Interact 2007, 204:411-419.
    • (2007) Mol Plant Microbe Interact , vol.204 , pp. 411-419
    • Roper, M.C.1    Greve, L.C.2    Warren, J.G.3    Labavitch, J.M.4    Kirkpatrick, B.C.5
  • 35
    • 33645294910 scopus 로고    scopus 로고
    • Plant cell-wall degrading hydrolytic enzymes of Gluconacetobacter diazotrophicus
    • Adriano-Anayal M, Salvador-Figuero M, A OJ, García-Romera I. Plant cell-wall degrading hydrolytic enzymes of Gluconacetobacter diazotrophicus. Symbiosis 2005, 40:151-156.
    • (2005) Symbiosis , vol.40 , pp. 151-156
    • Adriano-Anayal, M.1    Salvador-Figuero, M.2    A, O.J.3    García-Romera, I.4
  • 36
    • 0034460606 scopus 로고    scopus 로고
    • Characterization of a major cluster of nif, and fix, and and associated genes in a sugarcane endophyte, and Acetobacter diazotrophicus
    • 10.1128/JB.182.24.7088-7091.2000, 94840, 11092875
    • Lee S, Reth A, Meletzus D, Sevilla M, Kennedy C. Characterization of a major cluster of nif, and fix, and and associated genes in a sugarcane endophyte, and Acetobacter diazotrophicus. J Bacteriol 2000, 182:7088-7091. 10.1128/JB.182.24.7088-7091.2000, 94840, 11092875.
    • (2000) J Bacteriol , vol.182 , pp. 7088-7091
    • Lee, S.1    Reth, A.2    Meletzus, D.3    Sevilla, M.4    Kennedy, C.5
  • 37
    • 0036786880 scopus 로고    scopus 로고
    • Evidence for conformational protection of nitrogenase against oxygen in Gluconacetobacter diazotrophicus by a putative FeSII protein
    • 10.1128/JB.184.20.5805-5809.2002, 139593, 12270840
    • Ureta A, Nordlund S. Evidence for conformational protection of nitrogenase against oxygen in Gluconacetobacter diazotrophicus by a putative FeSII protein. J Bacteriol 2002, 184:5805-5809. 10.1128/JB.184.20.5805-5809.2002, 139593, 12270840.
    • (2002) J Bacteriol , vol.184 , pp. 5805-5809
    • Ureta, A.1    Nordlund, S.2
  • 38
    • 0037019820 scopus 로고    scopus 로고
    • Isolation and characterization of the glnD gene of Gluconacetobacter diazotrophicus, encoding a putative uridylyltransferase/uridylyl-removing enzyme
    • 10.1016/S0378-1119(02)00881-8, 12384297
    • Perlova O, Nawroth R, Zellermann EM, Meletzus D. Isolation and characterization of the glnD gene of Gluconacetobacter diazotrophicus, encoding a putative uridylyltransferase/uridylyl-removing enzyme. Gene 2002, 297:159-168. 10.1016/S0378-1119(02)00881-8, 12384297.
    • (2002) Gene , vol.297 , pp. 159-168
    • Perlova, O.1    Nawroth, R.2    Zellermann, E.M.3    Meletzus, D.4
  • 39
    • 33751566136 scopus 로고    scopus 로고
    • The HD-GYP domain, cyclic di-GMP signaling, and bacterial virulence to plants
    • 10.1094/MPMI-19-1378, 17153922
    • Dow JM, Fouhy Y, Lucey JF, Ryan RP. The HD-GYP domain, cyclic di-GMP signaling, and bacterial virulence to plants. Mol Plant Microbe Interact 2006, 19:1378-1384. 10.1094/MPMI-19-1378, 17153922.
