메뉴 건너뛰기




Volumn 50, Issue 1-2, 2008, Pages 19-28

Physical and genetic map of the Gluconacetobacter diazotrophicus PAL5 chromosome

Author keywords

Genetic map; Gluconacetobacter diazotrophicus; PFGE; Physical map; rrn operons

Indexed keywords

BACTERIAL DNA; DNA FRAGMENT; GENOMIC DNA; RESTRICTION ENDONUCLEASE;

EID: 55949131514     PISSN: 01874640     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (1)

References (40)
  • 1
    • 24344510274 scopus 로고    scopus 로고
    • History on the biological nitrogen fixation research in graminaceous plants: Special emphasis on the Brazilian experience
    • Baldani JI, Baldani VLD. 2005. History on the biological nitrogen fixation research in graminaceous plants: special emphasis on the Brazilian experience. An. Acad. Bras. Ciênc. 77(3): 549-579.
    • (2005) An. Acad. Bras. Ciênc , vol.77 , Issue.3 , pp. 549-579
    • Baldani, J.I.1    Baldani, V.L.D.2
  • 3
    • 26844490120 scopus 로고    scopus 로고
    • Isolation from Gluconacetobacter diazotrophicus cell walls of specific receptors for sugarcane glycoproteins, which act as recognition factors
    • Blanco Y, Arroyo M, Legaz ME, Vicente C. 2005. Isolation from Gluconacetobacter diazotrophicus cell walls of specific receptors for sugarcane glycoproteins, which act as recognition factors. J. Chromatogr. 1093: 204-211.
    • (2005) J. Chromatogr , vol.1093 , pp. 204-211
    • Blanco, Y.1    Arroyo, M.2    Legaz, M.E.3    Vicente, C.4
  • 4
    • 0033798426 scopus 로고    scopus 로고
    • Blank WA, Stemke GW. 2000. A physical and genetic map of the Mycoplasma hyopneumoniae strain J genome. Can. J. Microbiol. 46: 832-840.
    • Blank WA, Stemke GW. 2000. A physical and genetic map of the Mycoplasma hyopneumoniae strain J genome. Can. J. Microbiol. 46: 832-840.
  • 6
    • 0032854268 scopus 로고    scopus 로고
    • A physical map of the chromosome of Xanthomonas campestris pv. Phaseoli var. fuscans BXPF65
    • Chan JWYF, Goodwin PH. 1999. A physical map of the chromosome of Xanthomonas campestris pv. Phaseoli var. fuscans BXPF65. FEMS Microbiol. Lett. 180: 85-90.
    • (1999) FEMS Microbiol. Lett , vol.180 , pp. 85-90
    • Chan, J.W.Y.F.1    Goodwin, P.H.2
  • 7
    • 0003054011 scopus 로고
    • 2 fixing bacteria in association with cereals and sugarcane
    • H Bothe, FJ Briyn, WE Newton Eds, Gustav Fisher, Stuttgart, Cologne
    • 2 fixing bacteria in association with cereals and sugarcane, pp. 717-722. In H Bothe, FJ Briyn, WE Newton (Eds). Nitrogen Fixation. Gustav Fisher, Stuttgart, Cologne.
    • (1988) Nitrogen Fixation , pp. 717-722
    • Döbereiner, J.1    Reis, V.2    Lazarini, A.C.3
  • 9
    • 0036708948 scopus 로고    scopus 로고
    • Pulsed field gel electrophoretic analysis of the genome of Lactobacillus gasseri ATCC33323, and construction of a physical map
    • El-Osta YGA, Hillier AJ, Davidson BE, Dobos M. 2002. Pulsed field gel electrophoretic analysis of the genome of Lactobacillus gasseri ATCC33323, and construction of a physical map. Electrophoresis. 23: 3321-3331.
    • (2002) Electrophoresis , vol.23 , pp. 3321-3331
    • El-Osta, Y.G.A.1    Hillier, A.J.2    Davidson, B.E.3    Dobos, M.4
  • 10
    • 0035378204 scopus 로고    scopus 로고
    • Burkholderia, a genus rich in plant-associated nitrogen fixers with wide environmental and geographic distribution
