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Volumn 392, Issue 5, 2009, Pages 1278-1291

Positively Cooperative Binding of Zinc Ions to Bacillus cereus 569/H/9 β-Lactamase II Suggests that the Binuclear Enzyme Is the Only Relevant Form for Catalysis

Author keywords

circular dichroism; cooperativity; mass spectrometry; metallo lactamases; NMR

Indexed keywords

APOENZYME; CADMIUM; CEPHALOSPORINASE; CHELATING AGENT; FURAPTRA; ZINC ION;

EID: 70249131429     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jmb.2009.07.092     Document Type: Article
Times cited : (30)

References (49)
  • 1
    • 0001817705 scopus 로고
    • β-Lactamase: mechanism of action
    • Page M.I. (Ed), Blackie A. & P., London, UK
    • Waley S.G. β-Lactamase: mechanism of action. In: Page M.I. (Ed). The Chemistry of β-Lactams (1992), Blackie A. & P., London, UK 198-228
    • (1992) The Chemistry of β-Lactams , pp. 198-228
    • Waley, S.G.1
  • 2
    • 0029019031 scopus 로고
    • β-Lactamases and bacterial resistance to antibiotics
    • Frère J.M. β-Lactamases and bacterial resistance to antibiotics. Mol. Microbiol. 16 (1995) 385-395
    • (1995) Mol. Microbiol. , vol.16 , pp. 385-395
    • Frère, J.M.1
  • 3
    • 0033082703 scopus 로고    scopus 로고
    • The β-lactamase cycle: a tale of selective pressure and bacterial ingenuity
    • Matagne A., Dubus A., Galleni M., and Frère J.M. The β-lactamase cycle: a tale of selective pressure and bacterial ingenuity. Nat. Prod. Rep. 16 (1999) 1-19
    • (1999) Nat. Prod. Rep. , vol.16 , pp. 1-19
    • Matagne, A.1    Dubus, A.2    Galleni, M.3    Frère, J.M.4
  • 4
    • 0013865825 scopus 로고
    • Zinc as a cofactor for cephalosporinase from Bacillus cereus 569
    • Sabath L.D., and Abraham E.P. Zinc as a cofactor for cephalosporinase from Bacillus cereus 569. Biochem. J. 98 (1966) 11C-13C
    • (1966) Biochem. J. , vol.98
    • Sabath, L.D.1    Abraham, E.P.2
  • 6
    • 0027284501 scopus 로고
    • Metallo-β-lactamases: a new therapeutic challenge
    • Payne D.J. Metallo-β-lactamases: a new therapeutic challenge. J. Med. Microbiol. 39 (1993) 93-99
    • (1993) J. Med. Microbiol. , vol.39 , pp. 93-99
    • Payne, D.J.1
  • 10
    • 34948859355 scopus 로고    scopus 로고
    • Metallo-beta-lactamases (classification, activity, genetic organization, structure, zinc coordination) and their superfamily
    • Bebrone C. Metallo-beta-lactamases (classification, activity, genetic organization, structure, zinc coordination) and their superfamily. Biochem. Pharmacol. 74 (2007) 1686-1701
    • (2007) Biochem. Pharmacol. , vol.74 , pp. 1686-1701
    • Bebrone, C.1
  • 14
    • 45349100770 scopus 로고    scopus 로고
    • The mechanisms of catalysis by metallo β-lactamases
    • Article ID 576297
    • Page M.I., and Badarau A. The mechanisms of catalysis by metallo β-lactamases. Bioinorg. Chem. Appl. 2008 (2008) Article ID 576297
    • (2008) Bioinorg. Chem. Appl. , vol.2008
    • Page, M.I.1    Badarau, A.2
  • 16
    • 0033520073 scopus 로고    scopus 로고
    • On the mechanism of the metallo-β-lactamase from Bacteroides fragilis
