메뉴 건너뛰기




Volumn 13, Issue 9 B, 2009, Pages 3918-3928

MicroRNA profiling of clear cell renal cell cancer identifies a robust signature to define renal malignancy

Author keywords

Clear cell renal cell carcinoma; Microarray; MicroRNA profiling; RT PCR

Indexed keywords

MICRORNA;

EID: 70350755290     PISSN: 15821838     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1582-4934.2009.00705.x     Document Type: Article
Times cited : (221)

References (54)
  • 1
    • 44849140454 scopus 로고    scopus 로고
    • MicroRNA signatures as diagnostic and therapeutic targets
    • Waldman SA, Terzic A. MicroRNA signatures as diagnostic and therapeutic targets. Clin Chem. 2008, 54:943-4.
    • (2008) Clin Chem. , vol.54 , pp. 943-944
    • Waldman, S.A.1    Terzic, A.2
  • 3
    • 18744396337 scopus 로고    scopus 로고
    • Frequent deletions and down-regulation of micro- RNA genes miR15 and miR16 at 13q14 in chronic lymphocytic leukemia
    • Calin GA, Dumitru CD, Shimizu M. Frequent deletions and down-regulation of micro- RNA genes miR15 and miR16 at 13q14 in chronic lymphocytic leukemia. Proc Natl Acad Sci USA. 2002, 99:15524-9.
    • (2002) Proc Natl Acad Sci USA. , vol.99 , pp. 15524-15529
    • Calin, G.A.1    Dumitru, C.D.2    Shimizu, M.3    et al4
  • 4
    • 33644819964 scopus 로고    scopus 로고
    • Unique microRNA molecular profiles in lung cancer diagnosis and prognosis
    • Yanaihara N, Caplen N, Bowman E. Unique microRNA molecular profiles in lung cancer diagnosis and prognosis. Cancer Cell. 2006, 9:189-98.
    • (2006) Cancer Cell. , vol.9 , pp. 189-198
    • Yanaihara, N.1    Caplen, N.2    Bowman, E.3    et al4
  • 5
    • 33750600178 scopus 로고    scopus 로고
    • MicroRNA expression abnormalities in pancreatic endocrine and acinar tumors are associated with distinctive pathologic features and clinical behavior
    • Roldo C, Missiaglia E, Hagan JP. MicroRNA expression abnormalities in pancreatic endocrine and acinar tumors are associated with distinctive pathologic features and clinical behavior. J Clin Oncol. 2006, 24:4677-84.
    • (2006) J Clin Oncol. , vol.24 , pp. 4677-4684
    • Roldo, C.1    Missiaglia, E.2    Hagan, J.P.3    et al4
  • 7
    • 23844555119 scopus 로고    scopus 로고
    • MicroRNA gene expression deregulation in human breast cancer
    • Iorio MV, Ferracin M, Liu CG. MicroRNA gene expression deregulation in human breast cancer. Cancer Res. 2005, 65:7065-70.
    • (2005) Cancer Res. , vol.65 , pp. 7065-7070
    • Iorio, M.V.1    Ferracin, M.2    Liu, C.G.3    et al4
  • 8
    • 33646157967 scopus 로고    scopus 로고
    • Comprehensive analysis of microRNA expression patterns in hepatocellular carcinoma and non-tumorous tissues
    • Murakami Y, Yasuda T, Saigo K. Comprehensive analysis of microRNA expression patterns in hepatocellular carcinoma and non-tumorous tissues. Oncogene. 2006, 25:2537-45.
    • (2006) Oncogene. , vol.25 , pp. 2537-2545
    • Murakami, Y.1    Yasuda, T.2    Saigo, K.3    et al4
  • 9
    • 40749090479 scopus 로고    scopus 로고
    • Widespread deregulation of microRNA expression in human prostate cancer
    • Ozen M, Creighton CJ, Ozdemir M. Widespread deregulation of microRNA expression in human prostate cancer. Oncogene. 2008, 27:1788-93.