    • Estrada-de los Santos P, Bustillos-Cristales R, Caballero-Mellado J. 2001. Burkholderia, a genus rich in plant-associated nitrogen fixers with wide environmental and geographic distribution. Appl. Environ. Microbiol. 67: 2790-2798.
    • (2001) Appl. Environ. Microbiol , vol.67 , pp. 2790-2798
    • Estrada-de los Santos, P.1    Bustillos-Cristales, R.2    Caballero-Mellado, J.3
  • 11
    • 20644468614 scopus 로고    scopus 로고
    • Nitrogenase proteins from Gluconacetobacter diazotrophicus, a sugarcane-colonizing bacterium
    • Fischer K, Newton WE. 2005. Nitrogenase proteins from Gluconacetobacter diazotrophicus, a sugarcane-colonizing bacterium. Biochim. Biophys. ACTA. 1750: 154-165.
    • (2005) Biochim. Biophys. ACTA , vol.1750 , pp. 154-165
    • Fischer, K.1    Newton, W.E.2
  • 14
    • 0034667311 scopus 로고    scopus 로고
    • Application of bootstrap techniques to physical mapping
    • Heber S, Hoheisel J, Vingron M. 2000. Application of bootstrap techniques to physical mapping. Genomics. 69: 235-241.
    • (2000) Genomics , vol.69 , pp. 235-241
    • Heber, S.1    Hoheisel, J.2    Vingron, M.3
  • 17
    • 3843121975 scopus 로고    scopus 로고
    • Indole-3-acetic acid biosynthesis is deficient in Gluconacetobacter diazotrophicus strains with mutations in cytochrome c biogenesis genes
    • Lee S, Flores-Encarnación M, Contreras-Zentella M, Garcia-Flores L, Escamilla JE, Kennedy C. 2004. Indole-3-acetic acid biosynthesis is deficient in Gluconacetobacter diazotrophicus strains with mutations in cytochrome c biogenesis genes. J. Bacteriol. 186(16): 5384-5391.
    • (2004) J. Bacteriol , vol.186 , Issue.16 , pp. 5384-5391
    • Lee, S.1    Flores-Encarnación, M.2    Contreras-Zentella, M.3    Garcia-Flores, L.4    Escamilla, J.E.5    Kennedy, C.6
  • 19
  • 20
    • 0038976383 scopus 로고    scopus 로고
    • A chromosome map of the European stone fruit yellows phytoplasma
    • Marcone C, Seemüller E. 2001. A chromosome map of the European stone fruit yellows phytoplasma. Microbiology. 147: 1213-1221.
    • (2001) Microbiology , vol.147 , pp. 1213-1221
    • Marcone, C.1    Seemüller, E.2
  • 22
    • 0346689028 scopus 로고    scopus 로고
    • Population dynamics of Gluconacetobacter diazotrophicus in sugarcane cultivars and its effect on plant growth
    • Munõz-Rojas J, Caballero-Mellado J. 2003. Population dynamics of Gluconacetobacter diazotrophicus in sugarcane cultivars and its effect on plant growth. Microb. Ecol. 46: 454-464.
    • (2003) Microb. Ecol , vol.46 , pp. 454-464
    • Munõz-Rojas, J.1    Caballero-Mellado, J.2
  • 23
    • 23744444422 scopus 로고    scopus 로고
    • Antagonism among Gluconacetobacter diazotrophicus strains in culture media and in endophytic association
    • Munõz-Rojas J, Fuentes-Ramírez LE, Caballero-Mellado J. 2005. Antagonism among Gluconacetobacter diazotrophicus strains in culture media and in endophytic association. FEMS Microbiol. Ecol. 54: 57-66.
    • (2005) FEMS Microbiol. Ecol , vol.54 , pp. 57-66
    • Munõz-Rojas, J.1    Fuentes-Ramírez, L.E.2    Caballero-Mellado, J.3
  • 24
    • 33744781268 scopus 로고    scopus 로고
    • N-fertilizer saving by the inoculation of Gluconacetobacter diazotrophicus and Herbaspirillum sp. in micropropagated sugarcane plants
