Crystallographic snapshots of iterative substrate translocations during nicotianamine synthesis in archaea

Proceedings of the National Academy of Sciences of the United States of America

Volumn 106, Issue 38, 2009, Pages 16180-16184

  Dreyfus, Cyril ^a,b,c   Lemaire, David ^a,b,c   Mari, Stéphane ^d   Pignol, David ^a,b,c   Arnoux, Pascal ^a,b,c  

^a IRFM   (France)

^b CNRS   (France)

^c AIX MARSEILLE UNIVERSITY   (France)

^d UNIV MONTPELLIER   (France)

Author keywords

Metal homeostasis; Reaction mechanism

Indexed keywords

METAL CHELATE; NICOTIANAMINE; UNCLASSIFIED DRUG;

ARCHAEBACTERIUM; ARTICLE; CRYSTAL STRUCTURE; CRYSTALLOGRAPHY; ENZYME SUBSTRATE COMPLEX; PRIORITY JOURNAL;

ARCHAEA; METHANOTHERMOBACTER THERMAUTOTROPHICUS;

EID: 70349485716     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.0904439106     Document Type: Article

References (32)

1. Curie C, Briat JF (2003) Iron transport and signaling in plants. Annu Rev Plant Biol 54:183-206.
2. Hell R, Stephan UW (2003) Iron uptake, trafficking, and homeostasis in plants. Planta 216:541-551. (Pubitemid 36761735)
3. Mori S (1999) Iron acquisition by plants. Curr Opin Plant Biol 2:250-253.
4. Colangelo EP, Guerinot ML (2006) Put the metal to the petal: Metal uptake and transport throughout plants. Curr Opin Plant Biol 9:322-330.
5. Curie C, et al. (2009) Metal movement within the plant: Contribution of nicotianamine and yellow stripe 1-like transporters. Ann Bot (Lond) 103:1-11.
6. Haydon MJ, Cobbett CS (2007) Transporters of ligands for essential metal ions in plants. New Phytol 174:499-506.
7. Ling HQ, Koch G, Baumlein H, Ganal MW (1999) Map-based cloning of chloronerva, a gene involved in iron uptake of higher plants encoding nicotianamine synthase. Proc Natl Acad Sci USA 96:7098-7103. (Pubitemid 29275016)
8. Ling HQ, Pich A, Scholz G, Ganal MW (1996) Genetic analysis of two tomato mutants affected in the regulation of iron metabolism. Mol Gen Genet 252:87-92. (Pubitemid 126451130)
9. Cheng L, et al. (2007) Mutation in nicotianamine aminotransferase stimulated the Fe(II) acquisition system and led to iron accumulation in rice. Plant Physiol 145:1647-1657. (Pubitemid 350276783)
10. Takahashi M, et al. (2003) Role of nicotianamine in the intracellular delivery of metals and plant reproductive development. Plant Cell 15:1263-1280. (Pubitemid 36715171)
11. von Wiren N, et al. (1999) Nicotianamine chelates both FeIII and FeII. Implications for metal transport in plants. Plant Physiol 119:1107-1114.
12. Vacchina V, et al. (2003) Speciation of nickel in a hyperaccumulating plant by high-performance liquid chromatography-inductively coupled plasma mass spectrometry and electrospray MS/MS assisted by cloning using yeast complementation. Anal Chem 75:2740-2745. (Pubitemid 36667121)
13. Pianelli K, Mari S, Marques L, Lebrun M, Czernic P (2005) Nicotianamine overaccumulation confers resistance to nickel in Arabidopsis thaliana. Transgenic Res 14:739-748. (Pubitemid 41504325)
14. Kim S, et al. (2005) Increased nicotianamine biosynthesis confers enhanced tolerance of high levels of metals, in particular nickel, to plants. Plant Cell Physiol 46:1809-1818. (Pubitemid 41746563)
15. Koike S, et al. (2004) OsYSL2 is a rice metal-nicotianamine transporter that is regulated by iron and expressed in the phloem. Plant J 39:415-424. (Pubitemid 39040146)
16. Weber M, Harada E, Vess C, Roepenack-Lahaye E, Clemens S (2004) Comparative microarray analysis of Arabidopsis thaliana and Arabidopsis halleri roots identifies nicotianamine synthase, a ZIP transporter and other genes as potential metal hyperaccumulation factors. Plant J 37:269-281. (Pubitemid 38106611)
17. Mari S, et al. (2006) Root-to-shoot long-distance circulation of nicotianamine and nicotianamine-nickel chelates in the metal hyperaccumulator Thlaspi caerulescens. J Exp Bot 57:4111-4122. (Pubitemid 44950411)
18. Kinoshita E, Yamakoshi J, Kikuchi M (1993) Purification and identification of an angiotensin I-converting enzyme inhibitor from soy sauce. Biosci Biotechnol Biochem 57:1107-1110.
19. Shimizu E, Hayashi A, Takahashi R, Aoyagi Y, Murakami T, Kimoto K (1999) Effects of angiotensin I-converting enzyme inhibitor from Ashitaba (Angelica keiskei) on blood pressure of spontaneously hypertensive rats. J Nutr Sci Vitaminol (Tokyo) 45:375-383. (Pubitemid 29330348)
20. Higuchi K, Suzuki K, Nakanishi H, Yamaguchi H, Nishizawa NK, Mori S (1999) Cloning of nicotianamine synthase genes, novel genes involved in the biosynthesis of phytosiderophores. Plant Physiol 119:471-480. (Pubitemid 29384536)
21. Herbik A, et al. (1999) Isolation, characterization, and cDNA cloning of nicotianamine synthase from barley. A key enzyme for iron homeostasis in plants. Eur J Biochem 265:231-239. (Pubitemid 29466031)
22. Wu H, et al. (2008) Crystal structure of human spermine synthase: Implications of substrate binding and catalytic mechanism. J Biol Chem 283:16135-16146.
23. Wu H, et al. (2007) Structure and mechanism of spermidine synthases. Biochemistry 46:8331-8339.
24. Trampczynska A, Bottcher C, Clemens S (2006) The transition metal chelator nicotianamine is synthesized by filamentous fungi. FEBS Lett 580:3173-3178. (Pubitemid 43729660)
25. Dreyfus C, Pignol D, Arnoux P (2008) Expression, purification, crystallization and preliminary X-ray analysis of an archaeal protein homologous to plant nicotianamine synthase. Acta Crystallogr F 64:933-935.
26. Mallick P, Boutz DR, Eisenberg D, Yeates TO (2002) Genomic evidence that the intracellular proteins of archaeal microbes contain disulfide bonds. Proc Natl Acad Sci USA 99:9679-9684. (Pubitemid 34831107)
27. Holm L, Sander C (1993) Protein structure comparison by alignment of distance matrices. J Mol Biol 233:123-138. (Pubitemid 23288916)
28. Kozbial PZ, Mushegian AR (2005) Natural history of S-adenosylmethionine- binding proteins. BMC Struct Biol 5:19.
29. Martin JL, McMillan FM (2002) SAM (dependent) I AM: The S-adenosylmethionine-dependent methyltransferase fold. Curr Opin Struct Biol 12:783-793.
30. Schluckebier G, O'Gara M, Saenger W, Cheng X (1995) Universal catalytic domain structure of AdoMet-dependent methyltransferases. J Mol Biol 247:16-20.
31. Korolev S, et al. (2002) The crystal structure of spermidine synthase with a multisubstrate adduct inhibitor. Nat Struct Biol 9:27-31. (Pubitemid 34049175)
32. Ball P (2008) Water as an active constituent in cell biology. Chem Rev 108:74-108.