    • (2008) Oncogene. , vol.27 , pp. 1788-1793
    • Ozen, M.1    Creighton, C.J.2    Ozdemir, M.3    et al4
  • 10
    • 40249107427 scopus 로고    scopus 로고
    • Changes in miRNA expression in solid tumors: an miRNA profiling in melanomas
    • Molnar V, Tamasi V, Bakos B. Changes in miRNA expression in solid tumors: an miRNA profiling in melanomas. Semin Cancer Biol. 2008, 18:111-22.
    • (2008) Semin Cancer Biol. , vol.18 , pp. 111-122
    • Molnar, V.1    Tamasi, V.2    Bakos, B.3    et al4
  • 11
    • 33846846397 scopus 로고    scopus 로고
    • MicroRNA and cancer: Current status and prospective
    • Wu W, Sun M, Zou GM. MicroRNA and cancer: Current status and prospective. Int J Cancer. 2007, 120:953-60.
    • (2007) Int J Cancer. , vol.120 , pp. 953-960
    • Wu, W.1    Sun, M.2    Zou, G.M.3    et al4
  • 12
    • 33750370444 scopus 로고    scopus 로고
    • MicroRNA signatures in human cancers
    • Calin GA, Croce CM. MicroRNA signatures in human cancers. Nat Rev Cancer. 2006, 6:857-66.
    • (2006) Nat Rev Cancer. , vol.6 , pp. 857-866
    • Calin, G.A.1    Croce, C.M.2
  • 13
    • 34247884391 scopus 로고    scopus 로고
    • Translating MicroRNA discovery into clinical biomarkers in cancer
    • Waldman SA, Terzic A. Translating MicroRNA discovery into clinical biomarkers in cancer. JAMA. 2007, 297:1923-5.
    • (2007) JAMA. , vol.297 , pp. 1923-1925
    • Waldman, S.A.1    Terzic, A.2
  • 14
    • 38749089854 scopus 로고    scopus 로고
    • MicroRNA expression profiles associated with prognosis and therapeutic outcome in colon adenocarcinoma
    • Schetter AJ, Leung SY, Sohn JJ. MicroRNA expression profiles associated with prognosis and therapeutic outcome in colon adenocarcinoma. JAMA. 2008, 299:425-36.
    • (2008) JAMA. , vol.299 , pp. 425-436
    • Schetter, A.J.1    Leung, S.Y.2    Sohn, J.J.3    et al4
  • 15
    • 72549100392 scopus 로고    scopus 로고
    • MicroRNAs and cancer: current state and future perspectives in urologic oncology
    • Epub ahead of print, December 29, doi
    • Schaefer A, Jung M, Kristiansen G. MicroRNAs and cancer: current state and future perspectives in urologic oncology. Urol Oncol. 2008, 10.1016/j.urolonc.2008.10.021, Epub ahead of print, December 29, doi
    • (2008) Urol Oncol.
    • Schaefer, A.1    Jung, M.2    Kristiansen, G.3    et al4
  • 17
    • 34548388833 scopus 로고    scopus 로고
    • Micro-RNA profiling in kidney and bladder cancers
    • Gottardo F, Liu CG, Ferracin M. Micro-RNA profiling in kidney and bladder cancers. Urol Oncol. 2007, 25:387-92.
    • (2007) Urol Oncol. , vol.25 , pp. 387-392
    • Gottardo, F.1    Liu, C.G.2    Ferracin, M.3    et al4
  • 18
    • 35548986535 scopus 로고    scopus 로고
    • Association of microRNA-34a overexpression with proliferation is cell type-dependent
    • Dutta KK, Zhong Y, Liu YT. Association of microRNA-34a overexpression with proliferation is cell type-dependent. Cancer Sci. 2007, 98:1845-52.
    • (2007) Cancer Sci. , vol.98 , pp. 1845-1852
    • Dutta, K.K.1    Zhong, Y.2    Liu, Y.T.3    et al4
  • 19
    • 20444460289 scopus 로고    scopus 로고
    • MicroRNA expression profiles classify human cancers
    • Lu J, Getz G, Miska EA. MicroRNA expression profiles classify human cancers. Nature. 2005, 435:834-8.
