Precursor Ion Independent Algorithm for Top-Down Shotgun Proteomics

Journal of the American Society for Mass Spectrometry

Volumn 20, Issue 11, 2009, Pages 2154-2166

  Tsai, Yihsuan S ^a   Scherl, Alexander ^a   Shaw, Jason L ^a   MacKay, C Logan ^b   Shaffer, Scott A ^a   Langridge Smith, Patrick R R ^b   Goodlett, David R ^a  

^a UNIVERSITY OF WASHINGTON   (United States)

^b UNIVERSITY OF EDINBURGH   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

BOTTOM-UP ANALYSIS; COLLISION INDUCED DISSOCIATION; FALSE DISCOVERY RATE; GASPHASE; GENOMIC SEQUENCE DATABASE; ISOFORMS; LINEAR ION TRAP; MASS ANALYZERS; ORBITRAP; OUTER MEMBRANE; POST-TRANSLATION MODIFICATION; PROTEIN IDENTIFICATION; PROTEIN PRECURSORS; SALMONELLA TYPHIMURIUM; SHOTGUN PROTEOMICS; TANDEM MASS SPECTRA; TOP-DOWN ALGORITHMS; TOPDOWN;

IONS; MASS SPECTROMETERS; MASS SPECTROMETRY; MOLECULAR BIOLOGY;

PROTEINS;

ISOPROTEIN; OUTER MEMBRANE PROTEIN;

ALGORITHM; AMINO ACID SEQUENCE; ARTICLE; AUTOMATION; COLLISIONALLY ACTIVATED DISSOCIATION; CONTROLLED STUDY; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; MASS SPECTROMETER; NONHUMAN; NUCLEOTIDE SEQUENCE; PROTEIN ANALYSIS; PROTEIN PROCESSING; PROTEOMICS; SALMONELLA TYPHIMURIUM; SEQUENCE DATABASE; TANDEM MASS SPECTROMETRY;

ACETYLATION; ALGORITHMS; AMINO ACID SEQUENCE; ANIMALS; BACTERIAL OUTER MEMBRANE PROTEINS; BACTERIAL PROTEINS; CATTLE; CELL EXTRACTS; CHICKENS; CHROMATOGRAPHY, HIGH PRESSURE LIQUID; DATABASES, PROTEIN; HISTONES; IONS; MASS SPECTROMETRY; MOLECULAR SEQUENCE DATA; MOLECULAR WEIGHT; PROTEIN ISOFORMS; PROTEIN PROCESSING, POST-TRANSLATIONAL; PROTEINS; PROTEOME; PROTEOMICS; REFERENCE STANDARDS; REPRODUCIBILITY OF RESULTS; ROC CURVE; SALMONELLA TYPHIMURIUM; TANDEM MASS SPECTROMETRY;

SALMONELLA TYPHIMURIUM;

EID: 70349769453     PISSN: 10440305     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jasms.2009.07.024     Document Type: Article

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