    • Muthukumarasamy R, Govindarajan M, Vadivelu M, Revathi G. 2006. N-fertilizer saving by the inoculation of Gluconacetobacter diazotrophicus and Herbaspirillum sp. in micropropagated sugarcane plants. Microbiol. Res. 161: 238-245.
    • (2006) Microbiol. Res , vol.161 , pp. 238-245
    • Muthukumarasamy, R.1    Govindarajan, M.2    Vadivelu, M.3    Revathi, G.4
  • 25
    • 0042348365 scopus 로고    scopus 로고
    • Gluconacetobacter diazotrophicus (syn. Acetobacter diazotrophicus), a promising diazotrophic endophyte in tropics
    • Muthukumarasamy R, Rebatí G, Seshadri S, Lakshminarasimhan C. 2002. Gluconacetobacter diazotrophicus (syn. Acetobacter diazotrophicus), a promising diazotrophic endophyte in tropics. Curr. Sci. 83(2): 137-145.
    • (2002) Curr. Sci , vol.83 , Issue.2 , pp. 137-145
    • Muthukumarasamy, R.1    Rebatí, G.2    Seshadri, S.3    Lakshminarasimhan, C.4
  • 26
    • 0009957151 scopus 로고    scopus 로고
    • 2-fixing Acetobacter diazotrophicus against Colletotrichum falcatum Went.: A causal organism of red-rot of sugarcane
    • 2-fixing Acetobacter diazotrophicus against Colletotrichum falcatum Went.: a causal organism of red-rot of sugarcane. Curr. Sci. 78: 1063-1065.
    • (2000) Curr. Sci , vol.78 , pp. 1063-1065
    • Muthukumarasamy, R.1    Revathi, G.2    Vadivelu, M.3
  • 27
    • 0037022422 scopus 로고    scopus 로고
    • Physical and genetic map of Enterococcus faecium ATCC19434 and demonstration of intra and interspecific genomic diversity in enterococci
    • Oana K, Okimura Y, Kawakami Y, Hayashida N, Shimosaka M, Okazaki M, Hayashi T, Ohnishi M. 2002. Physical and genetic map of Enterococcus faecium ATCC19434 and demonstration of intra and interspecific genomic diversity in enterococci. FEMS Microbiol. Lett. 207: 133-139.
    • (2002) FEMS Microbiol. Lett , vol.207 , pp. 133-139
    • Oana, K.1    Okimura, Y.2    Kawakami, Y.3    Hayashida, N.4    Shimosaka, M.5    Okazaki, M.6    Hayashi, T.7    Ohnishi, M.8
  • 28
    • 0034093080 scopus 로고    scopus 로고
    • Chromosome mapping of the sweet potato little leaf phytoplasma reveals genome heterogeneity within the phytoplasmas
    • Padovan AC, Firrao G, Schneider B, Gibb KS. 2000. Chromosome mapping of the sweet potato little leaf phytoplasma reveals genome heterogeneity within the phytoplasmas. Microbiology. 146: 893-902.
    • (2000) Microbiology , vol.146 , pp. 893-902
    • Padovan, A.C.1    Firrao, G.2    Schneider, B.3    Gibb, K.S.4
  • 29
    • 55949124656 scopus 로고    scopus 로고
    • Gluconacetobacter diazotrophicus, a sugar cane endosymbiont, produces a bacteriocin against Xanthomonas albilineans, a sugar cane pathogen
    • Piñon D, Casas M, Blanch M, Fontaniella B, Blanco Y, Vicente C, Solas MT, Legaz ME. 2002. Gluconacetobacter diazotrophicus, a sugar cane endosymbiont, produces a bacteriocin against Xanthomonas albilineans, a sugar cane pathogen. Microbiol. Res. 53: 345-351.
    • (2002) Microbiol. Res , vol.53 , pp. 345-351
    • Piñon, D.1    Casas, M.2    Blanch, M.3    Fontaniella, B.4    Blanco, Y.5    Vicente, C.6    Solas, M.T.7    Legaz, M.E.8
  • 30
    • 0031786573 scopus 로고    scopus 로고
    • Combined Physical and genetic map of the Pseudomonas putida KT2440 chromosome
    • Ramos-Díaz MA, Ramos JL. 1998. Combined Physical and genetic map of the Pseudomonas putida KT2440 chromosome. J. Bacteriol. 180: 6352-6363.