    • (2005) Nature. , vol.435 , pp. 834-838
    • Lu, J.1    Getz, G.2    Miska, E.A.3    et al4
  • 20
    • 24044534780 scopus 로고    scopus 로고
    • An optimized isolation and labeling platform for accurate microRNA expression profiling
    • Shingara J, Keiger K, Shelton J. An optimized isolation and labeling platform for accurate microRNA expression profiling. RNA. 2005, 11:1461-70.
    • (2005) RNA. , vol.11 , pp. 1461-1470
    • Shingara, J.1    Keiger, K.2    Shelton, J.3    et al4
  • 21
    • 84855306218 scopus 로고    scopus 로고
    • MicroRNA quantitation by TaqMan® real-time PCR
    • Clarke NJ, Sanseau P. editors, Eaglerville, DNA Press
    • Chen C, Guegler KJ. MicroRNA quantitation by TaqMan® real-time PCR. MicroRNAs: biology, function and expression 2007, 299-322. Clarke NJ, Sanseau P. In, editors, Eaglerville, DNA Press, pp
    • (2007) MicroRNAs: biology, function and expression , pp. 299-322
    • Chen, C.1    Guegler, K.J.2
  • 22
    • 57149115765 scopus 로고    scopus 로고
    • Genome-wide microRNA expression profiling in renal cell carcinoma: significant down-regulation of miR-141 and miR-200c
    • Nakada C, Matsuura K, Tsukamoto Y. Genome-wide microRNA expression profiling in renal cell carcinoma: significant down-regulation of miR-141 and miR-200c. J Pathol. 2008, 216:418-27.
    • (2008) J Pathol. , vol.216 , pp. 418-427
    • Nakada, C.1    Matsuura, K.2    Tsukamoto, Y.3    et al4
  • 23
    • 40849146967 scopus 로고    scopus 로고
    • Microarray analysis of MicroRNA expression in acute rejection after renal transplantation
    • Sui W, Dai Y, Huang Y. Microarray analysis of MicroRNA expression in acute rejection after renal transplantation. Transpl Immunol. 2008, 19:81-5.
    • (2008) Transpl Immunol. , vol.19 , pp. 81-85
    • Sui, W.1    Dai, Y.2    Huang, Y.3    et al4
  • 24
    • 33645763970 scopus 로고    scopus 로고
    • 2004 WHO classification of the renal tumors of the adults
    • Lopez-Beltran A, Scarpelli M, Montironi R. 2004 WHO classification of the renal tumors of the adults. Eur Urol. 2006, 49:798-805.
    • (2006) Eur Urol. , vol.49 , pp. 798-805
    • Lopez-Beltran, A.1    Scarpelli, M.2    Montironi, R.3    et al4
  • 25
    • 77449112489 scopus 로고    scopus 로고
    • Endogenous controls for real-time quantitation of miRNA using TaqMan® microRNA-assays
    • Application note 127AP11-01, Applied Biosystems
    • Wong L, Lee K, Russell I. Endogenous controls for real-time quantitation of miRNA using TaqMan® microRNA-assays. Application note 127AP11-01, Applied Biosystems
    • Wong, L.1    Lee, K.2    Russell, I.3    et al4
  • 26
    • 33745248430 scopus 로고    scopus 로고
    • MicroRNA target predictions in animals
    • Rajewsky N. microRNA target predictions in animals. Nat Genet. 2006, 38:S8-13.
    • (2006) Nat Genet. , vol.38
    • Rajewsky, N.1
  • 28
    • 38949111440 scopus 로고    scopus 로고
    • MicroRNAs as prognostic indicators and therapeutic targets: potential effect on breast cancer management
    • Lowery AJ, Miller N, McNeill RE. MicroRNAs as prognostic indicators and therapeutic targets: potential effect on breast cancer management. Clin Cancer Res. 2008, 14:360-5.