    • (2006) Mol Plant Microbe Interact , vol.19 , pp. 1378-1384
    • Dow, J.M.1    Fouhy, Y.2    Lucey, J.F.3    Ryan, R.P.4
  • 43
    • 37649013570 scopus 로고    scopus 로고
    • Ecological occurrence of Gluconacetobacter diazotrophicus and nitrogen-fixing Acetobacteraceae members: their possible role in plant growth promotion
    • 10.1007/s00248-007-9258-6, 17574542
    • Saravanan VS, Madhaiyan M, Osborne J, Thangaraju M, Sa TM. Ecological occurrence of Gluconacetobacter diazotrophicus and nitrogen-fixing Acetobacteraceae members: their possible role in plant growth promotion. Microb Ecol 2008, 55:130-140. 10.1007/s00248-007-9258-6, 17574542.
    • (2008) Microb Ecol , vol.55 , pp. 130-140
    • Saravanan, V.S.1    Madhaiyan, M.2    Osborne, J.3    Thangaraju, M.4    Sa, T.M.5
  • 44
    • 3843121975 scopus 로고    scopus 로고
    • Indole-3-acetic acid biosynthesis is deficient in Gluconacetobacter diazotrophicus strains with mutations in cytochrome c biogenesis genes
    • 10.1128/JB.186.16.5384-5391.2004, 490937, 15292139
    • Lee S, Flores-Encarnación M, Contreras-Zentella M, Garcia-Flores L, Escamilla JE, Kennedy C. Indole-3-acetic acid biosynthesis is deficient in Gluconacetobacter diazotrophicus strains with mutations in cytochrome c biogenesis genes. J Bacteriol 2004, 186:5384-5391. 10.1128/JB.186.16.5384-5391.2004, 490937, 15292139.
    • (2004) J Bacteriol , vol.186 , pp. 5384-5391
    • Lee, S.1    Flores-Encarnación, M.2    Contreras-Zentella, M.3    Garcia-Flores, L.4    Escamilla, J.E.5    Kennedy, C.6
  • 45
    • 1642424373 scopus 로고    scopus 로고
    • Bacterial volatiles induce systemic resistance in Arabidopsis
    • 10.1104/pp.103.026583, 389924, 14976231
    • Ryu CM, Farag MA, Hu CH, Reddy MS, Kloepper JW, Paré PW. Bacterial volatiles induce systemic resistance in Arabidopsis. Plant Physiol 2004, 134:1017-1026. 10.1104/pp.103.026583, 389924, 14976231.
    • (2004) Plant Physiol , vol.134 , pp. 1017-1026
    • Ryu, C.M.1    Farag, M.A.2    Hu, C.H.3    Reddy, M.S.4    Kloepper, J.W.5    Paré, P.W.6
  • 46
    • 0025782263 scopus 로고
    • Purification, characterization and some properties of diacetyl(acetoin) reductase from Enterobacter aerogenes
    • 10.1111/j.1432-1033.1991.tb16019.x, 2040298
    • Carballo J, Martin R, Bernardo A, Gonzalez J. Purification, characterization and some properties of diacetyl(acetoin) reductase from Enterobacter aerogenes. Eur J Biochem 1991, 198:327-332. 10.1111/j.1432-1033.1991.tb16019.x, 2040298.
    • (1991) Eur J Biochem , vol.198 , pp. 327-332
    • Carballo, J.1    Martin, R.2    Bernardo, A.3    Gonzalez, J.4
  • 47
    • 34250674530 scopus 로고    scopus 로고
    • Plant-growth-promoting compounds produced by two agronomically important strains of Azospirillum brasilense, and implications for inoculant formulation
    • 10.1007/s00253-007-0909-9, 17345081
    • Perrig D, Boiero ML, Masciarelli OA, Penna C, Ruiz OA, Cassán FD, Luna MV. Plant-growth-promoting compounds produced by two agronomically important strains of Azospirillum brasilense, and implications for inoculant formulation. Appl Microbiol Biotechnol 2007, 75:1143-1150. 10.1007/s00253-007-0909-9, 17345081.
