메뉴 건너뛰기




Volumn 19, Issue 6, 2008, Pages 891-901

On the Benefits of Acquiring Peptide Fragment Ions at High Measured Mass Accuracy

Author keywords

[No Author keywords available]

Indexed keywords

DATA ACQUISITION; DATABASE SYSTEMS; DISSOCIATION; FOURIER TRANSFORMS; MASS SPECTROMETRY;

EID: 43549089469     PISSN: 10440305     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jasms.2008.02.005     Document Type: Article
Times cited : (44)

References (23)
  • 3
    • 23944490667 scopus 로고    scopus 로고
    • Increased Protein Identification Capabilities Through Novel Tandem MS Calibration Strategies
    • Wu S., Kaiser N.K., Meng D., Anderson G.A., Zhang K., and Bruce J.E. Increased Protein Identification Capabilities Through Novel Tandem MS Calibration Strategies. J. Proteome Res 4 (2005) 1434-1441
    • (2005) J. Proteome Res , vol.4 , pp. 1434-1441
    • Wu, S.1    Kaiser, N.K.2    Meng, D.3    Anderson, G.A.4    Zhang, K.5    Bruce, J.E.6
  • 5
    • 0842285056 scopus 로고
    • The Interpretation of Collision-Induced Dissociation Tandem Mass Spectra of Peptides
    • Papayannopoulos I.A. The Interpretation of Collision-Induced Dissociation Tandem Mass Spectra of Peptides. Mass Spectrom. Rev 14 (1995) 49-73
    • (1995) Mass Spectrom. Rev , vol.14 , pp. 49-73
    • Papayannopoulos, I.A.1
  • 6
    • 0029717657 scopus 로고    scopus 로고
    • High Sensitivity Collisionally-Activated Decomposition Tandem Mass Spectrometry on a Novel Quadrupole/Orthogonal-acceleration Time-of-Flight Mass Spectrometer
    • Morris H.R., Dell A., Langhorne J., Berg M., Bordoli R.S., Hoyes J., and Bateman R.H. High Sensitivity Collisionally-Activated Decomposition Tandem Mass Spectrometry on a Novel Quadrupole/Orthogonal-acceleration Time-of-Flight Mass Spectrometer. Rapid Commun. Mass Spectrom 10 (1996) 889-896
    • (1996) Rapid Commun. Mass Spectrom , vol.10 , pp. 889-896
    • Morris, H.R.1    Dell, A.2    Langhorne, J.3    Berg, M.4    Bordoli, R.S.5    Hoyes, J.6    Bateman, R.H.7
  • 7
    • 0035561113 scopus 로고    scopus 로고
    • Controlled Ion Fragmentation in a 2-D Quadrupole Ion Trap for External Ion Accumulation in ESI FTICR Mass Spectrometry
    • Belov M.E., Gorshkov M.V., Udseth H.R., and Smith R.D. Controlled Ion Fragmentation in a 2-D Quadrupole Ion Trap for External Ion Accumulation in ESI FTICR Mass Spectrometry. J. Am. Soc. Mass Spectrom 12 (2001) 1312-1319
    • (2001) J. Am. Soc. Mass Spectrom , vol.12 , pp. 1312-1319
    • Belov, M.E.1    Gorshkov, M.V.2    Udseth, H.R.3    Smith, R.D.4
  • 8
    • 33745264884 scopus 로고    scopus 로고
    • Dynamic Range of Mass Accuracy in LTQ Orbitrap Hybrid Mass Spectrometer
    • Makarov A., Denisov E., Lange O., and Horning S. Dynamic Range of Mass Accuracy in LTQ Orbitrap Hybrid Mass Spectrometer. J. Am. Soc. Mass Spectrom 17 (2006) 977-982
    • (2006) J. Am. Soc. Mass Spectrom , vol.17 , pp. 977-982
    • Makarov, A.1    Denisov, E.2    Lange, O.3    Horning, S.4
  • 9
    • 33646899550 scopus 로고    scopus 로고
    • Top-down protein sequencing and MS3 on a hybrid linear quadrupole ion trap-orbitrap mass spectrometer
    • Macek B., Waanders L.F., Olsen J.V., and Mann M. Top-down protein sequencing and MS3 on a hybrid linear quadrupole ion trap-orbitrap mass spectrometer. Mol. Cell Proteomics 5 (2006) 949-958
    • (2006) Mol. Cell Proteomics , vol.5 , pp. 949-958
    • Macek, B.1    Waanders, L.F.2    Olsen, J.V.3    Mann, M.4