    • (2008) Clin Cancer Res. , vol.14 , pp. 360-365
    • Lowery, A.J.1    Miller, N.2    McNeill, R.E.3    et al4
  • 31
    • 0347201147 scopus 로고    scopus 로고
    • Multiclass cancer diagnosis using tumor gene expression signatures
    • Ramaswamy S, Tamayo P, Rifkin R. Multiclass cancer diagnosis using tumor gene expression signatures. Proc Natl Acad Sci USA. 2001, 98:15149-54.
    • (2001) Proc Natl Acad Sci USA. , vol.98 , pp. 15149-15154
    • Ramaswamy, S.1    Tamayo, P.2    Rifkin, R.3    et al4
  • 32
    • 43049103824 scopus 로고    scopus 로고
    • The miR-200 family and miR-205 regulate epithelial to mesenchymal transition by targeting ZEB1 and SIP1
    • Gregory PA, Bert AG, Paterson EL. The miR-200 family and miR-205 regulate epithelial to mesenchymal transition by targeting ZEB1 and SIP1. Nat Cell Biol. 2008, 10:593-601.
    • (2008) Nat Cell Biol. , vol.10 , pp. 593-601
    • Gregory, P.A.1    Bert, A.G.2    Paterson, E.L.3    et al4
  • 33
    • 47749137063 scopus 로고    scopus 로고
    • Molecular detection of neuron-specific ELAV-like-positive cells in the peripheral blood of patients with small-cell lung cancer
    • D'Alessandro V, Muscarella LA, Copetti M. Molecular detection of neuron-specific ELAV-like-positive cells in the peripheral blood of patients with small-cell lung cancer. Cell Oncol. 2008, 30:291-7.
    • (2008) Cell Oncol. , vol.30 , pp. 291-297
    • D'Alessandro, V.1    Muscarella, L.A.2    Copetti, M.3    et al4
  • 34
    • 49149121975 scopus 로고    scopus 로고
    • PCDH8, the human homolog of PAPC, is a candidate tumor suppressor of breast cancer
    • Yu JS, Koujak S, Nagase S. PCDH8, the human homolog of PAPC, is a candidate tumor suppressor of breast cancer. Oncogene. 2008, 27:4657-65.
    • (2008) Oncogene. , vol.27 , pp. 4657-4665
    • Yu, J.S.1    Koujak, S.2    Nagase, S.3    et al4
  • 35
    • 33749479908 scopus 로고    scopus 로고
    • Downregulation of miR-122 in the rodent and human hepatocellular carcinomas
    • Kutay H, Bai S, Datta J. Downregulation of miR-122 in the rodent and human hepatocellular carcinomas. J Cell Biochem. 2006, 99:671-8.
    • (2006) J Cell Biochem. , vol.99 , pp. 671-678
    • Kutay, H.1    Bai, S.2    Datta, J.3    et al4
  • 36
    • 22244467087 scopus 로고    scopus 로고
    • MicroRNA-21 is an antiapoptotic factor in human glioblastoma cells
    • Chan JA, Krichevsky AM, Kosik KS. MicroRNA-21 is an antiapoptotic factor in human glioblastoma cells. Cancer Res. 2005, 65:6029-33.
    • (2005) Cancer Res. , vol.65 , pp. 6029-6033
    • Chan, J.A.1    Krichevsky, A.M.2    Kosik, K.S.3
  • 37
    • 34347266556 scopus 로고    scopus 로고
    • MicroRNA-21 targets the tumor suppressor gene tropomyosin 1 (TPM1)
    • Zhu S, Si ML, Wu H. MicroRNA-21 targets the tumor suppressor gene tropomyosin 1 (TPM1). J Biol Chem. 2007, 282:14328-36.
    • (2007) J Biol Chem. , vol.282 , pp. 14328-14336
    • Zhu, S.1    Si, M.L.2    Wu, H.3    et al4
  • 38
    • 0034614637 scopus 로고    scopus 로고
    • The hallmarks of cancer
    • Hanahan D, Weinberg RA. The hallmarks of cancer. Cell. 2000, 100:57-70.