    • (1998) J. Bacteriol , vol.180 , pp. 6352-6363
    • Ramos-Díaz, M.A.1    Ramos, J.L.2
  • 31
    • 0345390247 scopus 로고    scopus 로고
    • Effect of high sugar concentration on nitrogenase activity of Acetobacter diazotrophicus
    • Reis VM, Döbereiner J. 1998. Effect of high sugar concentration on nitrogenase activity of Acetobacter diazotrophicus. Arch. Microbiol. 171: 13-18.
    • (1998) Arch. Microbiol , vol.171 , pp. 13-18
    • Reis, V.M.1    Döbereiner, J.2
  • 32
    • 0028119681 scopus 로고
    • Improved methodology for isolation and identification of Acetobacter diazotrophicus and confirmation of its endophytic habitat
    • Reis VM, Olivares FL, Döbereiner J. 1994. Improved methodology for isolation and identification of Acetobacter diazotrophicus and confirmation of its endophytic habitat. World J. Microb. Biot. 10: 401-405.
    • (1994) World J. Microb. Biot , vol.10 , pp. 401-405
    • Reis, V.M.1    Olivares, F.L.2    Döbereiner, J.3
  • 33
    • 0024840735 scopus 로고
    • A physical genome map of Pseudomonas aeruginosa PAO
    • Römling U, Grothues D, Bautsch W, Tümmler B. 1989. A physical genome map of Pseudomonas aeruginosa PAO. EMBO J. 8: 4081-4089.
    • (1989) EMBO J , vol.8 , pp. 4081-4089
    • Römling, U.1    Grothues, D.2    Bautsch, W.3    Tümmler, B.4
  • 36
    • 0026679994 scopus 로고
    • Contribution of nitrogen fixation to sugarcane: Nitrogen-15 and nitrogen-balance estimates
    • Urquiaga S, Cruz HS, Boddey RM. 1992. Contribution of nitrogen fixation to sugarcane: nitrogen-15 and nitrogen-balance estimates. Soil Sci. Soc. Am. J. 56: 105-114.
    • (1992) Soil Sci. Soc. Am. J , vol.56 , pp. 105-114
    • Urquiaga, S.1    Cruz, H.S.2    Boddey, R.M.3
  • 38
    • 0035891641 scopus 로고    scopus 로고
    • General method of rapid Smith/Birnstiel mapping adds for gap closure in shotgun microbial genome sequencing projects: Application to Pseudomonas putida KT2440
    • Weinel C, Tümmler B, Hilbert H, Nelson KE, Kiewitz C. 2001. General method of rapid Smith/Birnstiel mapping adds for gap closure in shotgun microbial genome sequencing projects: application to Pseudomonas putida KT2440. Nucleic Acids Res. 29: e110.
    • (2001) Nucleic Acids Res , vol.29
    • Weinel, C.1    Tümmler, B.2    Hilbert, H.3    Nelson, K.E.4    Kiewitz, C.5
  • 39
    • 0032987893 scopus 로고    scopus 로고
    • Genome size and macrorestriction map of Xanthomonas campestris pv. Glycines YR32 chromosome
    • Widjaja R, Suwanto A, Tjahjono B. 1999. Genome size and macrorestriction map of Xanthomonas campestris pv. Glycines YR32 chromosome. FEMS Microbiol. Lett. 175: 59-68.
    • (1999) FEMS Microbiol. Lett , vol.175 , pp. 59-68
    • Widjaja, R.1    Suwanto, A.2    Tjahjono, B.3
  • 40
    • 0034518221 scopus 로고    scopus 로고
    • The Oenococcus oeni genome: Physical and genetic mapping of strain GM and comparison with the genome of a divergent strain, PSU-1
    • Zé-Zé L, Tenreiro R, Paveia H. 2000. The Oenococcus oeni genome: physical and genetic mapping of strain GM and comparison with the genome of a divergent strain, PSU-1. Microbiology. 146: 3195-3204.
    • (2000) Microbiology , vol.146 , pp. 3195-3204
    • Zé-Zé, L.1    Tenreiro, R.2    Paveia, H.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.