  • 10
    • 33846488609 scopus 로고    scopus 로고
    • Mass Spectrometric Mapping of Linker Histone H1 Variants Reveals Multiple Acetylations, Methylations, and Phosphorylation as Well as Differences Between Cell Culture and Tissue
    • Wisniewski J.R., Zougman A., Kruger S., and Mann M. Mass Spectrometric Mapping of Linker Histone H1 Variants Reveals Multiple Acetylations, Methylations, and Phosphorylation as Well as Differences Between Cell Culture and Tissue. Mol. Cell. Proteom 6 (2007) 72-87
    • (2007) Mol. Cell. Proteom , vol.6 , pp. 72-87
    • Wisniewski, J.R.1    Zougman, A.2    Kruger, S.3    Mann, M.4
  • 11
    • 0000857494 scopus 로고
    • An Approach to Correlate Tandem Mass Spectral Data of Peptides with Amino Acid Sequences in a Protein Database
    • Eng J.K., McCormack A.L., and Yates J.R. An Approach to Correlate Tandem Mass Spectral Data of Peptides with Amino Acid Sequences in a Protein Database. J. Am. Soc. Mass Spectrom 5 (1994) 976-989
    • (1994) J. Am. Soc. Mass Spectrom , vol.5 , pp. 976-989
    • Eng, J.K.1    McCormack, A.L.2    Yates, J.R.3
  • 12
    • 0033434080 scopus 로고    scopus 로고
    • Probability-Based Protein Identification by Searching Sequence Databases Using Mass Spectrometry Data
    • Perkins D.N., Pappin D.J., Creasy D.M., and Cottrell J.S. Probability-Based Protein Identification by Searching Sequence Databases Using Mass Spectrometry Data. Electrophoresis 20 (1999) 3551-3567
    • (1999) Electrophoresis , vol.20 , pp. 3551-3567
    • Perkins, D.N.1    Pappin, D.J.2    Creasy, D.M.3    Cottrell, J.S.4
  • 13
    • 0036211823 scopus 로고    scopus 로고
    • RADARS, a Bioinformatics Solution that Automates Proteome Mass Spectral Analysis, Optimizes Protein Identification, and Archives Data in a Relational Database
    • Field H.I., Fenyo D., and Beavis R.C. RADARS, a Bioinformatics Solution that Automates Proteome Mass Spectral Analysis, Optimizes Protein Identification, and Archives Data in a Relational Database. Proteomics 2 (2002) 36-47
    • (2002) Proteomics , vol.2 , pp. 36-47
    • Field, H.I.1    Fenyo, D.2    Beavis, R.C.3
  • 14
    • 0041358793 scopus 로고    scopus 로고
    • OLAV: Towards High-Throughput Tandem Mass Spectrometry Data Identification
    • Colinge J., Masselot A., Giron M., Dessingy T., and Magnin J. OLAV: Towards High-Throughput Tandem Mass Spectrometry Data Identification. Proteomics 3 (2003) 1454-1463
    • (2003) Proteomics , vol.3 , pp. 1454-1463
    • Colinge, J.1    Masselot, A.2    Giron, M.3    Dessingy, T.4    Magnin, J.5
  • 15
    • 0035356597 scopus 로고    scopus 로고
    • Accurate Mass Liquid Chromatography/Mass Spectrometry on Quadrupole Orthogonal Acceleration Time-of-Flight Mass Analyzers Using Switching between Separate Sample and Reference Sprays. II. Applications Using the Dual-Electrospray Ion Source
    • Wolff J.C., Eckers C., Sage A.B., Giles K., and Bateman R. Accurate Mass Liquid Chromatography/Mass Spectrometry on Quadrupole Orthogonal Acceleration Time-of-Flight Mass Analyzers Using Switching between Separate Sample and Reference Sprays. II. Applications Using the Dual-Electrospray Ion Source. Anal. Chem 73 (2001) 2605-2612
    • (2001) Anal. Chem , vol.73 , pp. 2605-2612
    • Wolff, J.C.1    Eckers, C.2    Sage, A.B.3    Giles, K.4    Bateman, R.5
  • 16
    • 0034663111 scopus 로고    scopus 로고