    • (2000) Cell. , vol.100 , pp. 57-70
    • Hanahan, D.1    Weinberg, R.A.2
  • 39
    • 33144490646 scopus 로고    scopus 로고
    • A microRNA expression signature of human solid tumors defines cancer gene targets
    • Volinia S, Calin GA, Liu CG. A microRNA expression signature of human solid tumors defines cancer gene targets. Proc Natl Acad Sci USA. 2006, 103:2257-61.
    • (2006) Proc Natl Acad Sci USA. , vol.103 , pp. 2257-2261
    • Volinia, S.1    Calin, G.A.2    Liu, C.G.3    et al4
  • 40
    • 0036229658 scopus 로고    scopus 로고
    • Avian bic, a gene isolated from a common retroviral site in avian leukosis virus-induced lymphomas that encodes a noncoding RNA, cooperates with c-myc in lymphomagenesis and erythroleukemogenesis
    • Tam W, Hughes SH, Hayward WS. Avian bic, a gene isolated from a common retroviral site in avian leukosis virus-induced lymphomas that encodes a noncoding RNA, cooperates with c-myc in lymphomagenesis and erythroleukemogenesis. J Virol. 2002, 76:4275-86.
    • (2002) J Virol. , vol.76 , pp. 4275-4286
    • Tam, W.1    Hughes, S.H.2    Hayward, W.S.3    et al4
  • 41
    • 14844354250 scopus 로고    scopus 로고
    • Accumulation of miR-155 and BIC RNA in human B cell lymphomas
    • Eis PS, Tam W, Sun L. Accumulation of miR-155 and BIC RNA in human B cell lymphomas. Proc Natl Acad Sci USA. 2005, 102:3627-32.
    • (2005) Proc Natl Acad Sci USA. , vol.102 , pp. 3627-3632
    • Eis, P.S.1    Tam, W.2    Sun, L.3    et al4
  • 42
    • 26044481464 scopus 로고    scopus 로고
    • BIC and miR-155 are highly expressed in Hodgkin, primary mediastinal and diffuse large B cell lymphomas
    • Kluiver J, Poppema S, de Jong D. BIC and miR-155 are highly expressed in Hodgkin, primary mediastinal and diffuse large B cell lymphomas. J Pathol. 2005, 207:243-9.
    • (2005) J Pathol. , vol.207 , pp. 243-249
    • Kluiver, J.1    Poppema, S.2    de Jong, D.3    et al4
  • 43
    • 35948944355 scopus 로고    scopus 로고
    • High-throughput microRNAome analysis in human germ cell tumours
    • Gillis AJ, Stoop HJ, Hersmus R. High-throughput microRNAome analysis in human germ cell tumours. J Pathol. 2007, 213:319-28.
    • (2007) J Pathol. , vol.213 , pp. 319-328
    • Gillis, A.J.1    Stoop, H.J.2    Hersmus, R.3    et al4
  • 44
    • 2542626605 scopus 로고    scopus 로고
    • Reduced expression of the let-7 microRNAs in human lung cancers in association with shortened postoperative survival
    • Takamizawa J, Konishi H, Yanagisawa K. Reduced expression of the let-7 microRNAs in human lung cancers in association with shortened postoperative survival. Cancer Res. 2004, 64:3753-6.
    • (2004) Cancer Res. , vol.64 , pp. 3753-3756
    • Takamizawa, J.1    Konishi, H.2    Yanagisawa, K.3    et al4
  • 46
    • 0036718539 scopus 로고    scopus 로고
    • Molecular basis of the VHL hereditary cancer syndrome
    • Kaelin WG. Molecular basis of the VHL hereditary cancer syndrome. Nat Rev Cancer. 2002, 2:673-82.
    • (2002) Nat Rev Cancer. , vol.2 , pp. 673-682
    • Kaelin, W.G.1
  • 47
    • 40949137731 scopus 로고    scopus 로고
    • Hsa-miR-210 is induced by hypoxia and is an independent prognostic factor in breast cancer
    • Camps C, Buffa FM, Colella S. hsa-miR-210 is induced by hypoxia and is an independent prognostic factor in breast cancer. Clin Cancer Res. 2008, 14:1340-8.