    • Wang Z., Fast W., and Benkovic S.J. On the mechanism of the metallo-β-lactamase from Bacteroides fragilis. Biochemistry 38 (1999) 10013-10023
    • (1999) Biochemistry , vol.38 , pp. 10013-10023
    • Wang, Z.1    Fast, W.2    Benkovic, S.J.3
  • 17
    • 0037399075 scopus 로고    scopus 로고
    • Analysis of the importance of the metallo-β-lactamase active site loop in substrate binding and catalysis
    • Moali C., Anne C., Lamotte-Brasseur J., Groslambert S., Devreese B., Van Beeumen J., et al. Analysis of the importance of the metallo-β-lactamase active site loop in substrate binding and catalysis. Chem. Biol. 10 (2003) 319-329
    • (2003) Chem. Biol. , vol.10 , pp. 319-329
    • Moali, C.1    Anne, C.2    Lamotte-Brasseur, J.3    Groslambert, S.4    Devreese, B.5    Van Beeumen, J.6
  • 18
    • 33750624074 scopus 로고    scopus 로고
    • Metallo-β-lactamases: novel weaponry for antibiotic resistance in bacteria
    • Crowder M.W., Spencer J., and Vila A.J. Metallo-β-lactamases: novel weaponry for antibiotic resistance in bacteria. Acc. Chem. Res. 39 (2006) 721-728
    • (2006) Acc. Chem. Res. , vol.39 , pp. 721-728
    • Crowder, M.W.1    Spencer, J.2    Vila, A.J.3
  • 19
    • 33644948482 scopus 로고    scopus 로고
    • Crystal structure of Pseudomonas aeruginosa SPM-1 provides insights into variable zinc affinity of metallo-β-lactamases
    • Murphy T.A., Catto L.E., Halford S.E., Hadfield A.T., Minor W., Walsh T.R., and Spencer J. Crystal structure of Pseudomonas aeruginosa SPM-1 provides insights into variable zinc affinity of metallo-β-lactamases. J. Mol. Biol. 357 (2006) 890-903
    • (2006) J. Mol. Biol. , vol.357 , pp. 890-903
    • Murphy, T.A.1    Catto, L.E.2    Halford, S.E.3    Hadfield, A.T.4    Minor, W.5    Walsh, T.R.6    Spencer, J.7
  • 20
    • 0030586055 scopus 로고    scopus 로고
    • Crystal structure of the wide-spectrum binuclear zinc β-lactamase from Bacteroides fragilis
    • Concha N.O., Rasmussen B.A., Bush K., and Herzberg O. Crystal structure of the wide-spectrum binuclear zinc β-lactamase from Bacteroides fragilis. Structure 4 (1996) 823-836
    • (1996) Structure , vol.4 , pp. 823-836
    • Concha, N.O.1    Rasmussen, B.A.2    Bush, K.3    Herzberg, O.4
  • 21
    • 0034681922 scopus 로고    scopus 로고
    • Crystal structure of the IMP-1 metallo β-lactamase from Pseudomonas aeruginosa and its complex with a mercaptocarboxylate inhibitor: binding determinants of a potent, broad-spectrum inhibitor
    • Concha N.O., Janson C.A., Rowling P., Pearson S., Cheever C.A., Clarke B.P., et al. Crystal structure of the IMP-1 metallo β-lactamase from Pseudomonas aeruginosa and its complex with a mercaptocarboxylate inhibitor: binding determinants of a potent, broad-spectrum inhibitor. Biochemistry 39 (2000) 4288-4298
    • (2000) Biochemistry , vol.39 , pp. 4288-4298
    • Concha, N.O.1    Janson, C.A.2    Rowling, P.3    Pearson, S.4    Cheever, C.A.5    Clarke, B.P.6
  • 22
    • 0037592222 scopus 로고    scopus 로고
    • The 1.5-Å structure of Chryseobacterium meningosepticum zinc β-lactamase in complex with the inhibitor, d-captopril