    • (2007) Appl Microbiol Biotechnol , vol.75 , pp. 1143-1150
    • Perrig, D.1    Boiero, M.L.2    Masciarelli, O.A.3    Penna, C.4    Ruiz, O.A.5    Cassán, F.D.6    Luna, M.V.7
  • 48
    • 0031939581 scopus 로고    scopus 로고
    • Production of indole-3-acetic acid and gibberellins A(1) and A(3) by Acetobacter diazotrophicus and Herbaspirillum seropedicae in chemically-defined culture media
    • Bastian F, Cohen A, Piccoli P, Luna V, Baraldi R, Bottini R. Production of indole-3-acetic acid and gibberellins A(1) and A(3) by Acetobacter diazotrophicus and Herbaspirillum seropedicae in chemically-defined culture media. Plant Growth Regulation 1998, 24:7-11.
    • (1998) Plant Growth Regulation , vol.24 , pp. 7-11
    • Bastian, F.1    Cohen, A.2    Piccoli, P.3    Luna, V.4    Baraldi, R.5    Bottini, R.6
  • 49
    • 58149507674 scopus 로고    scopus 로고
    • Gibberellin biosynthesis in bacteria: separate ent-copalyl diphosphate and ent-kaurene synthases in Bradyrhizobium japonicum
    • 10.1016/j.febslet.2008.12.052, 19121310
    • Morrone D, Chambers J, Lowry L, Kim G, Anterola A, Bender K, Peters RJ. Gibberellin biosynthesis in bacteria: separate ent-copalyl diphosphate and ent-kaurene synthases in Bradyrhizobium japonicum. FEBS Lett 2009, 583:475-480. 10.1016/j.febslet.2008.12.052, 19121310.
    • (2009) FEBS Lett , vol.583 , pp. 475-480
    • Morrone, D.1    Chambers, J.2    Lowry, L.3    Kim, G.4    Anterola, A.5    Bender, K.6    Peters, R.J.7
  • 50
    • 4744337675 scopus 로고    scopus 로고
    • Enzymatic cyclization reactions of geraniol, farnesol and geranylgeraniol, and those of truncated squalene analogs having C20 and C25 by recombinant squalene cyclase
    • 10.1039/b407001a, 15351829
    • Hoshino T, Kumai Y, Kudo I, Nakano S, Ohashi S. Enzymatic cyclization reactions of geraniol, farnesol and geranylgeraniol, and those of truncated squalene analogs having C20 and C25 by recombinant squalene cyclase. Org Biomol Chem 2004, 2:2650-2657. 10.1039/b407001a, 15351829.
    • (2004) Org Biomol Chem , vol.2 , pp. 2650-2657
    • Hoshino, T.1    Kumai, Y.2    Kudo, I.3    Nakano, S.4    Ohashi, S.5
  • 51
    • 24344510274 scopus 로고    scopus 로고
    • History on the biological nitrogen fixation research in gramminaceous plants: special emphasis on the Brazilian experience
    • Baldani JI, Baldani VLD. History on the biological nitrogen fixation research in gramminaceous plants: special emphasis on the Brazilian experience. Anais da Academia Brasileira de Ciências 2005, 77:549-579.
    • (2005) Anais da Academia Brasileira de Ciências , vol.77 , pp. 549-579
    • Baldani, J.I.1    Baldani, V.L.D.2
  • 52
    • 0029034720 scopus 로고
    • Isolation and enzymatic properties of levansucrase secreted by Acetobacter diazotrophicus SRT4, a bacterium associated with sugar cane
    • 1135807, 7619044
    • Hernandez L, Arrieta J, Menendez C, Vazquez R, Coego A, Suarez V, Selman G, Petit-Glatron MF, Chambert R. Isolation and enzymatic properties of levansucrase secreted by Acetobacter diazotrophicus SRT4, a bacterium associated with sugar cane. Biochem J 1995, 309:113-118. 1135807, 7619044.
