Two new splice variants in porcine PPARGC1A

BMC Research Notes

Volumn 1, Issue , 2008, Pages

  Erkens, Tim ^a   Bilek, Karel ^b   Van Zeveren, Alex ^a   Peelman, Luc J ^a  

^a GHENT UNIVERSITY   (Belgium)

^b MENDEL UNIVERSITY IN BRNO   (Czech Republic)

Author keywords

[No Author keywords available]

Indexed keywords

SUIDAE; SUS;

EID: 70350683955     PISSN: None     EISSN: 17560500     Source Type: Journal    
DOI: 10.1186/1756-0500-1-138     Document Type: Article

References (28)

1. A cold-inducible coactivator of nuclear receptors linked to adaptive thermogenesis. P Puigserver Z Wu CW Park R Graves M Wright BM Spiegelman, Cell 1998 92 829 839 10.1016/S0092-8674(00)81410-5 9529258
2. Regulation of adipogenesis and energy balance by PPAR and PGC-1. BM Spiegelman P Puigserver Z Wu, Int J Obes Relat Metab Disord 2000 24 Suppl 4 8 S10 11126248
3. Control of hepatic gluconeogenesis through the transcriptional coactivator PGC-1. JC Yoon P Puigserver GX Chen J Donovan ZD Wu J Rhee G Adelmant J Stafford CR Kahn DK Granner CB Newgard BM Spiegelman, Nature 2001 413 131 138 10.1038/35093050 11557972 (Pubitemid 32867868)
4. Adipogenesis and lipotoxicity: role of peroxisome proliferator-activated receptor (PPAR) and PPAR coactivator-1 (PGC1). G Medina-Gomez S Gray A Vidal-Puig, Public Health Nutr 2007 10 1132 1137 10.1017/S1368980007000614 17903321
5. HIF-independent regulation of VEGF and angiogenesis by the transcriptional coactivator PGC-1 Z Arany SY Foo Y Ma JL Ruas A Bommi-Reddy G Girnun M Cooper D Laznik J Chinsomboon SM Rangwala KH Baek A Rosenzweig BM Spiegelman, Nature 2008 451 1008 1012 10.1038/nature06613 18288196
6. Cloning and mRNA tissue distribution of human PPAR coactivator-1. D Larrouy H Vidal F Andreelli M Laville D Langin, Int J Obesity 1999 23 1327 1332 10.1038/sj.ijo.0801106
7. Uncoupling proteins: their roles in adaptive thermogenesis and substrate metabolism reconsidered. AG Dulloo S Samec, Br J Nutr 2001 86 123 139 10.1079/BJN2001412 11502224
8. Transcriptional co-activator PGC-1 drives the formation of slow-twitch muscle fibres. J Lin H Wu PT Tarr C-Y Zhang Z Wu O Boss LF Michael P Puigserver E Isotani EN Olson BB Lowell R Bassel-Duby BM Spiegelman, Nature 2002 418 797 801 10.1038/nature00904 12181572
9. PGC-1 and PGC-1 have both similar and distinct effects on myofiber switching toward an oxidative phenotype. OH Mortensen L Frandsen P Schjerling E Nishimura N Grunnet, Am J Physiol-Endocrinol Metab 2006 291 807 816 10.1152/ajpendo.00591.2005 16720625
10. Frequency distribution of a Cys430Ser polymorphism in peroxisome proliferator-activated receptor- coactivator-1 (PPARGC1) gene sequence in Chinese and Western pig breeds. T Kunej XL Wu TM Berlic JJ Michal Z Jiang P Dovc, J Anim Breed Genet 2005 122 7 11 10.1111/j.1439-0388.2004.00498.x 16130483
11. Porcine PPARGC1A (peroxisome proliferative activated receptor gamma coactivator 1A): coding sequence, genomic organization, polymorphisms and mapping. K Jacobs G Rohrer M Van Poucke F Piumi M Yerle H Barthenschlager M Mattheeuws A Van Zeveren LJ Peelman, Cytogenet Genome Res 2006 112 106 113 10.1159/000087521 16276098
12. SNPs in the porcine PPARGC1a gene: interbreed differences and their phenotypic effects. M Stachowiak M Szydlowski J Cieslak M Switonski, Cell Mol Biol Lett 2007 12 231 239 10.2478/s11658-006-0066-7 17149556
13. Identification of quantitative trait loci affecting carcass composition in swine: I. Fat deposition traits. GA Rohrer JW Keele, J Anim Sci 1998 76 2247 2254 9781479
14. Restoration of insulin-sensitive glucose transporter (GLUT4) gene expression in muscle cells by the transcriptional coactivator PGC-1. LF Michael Z Wu RB Cheatham P Puigserver G Adelmant JJ Lehman DP Kelly BM Spiegelman, Proc Natl Acad Sci USA 2001 98 3820 3825 11274399 10.1073/pnas.061035098 (Pubitemid 32249855)