    • García-Sáez I., Hopkins J., Papamicael C., Franceschini N., Amicosante G., Rossolini G.M., et al. The 1.5-Å structure of Chryseobacterium meningosepticum zinc β-lactamase in complex with the inhibitor, d-captopril. J. Biol. Chem. 278 (2003) 23868-23873
    • (2003) J. Biol. Chem. , vol.278 , pp. 23868-23873
    • García-Sáez, I.1    Hopkins, J.2    Papamicael, C.3    Franceschini, N.4    Amicosante, G.5    Rossolini, G.M.6
  • 23
    • 0028810769 scopus 로고
    • The 3-D structure of a zinc metallo-β-lactamase from Bacillus cereus reveals a new type of protein fold
    • Carfi A., Pares S., Duée E., Galleni M., Duez C., Frère J.M., and Dideberg O. The 3-D structure of a zinc metallo-β-lactamase from Bacillus cereus reveals a new type of protein fold. EMBO J. 14 (1995) 4914-4921
    • (1995) EMBO J. , vol.14 , pp. 4914-4921
    • Carfi, A.1    Pares, S.2    Duée, E.3    Galleni, M.4    Duez, C.5    Frère, J.M.6    Dideberg, O.7
  • 25
    • 0032497362 scopus 로고    scopus 로고
    • Crystal structure of the zinc-dependant β-lactamase from Bacillus cereus at 1.9 Å resolution: binuclear active site with features of a mononuclear enzyme
    • Fabiane S.M., Sohi M.K., Wan T., Payne D.J., Bateson J.H., Mitchell T., and Sutton B.J. Crystal structure of the zinc-dependant β-lactamase from Bacillus cereus at 1.9 Å resolution: binuclear active site with features of a mononuclear enzyme. Biochemistry 37 (1998) 12404-12411
    • (1998) Biochemistry , vol.37 , pp. 12404-12411
    • Fabiane, S.M.1    Sohi, M.K.2    Wan, T.3    Payne, D.J.4    Bateson, J.H.5    Mitchell, T.6    Sutton, B.J.7
  • 26
    • 37349007671 scopus 로고    scopus 로고
    • The three-dimensional structure of VIM-2, a Zn-β-lactamase from Pseudomonas aeruginosa in its reduced and oxidised form
    • Garcia-Saez I., Docquier J.D., Rossolini G.M., and Dideberg O. The three-dimensional structure of VIM-2, a Zn-β-lactamase from Pseudomonas aeruginosa in its reduced and oxidised form. J. Mol. Biol. 375 (2008) 604-611
    • (2008) J. Mol. Biol. , vol.375 , pp. 604-611
    • Garcia-Saez, I.1    Docquier, J.D.2    Rossolini, G.M.3    Dideberg, O.4
  • 28
    • 0037065696 scopus 로고    scopus 로고
    • Exploring the role and the binding affinity of a second zinc equivalent in B. cereus metallo-β-lactamase
    • Rasia R.M., and Vila A.J. Exploring the role and the binding affinity of a second zinc equivalent in B. cereus metallo-β-lactamase. Biochemistry 41 (2002) 1853-1860
    • (2002) Biochemistry , vol.41 , pp. 1853-1860
    • Rasia, R.M.1    Vila, A.J.2
  • 29
    • 0037025301 scopus 로고    scopus 로고
    • Substrate-activated zinc binding of metallo-β-lactamases: physiological importance of mononuclear enzymes
    • Wommer S., Rival S., Heinz U., Galleni M., Frère J.M., Franceschini N., et al. Substrate-activated zinc binding of metallo-β-lactamases: physiological importance of mononuclear enzymes. J. Biol. Chem. 277 (2002) 24142-24147
    • (2002) J. Biol. Chem. , vol.277 , pp. 24142-24147
    • Wommer, S.1    Rival, S.2    Heinz, U.3    Galleni, M.4    Frère, J.M.5    Franceschini, N.6
  • 30
    • 11244317355 scopus 로고    scopus 로고
    • Metallo-beta-lactamases: two binding sites for one catalytic metal ion?