    • (1995) Biochem J , vol.309 , pp. 113-118
    • Hernandez, L.1    Arrieta, J.2    Menendez, C.3    Vazquez, R.4    Coego, A.5    Suarez, V.6    Selman, G.7    Petit-Glatron, M.F.8    Chambert, R.9
  • 53
    • 1642277932 scopus 로고    scopus 로고
    • Functional production and secretion of the Gluconacetobacter diazotrophicus fructose-releasing exo-levanase (LsdB) in Pichia pastoris
    • Menéndez C, Hernández L, Banguela A, País J. Functional production and secretion of the Gluconacetobacter diazotrophicus fructose-releasing exo-levanase (LsdB) in Pichia pastoris. Enz Microbial Technol 2004, 34:446-452.
    • (2004) Enz Microbial Technol , vol.34 , pp. 446-452
    • Menéndez, C.1    Hernández, L.2    Banguela, A.3    País, J.4
  • 54
    • 3242808951 scopus 로고    scopus 로고
    • A Type II Protein Secretory Pathway Required for Levansucrase Secretion by Gluconacetobacter diazotrophicus
    • 10.1128/JB.186.15.5031-5039.2004, 451657, 15262940
    • Arrieta JG, Sotolongo M, Menéndez C, Alfonso D, Trujillo LE, Soto M, Ramírez R, Hernandez L. A Type II Protein Secretory Pathway Required for Levansucrase Secretion by Gluconacetobacter diazotrophicus. J Bacteriol 2004, 186:5031-5039. 10.1128/JB.186.15.5031-5039.2004, 451657, 15262940.
    • (2004) J Bacteriol , vol.186 , pp. 5031-5039
    • Arrieta, J.G.1    Sotolongo, M.2    Menéndez, C.3    Alfonso, D.4    Trujillo, L.E.5    Soto, M.6    Ramírez, R.7    Hernandez, L.8
  • 55
    • 62149088567 scopus 로고    scopus 로고
    • Transcriptional Regulation and Signal-Peptide-Dependent Secretion of Exolevanase (LsdB) in the Endophyte Gluconacetobacter diazotrophicus
    • 10.1128/AEM.01887-08, 2655460, 19139238
    • Menéndez C, Banguela A, Caballero-Mellado J, Hernández L. Transcriptional Regulation and Signal-Peptide-Dependent Secretion of Exolevanase (LsdB) in the Endophyte Gluconacetobacter diazotrophicus. Appl Environ Microbiol 2009, 75:1782-1785. 10.1128/AEM.01887-08, 2655460, 19139238.
    • (2009) Appl Environ Microbiol , vol.75 , pp. 1782-1785
    • Menéndez, C.1    Banguela, A.2    Caballero-Mellado, J.3    Hernández, L.4
  • 56
    • 0025863496 scopus 로고
    • Glucose metabolism and gluconic acid production by Acetobacter diazotrophicus
    • Attwood MM, van Dijken JP, Pronk JT. Glucose metabolism and gluconic acid production by Acetobacter diazotrophicus. J Ferment Bioeng 1991, 72:101-105.
    • (1991) J Ferment Bioeng , vol.72 , pp. 101-105
    • Attwood, M.M.1    van Dijken, J.P.2    Pronk, J.T.3
  • 57
    • 33644616684 scopus 로고    scopus 로고
    • Glucose metabolism in batch and continuous cultures of Gluconacetobacter diazotrophicus PAl 3
    • Luna MF, Bernardelli CE, Galar ML, Boiardi JL. Glucose metabolism in batch and continuous cultures of Gluconacetobacter diazotrophicus PAl 3. Cur Microbiol 2006, 52:163-168.