    • Accurate Mass Liquid Chromatography/Mass Spectrometry on Orthogonal Acceleration Time-of-Flight Mass Analyzers Using Switching Between Separate Sample and Reference Sprays. I. Proof of Concept
    • Eckers C., Wolff J.C., Haskins N.J., Sage A.B., Giles K., and Bateman R. Accurate Mass Liquid Chromatography/Mass Spectrometry on Orthogonal Acceleration Time-of-Flight Mass Analyzers Using Switching Between Separate Sample and Reference Sprays. I. Proof of Concept. Anal. Chem 72 (2000) 3683-3688
    • (2000) Anal. Chem , vol.72 , pp. 3683-3688
    • Eckers, C.1    Wolff, J.C.2    Haskins, N.J.3    Sage, A.B.4    Giles, K.5    Bateman, R.6
  • 17
    • 2342593352 scopus 로고    scopus 로고
    • De Novo Sequencing, Peptide Composition Analysis, and Composition-Based Sequencing: A New Strategy Employing Accurate Mass Determination by Fourier Transform Ion Cyclotron Resonance Mass Spectrometry
    • Spengler B. De Novo Sequencing, Peptide Composition Analysis, and Composition-Based Sequencing: A New Strategy Employing Accurate Mass Determination by Fourier Transform Ion Cyclotron Resonance Mass Spectrometry. J. Am. Soc. Mass Spectrom 15 (2004) 703-714
    • (2004) J. Am. Soc. Mass Spectrom , vol.15 , pp. 703-714
    • Spengler, B.1
  • 18
    • 2442712881 scopus 로고    scopus 로고
    • Impact of Ion Trap Tandem Mass Spectra Variability on the Identification of Peptides
    • Venable J.D., and Yates III J.R. Impact of Ion Trap Tandem Mass Spectra Variability on the Identification of Peptides. Anal. Chem 76 (2004) 2928-2937
    • (2004) Anal. Chem , vol.76 , pp. 2928-2937
    • Venable, J.D.1    Yates III, J.R.2
  • 19
    • 33847630405 scopus 로고    scopus 로고
    • Target-Decoy Search Strategy for Increased Confidence in Large-Scale Protein Identifications by Mass Spectrometry
    • Elias J.E., and Gygi S.P. Target-Decoy Search Strategy for Increased Confidence in Large-Scale Protein Identifications by Mass Spectrometry. Nat. Methods 4 (2007) 207-214
    • (2007) Nat. Methods , vol.4 , pp. 207-214
    • Elias, J.E.1    Gygi, S.P.2
  • 20
    • 0038047148 scopus 로고    scopus 로고
    • Popitam: Towards New Heuristic Strategies to Improve Protein Identification from Tandem Mass Spectrometry data
    • Hernandez P., Gras R., Frey J., and Appel R.D. Popitam: Towards New Heuristic Strategies to Improve Protein Identification from Tandem Mass Spectrometry data. Proteomics 3 (2003) 870-878
    • (2003) Proteomics , vol.3 , pp. 870-878
    • Hernandez, P.1    Gras, R.2    Frey, J.3    Appel, R.D.4
  • 22
    • 0031014649 scopus 로고    scopus 로고
    • The Quadrupole Ion Trap Mass Spectrometer-a Small Solution to a Big Challenge
    • Jonscher K.R., and Yates III J.R. The Quadrupole Ion Trap Mass Spectrometer-a Small Solution to a Big Challenge. Anal. Biochem 244 (1997) 1-15
    • (1997) Anal. Biochem , vol.244 , pp. 1-15
    • Jonscher, K.R.1    Yates III, J.R.2
  • 23
    • 43549125616 scopus 로고    scopus 로고
    • Macek, B.; Olsen, J. V.; Zhang, Y. Mann, M. Assessment of High Versus Low Mass Accuracy MS/MS for Complex Mixture Analysis in Proteomics. Poster Presentation. Proceedings of the American Society of Mass Spectrometry; San Antonio, TX, June 2005.
    • Macek, B.; Olsen, J. V.; Zhang, Y. Mann, M. Assessment of High Versus Low Mass Accuracy MS/MS for Complex Mixture Analysis in Proteomics. Poster Presentation. Proceedings of the American Society of Mass Spectrometry; San Antonio, TX, June 2005.


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.