    • Heinz U., and Adolph H.W. Metallo-beta-lactamases: two binding sites for one catalytic metal ion?. Cell. Mol. Life Sci. 61 (2004) 2827-2839
    • (2004) Cell. Mol. Life Sci. , vol.61 , pp. 2827-2839
    • Heinz, U.1    Adolph, H.W.2
  • 32
    • 0032516439 scopus 로고    scopus 로고
    • Spectroscopic characterization of a binuclear metal site in Bacillus cereus β-lactamase II
    • Orellano E.G., Girardini J.E., Cricco J.A., Ceccarelli E.A., and Vila A.J. Spectroscopic characterization of a binuclear metal site in Bacillus cereus β-lactamase II. Biochemistry 37 (1998) 10173-10180
    • (1998) Biochemistry , vol.37 , pp. 10173-10180
    • Orellano, E.G.1    Girardini, J.E.2    Cricco, J.A.3    Ceccarelli, E.A.4    Vila, A.J.5
  • 33
    • 0035976958 scopus 로고    scopus 로고
    • Metal ion binding and coordination geometry for wild type and mutants of metallo-β-lactamase from Bacillus cereus 569/H/9 (BcII)
    • de Seny D., Heinz U., Wommer S., Kiefer M., Meyer-Klaucke W., Galleni M., et al. Metal ion binding and coordination geometry for wild type and mutants of metallo-β-lactamase from Bacillus cereus 569/H/9 (BcII). J. Biol. Chem. 276 (2001) 45065-45078
    • (2001) J. Biol. Chem. , vol.276 , pp. 45065-45078
    • de Seny, D.1    Heinz, U.2    Wommer, S.3    Kiefer, M.4    Meyer-Klaucke, W.5    Galleni, M.6
  • 34
    • 0016636637 scopus 로고
    • Comparison of β-lactamase II from Bacillus cereus 569/H/9 with a β-lactamase from Bacillus cereus 5/B/6
    • Davies R.B., Abraham E.P., Fleming J., and Pollock M.R. Comparison of β-lactamase II from Bacillus cereus 569/H/9 with a β-lactamase from Bacillus cereus 5/B/6. Biochem. J. 145 (1975) 409-411
    • (1975) Biochem. J. , vol.145 , pp. 409-411
    • Davies, R.B.1    Abraham, E.P.2    Fleming, J.3    Pollock, M.R.4
  • 35
    • 33748253736 scopus 로고    scopus 로고
    • The variation of catalytic efficiency of Bacillus cereus metallo-beta-lactamase with different active site metal ions
    • Badarau A., and Page M.I. The variation of catalytic efficiency of Bacillus cereus metallo-beta-lactamase with different active site metal ions. Biochemistry 45 (2006) 10654-10666
    • (2006) Biochemistry , vol.45 , pp. 10654-10666
    • Badarau, A.1    Page, M.I.2
  • 36
    • 0023679530 scopus 로고
    • Riordan J.F., and Vallee B.L. (Eds), Academic Press, San Diego, CA
    • In: Riordan J.F., and Vallee B.L. (Eds). Methods in Enzymology: Metallobiochemistry Part A vol. 158 (1988), Academic Press, San Diego, CA 3-21
    • (1988) Methods in Enzymology: Metallobiochemistry Part A , vol.158 , pp. 3-21
  • 37
    • 48149087258 scopus 로고    scopus 로고
    • Loss of enzyme activity during turnover of the Bacillus cereus β-lactamase catalysed hydrolysis of β-lactams due to loss of zinc ion
    • Badarau A., and Page M.I. Loss of enzyme activity during turnover of the Bacillus cereus β-lactamase catalysed hydrolysis of β-lactams due to loss of zinc ion. J. Biol. Inorg. Chem. 13 (2008) 919-928
    • (2008) J. Biol. Inorg. Chem. , vol.13 , pp. 919-928
    • Badarau, A.1    Page, M.I.2
  • 38
    • 67650242421 scopus 로고    scopus 로고
    • Zinc ion-induced domain organization in metallo-β-lactamases: a flexible "zinc arm" for rapid metal ion transfer?