    • (2006) Cur Microbiol , vol.52 , pp. 163-168
    • Luna, M.F.1    Bernardelli, C.E.2    Galar, M.L.3    Boiardi, J.L.4
  • 58
    • 0033787553 scopus 로고    scopus 로고
    • The carbon source influences the energetic efficiency of the respiratory chain of N2-fixing Acetobacter diazotrophicus
    • 10.1007/s002530000425, 11092633
    • Luna MF, Mignone CF, Boiardi JL. The carbon source influences the energetic efficiency of the respiratory chain of N2-fixing Acetobacter diazotrophicus. Appl Microbiol Biotechnol 2000, 54:564-569. 10.1007/s002530000425, 11092633.
    • (2000) Appl Microbiol Biotechnol , vol.54 , pp. 564-569
    • Luna, M.F.1    Mignone, C.F.2    Boiardi, J.L.3
  • 59
    • 0036166453 scopus 로고    scopus 로고
    • Quinoproteins: structure, function, and biotechnological applications
    • 10.1007/s00253-001-0851-1, 11831471
    • Matsushita K, Toyama H, Yamada M, Adachi O. Quinoproteins: structure, function, and biotechnological applications. Appl Microbiol Biotechnol 2002, 58:13-22. 10.1007/s00253-001-0851-1, 11831471.
    • (2002) Appl Microbiol Biotechnol , vol.58 , pp. 13-22
    • Matsushita, K.1    Toyama, H.2    Yamada, M.3    Adachi, O.4
  • 60
    • 33144482388 scopus 로고    scopus 로고
    • Pyrroloquinoline quinone-dependent dehydrogenases from Ketogulonicigenium vulgare catalyze the direct conversion of L-sorbosone to L-ascorbic acid
    • 10.1128/AEM.72.2.1487-1495.2006, 1392885, 16461703
    • Miyazaki T, Sugisawa T, Hoshino T. Pyrroloquinoline quinone-dependent dehydrogenases from Ketogulonicigenium vulgare catalyze the direct conversion of L-sorbosone to L-ascorbic acid. Appl Environ Microbiol 2006, 72:1487-1495. 10.1128/AEM.72.2.1487-1495.2006, 1392885, 16461703.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 1487-1495
    • Miyazaki, T.1    Sugisawa, T.2    Hoshino, T.3
  • 61
    • 1842456892 scopus 로고    scopus 로고
    • The versatile bacterial type IV secretion systems
    • 10.1038/nrmicro753, 15035043
    • Cascales E, Christie PJ. The versatile bacterial type IV secretion systems. Nat Rev Microbiol 2003, 1:137-149. 10.1038/nrmicro753, 15035043.
    • (2003) Nat Rev Microbiol , vol.1 , pp. 137-149
    • Cascales, E.1    Christie, P.J.2
  • 62
    • 0032816591 scopus 로고    scopus 로고
    • Essential components of the Ti plasmid trb system, and a type IV macromolecular transporter
    • 93993, 10438776
    • Li PL, Hwang I, Miyagi H, True H, Farrand SK. Essential components of the Ti plasmid trb system, and a type IV macromolecular transporter. J Bacteriol 1999, 181:5033-5041. 93993, 10438776.
    • (1999) J Bacteriol , vol.181 , pp. 5033-5041
    • Li, P.L.1    Hwang, I.2    Miyagi, H.3    True, H.4    Farrand, S.K.5
  • 64
    • 0029980095 scopus 로고    scopus 로고
    • Enzymatic synthesis of a quorum sensing autoinducer through use of defined substrates
    • 10.1126/science.272.5268.1655, 8658141
    • Mor M, Finger L, Stryker J, Fuqua C, Eberhard A, Winans S. Enzymatic synthesis of a quorum sensing autoinducer through use of defined substrates. Science 1996, 272:1655-8. 10.1126/science.272.5268.1655, 8658141.