    • (2008) Clin Cancer Res. , vol.14 , pp. 1340-1348
    • Camps, C.1    Buffa, F.M.2    Colella, S.3    et al4
  • 48
    • 47049119934 scopus 로고    scopus 로고
    • MicroRNA-210 modulates endothelial cell response to hypoxia and inhibits the receptor tyrosine kinase ligand Ephrin-A3
    • Fasanaro P, D'Alessandra Y, Di S. MicroRNA-210 modulates endothelial cell response to hypoxia and inhibits the receptor tyrosine kinase ligand Ephrin-A3. J Biol Chem. 2008, 283:15878-83.
    • (2008) J Biol Chem. , vol.283 , pp. 15878-15883
    • Fasanaro, P.1    D'Alessandra, Y.2    Di, S.3    et al4
  • 49
    • 49949117302 scopus 로고    scopus 로고
    • Widespread changes in protein synthesis induced by microRNAs
    • Selbach M, Schwanhausser B, Thierfelder N. Widespread changes in protein synthesis induced by microRNAs. Nature. 2008, 455:58-63.
    • (2008) Nature. , vol.455 , pp. 58-63
    • Selbach, M.1    Schwanhausser, B.2    Thierfelder, N.3    et al4
  • 50
    • 42449098100 scopus 로고    scopus 로고
    • Normalization of microRNA expression levels in quantitative RT-PCR assays: identification of suitable reference RNA targets in normal and cancerous human solid tissues
    • Peltier HJ, Latham GJ. Normalization of microRNA expression levels in quantitative RT-PCR assays: identification of suitable reference RNA targets in normal and cancerous human solid tissues. RNA. 2008, 14:844-52.
    • (2008) RNA. , vol.14 , pp. 844-852
    • Peltier, H.J.1    Latham, G.J.2
  • 51
    • 33847009923 scopus 로고    scopus 로고
    • Differential patterns of microRNA expression in neuroblastoma are correlated with prognosis, differentiation, and apoptosis
    • Chen Y, Stallings RL. Differential patterns of microRNA expression in neuroblastoma are correlated with prognosis, differentiation, and apoptosis. Cancer Res. 2007, 67:976-83.
    • (2007) Cancer Res. , vol.67 , pp. 976-983
    • Chen, Y.1    Stallings, R.L.2
  • 52
    • 34548687035 scopus 로고    scopus 로고
    • Mir-29 regulates Mcl-1 protein expression and apoptosis
    • Mott JL, Kobayashi S, Bronk SF. mir-29 regulates Mcl-1 protein expression and apoptosis. Oncogene. 2007, 26:6133-40.
    • (2007) Oncogene. , vol.26 , pp. 6133-6140
    • Mott, J.L.1    Kobayashi, S.2    Bronk, S.F.3    et al4
  • 53
    • 35948975794 scopus 로고    scopus 로고
    • MicroRNAs (miR)-221 and miR-222, both overexpressed in human thyroid papillary carcinomas, regulate p27Kip1 protein levels and cell cycle
    • Visone R, Russo L, Pallante P. MicroRNAs (miR)-221 and miR-222, both overexpressed in human thyroid papillary carcinomas, regulate p27Kip1 protein levels and cell cycle. Endocr Relat Cancer. 2007, 14:791-8.
    • (2007) Endocr Relat Cancer. , vol.14 , pp. 791-798
    • Visone, R.1    Russo, L.2    Pallante, P.3    et al4
  • 54
    • 28444469246 scopus 로고    scopus 로고
    • Silencing of microRNAs in vivo with 'antagomirs'
    • Krutzfeldt J, Rajewsky N, Braich R. Silencing of microRNAs in vivo with 'antagomirs'. Nature. 2005, 438:685-9.
    • (2005) Nature. , vol.438 , pp. 685-689
    • Krutzfeldt, J.1    Rajewsky, N.2    Braich, R.3    et al4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.