    • Selevsek N., Rival S., Tholey A., Heinzle E., Heinz U., Hemmingsen L., and Adolph H.W. Zinc ion-induced domain organization in metallo-β-lactamases: a flexible "zinc arm" for rapid metal ion transfer?. J. Biol. Chem. 284 (2009) 16419-16431
    • (2009) J. Biol. Chem. , vol.284 , pp. 16419-16431
    • Selevsek, N.1    Rival, S.2    Tholey, A.3    Heinzle, E.4    Heinz, U.5    Hemmingsen, L.6    Adolph, H.W.7
  • 40
    • 0035944474 scopus 로고    scopus 로고
    • Dynamics of mononuclear cadmium β-lactamase revealed by the combination of NMR and PAC spectroscopy
    • Hemmingsen L., Damblon C., Antony J., Jensen M., Adolph H.W., Wommer S., et al. Dynamics of mononuclear cadmium β-lactamase revealed by the combination of NMR and PAC spectroscopy. J. Am. Chem. Soc. 123 (2001) 10329-10335
    • (2001) J. Am. Chem. Soc. , vol.123 , pp. 10329-10335
    • Hemmingsen, L.1    Damblon, C.2    Antony, J.3    Jensen, M.4    Adolph, H.W.5    Wommer, S.6
  • 41
  • 42
    • 0035852802 scopus 로고    scopus 로고
    • Familial mutations and zinc stoichiometry determine the rate-limiting step of nitrocefin hydrolysis by metallo-beta-lactamase from Bacteroides fragilis
    • Fast W., Wang Z., and Benkovic S.J. Familial mutations and zinc stoichiometry determine the rate-limiting step of nitrocefin hydrolysis by metallo-beta-lactamase from Bacteroides fragilis. Biochemistry 40 (2001) 1640-1650
    • (2001) Biochemistry , vol.40 , pp. 1640-1650
    • Fast, W.1    Wang, Z.2    Benkovic, S.J.3
  • 43
    • 0042707576 scopus 로고    scopus 로고
    • The inhibitor thiomandelic acid binds to both metal ions in metallo-beta-lactamase and induces positive cooperativity in metal binding
    • Damblon C., Jensen M., Ababou A., Barsukov I., Papamicael C., Schofield C.J., et al. The inhibitor thiomandelic acid binds to both metal ions in metallo-beta-lactamase and induces positive cooperativity in metal binding. J. Biol. Chem. 278 (2003) 29240-29251
    • (2003) J. Biol. Chem. , vol.278 , pp. 29240-29251
    • Damblon, C.1    Jensen, M.2    Ababou, A.3    Barsukov, I.4    Papamicael, C.5    Schofield, C.J.6
  • 44
    • 0022179676 scopus 로고
    • Sodium, potassium, calcium, magnesium, zinc, citrate and chloride content of human prostatic and seminal fluid
    • Kavanagh J.P. Sodium, potassium, calcium, magnesium, zinc, citrate and chloride content of human prostatic and seminal fluid. J. Reprod. Fertil. 75 (1985) 35-41
    • (1985) J. Reprod. Fertil. , vol.75 , pp. 35-41
    • Kavanagh, J.P.1
  • 45
    • 42749096177 scopus 로고    scopus 로고
    • Development of an anodic stripping voltammetric assay, using a disposable mercury-free screen-printed carbon electrode, for the determination of zinc in human sweat
    • Crew A., Cowell D.C., and Hart J.P. Development of an anodic stripping voltammetric assay, using a disposable mercury-free screen-printed carbon electrode, for the determination of zinc in human sweat. Talanta 75 (2008) 1221-1226
    • (2008) Talanta , vol.75 , pp. 1221-1226
    • Crew, A.1    Cowell, D.C.2    Hart, J.P.3
  • 47
    • 3242877618 scopus 로고    scopus 로고
    • DICHROWEB, an online server for protein secondary structure analyses from circular dichroism spectroscopic data
    • Whitmore L., and Wallace B.A. DICHROWEB, an online server for protein secondary structure analyses from circular dichroism spectroscopic data. Nucleic Acids Res. 32 (2004) W668-W673
    • (2004) Nucleic Acids Res. , vol.32
    • Whitmore, L.1    Wallace, B.A.2
  • 48
    • 45849096536 scopus 로고    scopus 로고
    • Protein secondary structure analyses from circular dichroism spectroscopy: methods and reference databases
    • Whitmore L., and Wallace B.A. Protein secondary structure analyses from circular dichroism spectroscopy: methods and reference databases. Biopolymers 89 (2008) 392-400
    • (2008) Biopolymers , vol.89 , pp. 392-400
    • Whitmore, L.1    Wallace, B.A.2
  • 49
    • 0026951903 scopus 로고
    • Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions
    • Piotto M., Saudek V., and Sklenár V. Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions. J. Biomol. NMR 2 (1992) 661-665
    • (1992) J. Biomol. NMR , vol.2 , pp. 661-665
    • Piotto, M.1    Saudek, V.2    Sklenár, V.3


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