    • (1996) Science , vol.272 , pp. 1655-1658
    • Mor, M.1    Finger, L.2    Stryker, J.3    Fuqua, C.4    Eberhard, A.5    Winans, S.6
  • 65
    • 0031842606 scopus 로고    scopus 로고
    • Sequence and analysis of the 60 kb conjugative, and bacteriocin-producing plasmid pMRC01 from Lactococcus lactis DPC3147
    • 10.1046/j.1365-2958.1998.00988.x, 9767571
    • Dougherty BA, Hill C, Weidman JF, Richardson DR, Venter JC, Ross RP. Sequence and analysis of the 60 kb conjugative, and bacteriocin-producing plasmid pMRC01 from Lactococcus lactis DPC3147. Mol Microbiol 1998, 29:1029-1038. 10.1046/j.1365-2958.1998.00988.x, 9767571.
    • (1998) Mol Microbiol , vol.29 , pp. 1029-1038
    • Dougherty, B.A.1    Hill, C.2    Weidman, J.F.3    Richardson, D.R.4    Venter, J.C.5    Ross, R.P.6
  • 66
    • 55749108735 scopus 로고    scopus 로고
    • Type IV secretion systems: tools of bacterial horizontal gene transfer and virulence
    • Juhas M, Crook DW, Hood DW. Type IV secretion systems: tools of bacterial horizontal gene transfer and virulence. Cell Microbiol 2008, 1012:2377-2386.
    • (2008) Cell Microbiol , vol.1012 , pp. 2377-2386
    • Juhas, M.1    Crook, D.W.2    Hood, D.W.3
  • 67
    • 36549088197 scopus 로고    scopus 로고
    • Motility and chemotaxis in Agrobacterium tumefaciens surface attachment and biofilm formation
    • 10.1128/JB.00566-07, 2168663, 17766409
    • Merritt PM, Danhorn T, Fuqua C. Motility and chemotaxis in Agrobacterium tumefaciens surface attachment and biofilm formation. J Bacteriol 2007, 189:8005-8014. 10.1128/JB.00566-07, 2168663, 17766409.
    • (2007) J Bacteriol , vol.189 , pp. 8005-8014
    • Merritt, P.M.1    Danhorn, T.2    Fuqua, C.3
  • 68
    • 34247221579 scopus 로고    scopus 로고
    • The tad locus: postcards from the widespread colonization island
    • 10.1038/nrmicro1636, 17435791
    • Tomich M, Planet PJ, Figurski DH. The tad locus: postcards from the widespread colonization island. Nat Rev Microbiol 2007, 5:363-375. 10.1038/nrmicro1636, 17435791.
    • (2007) Nat Rev Microbiol , vol.5 , pp. 363-375
    • Tomich, M.1    Planet, P.J.2    Figurski, D.H.3
  • 69
    • 43349092366 scopus 로고    scopus 로고
    • Validation of a Tn5 transposon mutagenesis system for Gluconacetobacter diazotrophicus through characterization of a flagellar mutant
    • 10.1007/s00203-007-0330-x, 18060666
    • Rouws LF, Simões-Aráujo JL, Hemerly AS, Baldani JI. Validation of a Tn5 transposon mutagenesis system for Gluconacetobacter diazotrophicus through characterization of a flagellar mutant. Arch Microbiol 2008, 189:397-405. 10.1007/s00203-007-0330-x, 18060666.
    • (2008) Arch Microbiol , vol.189 , pp. 397-405
    • Rouws, L.F.1    Simões-Aráujo, J.L.2    Hemerly, A.S.3    Baldani, J.I.4
  • 71
    • 0001884783 scopus 로고
    • Meio simples para o isolamento e cultivo de Xanthomonas campestris pv. Citri Tipo B
    • Rodrigues Neto J, Malavolta VA, Victor O. Meio simples para o isolamento e cultivo de Xanthomonas campestris pv. Citri Tipo B. Summa Phytopathologia 1986, 12:16.