15. Development of a new set of reference genes for normalization of real-time RT-PCR data of porcine backfat and longissimus dorsi muscle, and evaluation with PPARGC1A. T Erkens M van Poucke J Vandesompele K Goossens A Van Zeveren LJ Peelman, BMC Biotechnol 2006 6 41 17026777 10.1186/1472-6750-6-41 (Pubitemid 44608339)
16. Preovulatory follicular fluid during in vitro maturation decreases polyspermic fertilization of cumulus-intact porcine oocytes in vitro maturation of porcine oocytes. J Bijttebier A Van Soom E Meyer B Mateusen D Maes, Theriogenology 2008 70 715 724 10.1016/j.theriogenology.2008.04.046 18572236
17. National Center for Biotechnology Information. http://www.ncbi.nlm.nih. gov
18. Primer3 on the WWW for general users and for biologist programmers. S Rozen HJ Skaletsky, Bioinformatics Methods and Protocols: Methods in Molecular Biology Totowa: Humana Press, Krawetz S, Misener S, 2000 365 386 http://frodo.wi.mit.edu/cgi-bin/primer3/primer3-www.cgi
19. Mfold web server for nucleic acid folding and hybridization prediction. M Zuker, Nucleic Acids Res 2003 31 3406 3415 http://frontend.bioinfo.rpi.edu/ applications/mfold/cgi-bin/dna-form1.cgi 12824337 10.1093/nar/gkg595 (Pubitemid 37442169)
20. Basic local alignment search tool. SF Altschul W Gish W Miller EW Myers DJ Lipman, J Mol Biol 1990 215 403 410 http://www.ncbi.nlm.nih.gov/blast 2231712
21. Role of leptin in peroxisome proliferator-activated receptor gamma coactivator-1 expression. T Kakuma Z-W Wang W Pan RH Unger Y-T Zhou, Endocrinology 2000 141 4576 4582 10.1210/en.141.12.4576 11108270
22. Adaptations of skeletal muscle to exercise: rapid increase in the transcriptional coactivator PGC-1. K Baar AR Wende TE Jones M Marison LA Nolte M Chen DP Kelly JO Holloszy, FASEB J 2002 16 1879 1886 10.1096/fj.02-0367com 12468452
23. Mechanisms controlling mitochondrial biogenesis and respiration through the thermogenic coactivator PGC-1. Z Wu P Puigserver U Andersson C Zhang G Adelmant V Mootha A Troy S Cinti B Lowell RC Scarpulla BM Spiegelman, Cell 1999 98 115 124 10.1016/S0092-8674(00)80611-X 10412986
24. Peroxisome proliferator-activated receptor- coactivator 1 (PGC-1): transcriptional coactivator and metabolic regulator. P Puigserver BM Spiegelman, Endocr Rev 2003 24 78 90 10.1210/er.2002-0012 12588810
25. Intramolecular control of protein stability, subnuclear compartmentalization, and coactivator function of peroxisome proliferator-activated receptor coactivator 1 M Sano S Tokudome N Shimizu N Yoshikawa C Ogawa K Shirakawa J Endo T Katayama S Yuasa M Ieda S Makino F Hattori H Tanaka K Fukuda, J Biol Chem 2007 282 25970 25980 10.1074/jbc. M703634200 17620342
26. Mutation analysis of peroxisome proliferator activated receptor- coactivator-1 (PGC-1) and relationships of identified amino acid polymorphisms to type II diabetes mellitus. J Ek G Andersen SA Urhammer PH Gæde T Drivshom K Borch-Johnsen T Hansen O Pedersen, Diabetologia 2001 44 2220 2226 10.1007/s001250100032 11793024
27. Reduced expression of PGC-1 and insulin-signaling molecules in adipose tissue is associated with insulin resistance. A Hammarstedt P-A Jansson C Wesslau X Yang U Smith, Biochem Biophys Res Commun 2003 301 578 582 10.1016/S0006-291X(03)00014-7 12565902
28. Suppression of reactive oxygen species and neurodegeneration by the PGC-1 transcriptional activators. J St-Pierre S Drori M Uldry JM Silvaggi J Rhee S Jäger C Handschin K Zheng J Lin W Yang DK Simon R Bachoo BM Spiegelman, Cell 2006 127 397 408 10.1016/j.cell.2006.09.024 17055439