    • (1986) Summa Phytopathologia , vol.12 , pp. 16
    • Rodrigues Neto, J.1    Malavolta, V.A.2    Victor, O.3
  • 72
    • 0029592773 scopus 로고
    • A new DNA sequence assembly program
    • 10.1093/nar/23.24.4992, 307504, 8559656
    • Bonfield JK, Smith KF, Staden R. A new DNA sequence assembly program. Nucleic Acids Res 1995, 23:4992-4999. 10.1093/nar/23.24.4992, 307504, 8559656.
    • (1995) Nucleic Acids Res , vol.23 , pp. 4992-4999
    • Bonfield, J.K.1    Smith, K.F.2    Staden, R.3
  • 74
    • 34147132825 scopus 로고    scopus 로고
    • Identifying bacterial genes and endosymbiont DNA with Glimmer
    • 10.1093/bioinformatics/btm009, 2387122, 17237039
    • Delcher AL, Bratke KA, Powers EC, Salzberg SL. Identifying bacterial genes and endosymbiont DNA with Glimmer. Bioinformatics 2007, 23:673-679. 10.1093/bioinformatics/btm009, 2387122, 17237039.
    • (2007) Bioinformatics , vol.23 , pp. 673-679
    • Delcher, A.L.1    Bratke, K.A.2    Powers, E.C.3    Salzberg, S.L.4
  • 75
    • 38549097071 scopus 로고    scopus 로고
    • The universal protein resource (UniProt)
    • The UniProt Consortium The universal protein resource (UniProt). Nucleic Acids Res 2008, 36:190-195.
    • (2008) Nucleic Acids Res , vol.36 , pp. 190-195
  • 79
    • 34248531753 scopus 로고    scopus 로고
    • Locating proteins in the cell using TargetP, SignalP and related tools
    • 10.1038/nprot.2007.131, 17446895
    • Emanuelsson O, Brunak S, von Heijne G, Nielsen H. Locating proteins in the cell using TargetP, SignalP and related tools. Nat Protoc 2007, 2:953-971. 10.1038/nprot.2007.131, 17446895.
    • (2007) Nat Protoc , vol.2 , pp. 953-971
    • Emanuelsson, O.1    Brunak, S.2    von Heijne, G.3    Nielsen, H.4
  • 80
    • 0035910270 scopus 로고    scopus 로고
    • Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes
    • 10.1006/jmbi.2000.4315, 11152613
    • Krogh A, Larsson B, von Heijne G, Sonnhammer EL. Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. J Mol Biol 2001, 305:567-680. 10.1006/jmbi.2000.4315, 11152613.
    • (2001) J Mol Biol , vol.305 , pp. 567-680
    • Krogh, A.1    Larsson, B.2    von Heijne, G.3    Sonnhammer, E.L.4
  • 81
    • 0030854739 scopus 로고    scopus 로고
    • TRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
    • 10.1093/nar/25.5.955, 146525, 9023104
    • Lowe TM, Eddy SR. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res 1997, 25:955-964. 10.1093/nar/25.5.955, 146525, 9023104.
    • (1997) Nucleic Acids Res , vol.25 , pp. 955-964
    • Lowe, T.M.1    Eddy, S.R.2
  • 82
    • 56649123520 scopus 로고    scopus 로고
    • Artemis and ACT: viewing, annotating and comparing sequences stored in a relational database
    • 10.1093/bioinformatics/btn529, 2606163,2606163, 18845581
    • Carver T, Berriman M, Tivey A, Patel C, Böhme U, Barrell BG, Parkhill J, Rajandream MA. Artemis and ACT: viewing, annotating and comparing sequences stored in a relational database. Bioinformatics 2008, 24:2672-2676. 10.1093/bioinformatics/btn529, 2606163,2606163, 18845581.
    • (2008) Bioinformatics , vol.24 , pp. 2672-2676
    • Carver, T.1    Berriman, M.2    Tivey, A.3    Patel, C.4    Böhme, U.5    Barrell, B.G.6    Parkhill, J.7    Rajandream, M.A.8


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