On the mechanism of the metallo-β-lactamase from Bacteroides fragilis

Biochemistry

Volumn 38, Issue 31, 1999, Pages 10013-10023

  Wang, Zhigang ^a   Fast, Walter ^a   Benkovic, Stephen J ^a  

^a PENNSYLVANIA STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACETIC ACID; AMINE; ANION; ASPARTIC ACID; AZIDE; BETA LACTAM; BETA LACTAMASE; FLUORIDE; FLUOROACETIC ACID; HYDROLASE; HYDROXIDE; METALLOPROTEIN; NITROCEFIN; NITROGEN; THIOCYANATE;

ARTICLE; BACTEROIDES FRAGILIS; CHEMICAL REACTION; CHEMICAL STRUCTURE; CONTROLLED STUDY; ELECTRICITY; ENZYME KINETICS; ENZYME MECHANISM; ENZYME STRUCTURE; HYDROLYSIS; NONHUMAN; PH; PRIORITY JOURNAL; PROTON TRANSPORT;

ANIONS; BACTEROIDES FRAGILIS; BETA-LACTAMASES; CATALYSIS; CEPHALOSPORINS; HYDROLYSIS; HYDROXYLAMINE; HYDROXYLAMINES; INDICATORS AND REAGENTS; KINETICS; MODELS, CHEMICAL; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; SUBSTRATE SPECIFICITY;

BACTERIA (MICROORGANISMS); BACTEROIDES FRAGILIS; NEGIBACTERIA;

EID: 0033520073     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi990356r     Document Type: Article

References (59)

1. Philippon, A., Dusart, J., Joris, B., and Frère, J.-M. (1998) Cell. Mol. Life Sci. 54, 341-346.
2. Neu, H. C. (1992) Science 257, 1064-1073.
3. Davies, J. (1994) Science 264, 375-382.
4. Ambler, R. P. (1980) Philos. Trans. R. Soc. London B289, 321-331.
5. Bush, K., Jacoby, G. A., and Medeiros, A. A. (1995) Antimicrob. Agents Chemother. 39, 1211-1233.
6. Payne, D. J. (1993) J. Med. Microbiol. 39, 93-99.
7. Rasmussen, B. A., and Bush, K. (1997) Antimicrob. Agents Chemother. 41, 223-232.
8. Rossolini, G. M., Walsh, T. R., and Amicosante, G. (1996) Microb. Drug Resist. (Larchmont, N.Y.) 2, 245-252.
9. Bandoh, K., Watanabe, K., Muto, Y., Tanka, Y., Kato, N., and Uneo, K. (1992) J. Antibiot. (Tokyo) 45, 542-547.
10. Rossolini, G. M., Franceschin, N., Riccio, M. L., Mercuri, P. S., Perilli, M., Galleni, M., Frère, J.-M., and Amicosante, G. (1998) Biochem. J. 332, 145-152.
11. Senda, K., Arakawa, Y., Ichiyama, S., Nakashima, K., Ito, H., Ohsuka, S., Shimokata, K., Kato, N., and Ohta, M. (1996) J. Clin. Microbiol. 34, 2909-2913.
12. Watanbe, M., Iyobe, S., Inoue, M., and Mitshuashi, S. (1991) Antimicrob. Agents Chemother. 35, 147-151.
13. Ito, H., Arakawa, Y., Ohsuka, S., Wacharotayankun, R., Kato, N., and Ohta, M. (1995) Antimicrob. Agents Chemother. 29, 824-829.
14. Massova, I., and Mobashery, S. (1998) Antimicrob. Agents Chemother. 42, 1-17.
15. Osano, E., Arkawa, Y., Wacharotayankun, R., Ohta, M., Horii, T., Ito, H., Yoshimura, F., and Kato, N. (1994) Antimicrob. Agents Chemother. 38, 71-78.
16. Yang, Y., Rasmussen, B. A., and Bush, K. (1992) Antimicrob. Agents Chemother. 36, 1155-1157.
17. Felici, A., Amicosante, G., Oratore, A., Strom, R., Ledent, P., Joris, B., and Frère, J.-M. (1993) Biochem. J. 291, 151-155.
18. Felici, A., and Amicosante, G. (1995) Antimicrob. Agents Chemother. 39, 192-199.
19. Walsh, T. R., Gamblin, S., Emery, D. C., MacGowan, A. P., and Bennett, P. M. (1996) J. Antimicrob. Chemother. 37, 423-431.
20. Fujii, T., Sato, K., Miyata, K., Inoue, M., and Mitsuhashi, S. (1986) Antimicrob. Agents Chemother. 29, 925-926.
21. Crowder, M. W., Wang, Z., Frankilin, S. L., Zovinka, E. P., and Benkovic, S. J. (1996) Biochemistry 35, 12126-12132.
22. Wang, Z., and Benkovic, S. J. (1998) J. Biol. Chem. 273, 22402-22408.
23. Crowder, M. W., Walsh, T. R., Banovic, L., Pettit, M., and Spencer, J. (1998) Antimicrob. Agents Chemother. 42, 921-926.
24. Orellano, E. G., Girardini, J. E., Cricco, J. A., Ceccarelli, E. A., and Vila, A. J. (1998) Biochemistry 37, 10173-10180.
25. Valladares, M. H., Felici, A., Weber, G., Adolph, H. W., Zeppezauer, M., Rossolini, G. M., Amicosante, G., Frère, J.-M., and Galleni, M. (1997) Biochemistry 36, 11534-11541.
26. Carfi, A., Pares, S., Duee, E., Galleni, M., Duez, C., Frère, J.-M., and Dideberg, O. (1995) EMBO J. 14, 4914-4921.
27. Carfi, A., Duee, E., Galleni, M., Frère, J.-M., and Dideberg, O. (1998) Acta Crystallogr. D54, 313-323.
28. Fabiane, S. M., Sohi, M. K., Wan, T., Payne, D. J., Bateson, J. H., Mitchell, T., and Sutton, B. J. (1998) Biochemistry 37, 12404-12411.
29. Concha, N. O., Rasmussen, B. A., Bush, K., and Herzberg, O. (1996) Structure 4, 823-836.
30. Carfi, A., Soto, R.-P., Duee, E., Galleni, M., Frère, J.-M., and Dideberg, O. (1998) Acta Crystallogr. D54, 47-57.
31. Ullah, J. H., Walsh, T. R., Taylor, I. A., Emery, D. C., Verma, C. S., Gamblin, S. J., and Spencer, J. (1998) J. Mol. Biol. 284, 125-126.
32. Bicknell, R., and Waley, S. G. (1985) Biochemistry 24, 6876-6887.
33. Bicknell, R., Schäffer, A., Waley, S. G., and Auld, D. S. (1986) Biochemistry 25, 7208-7215.
34. Bounaga, S., Laws, A. P., Galleni, M., and Page, M. I. (1998) Biochem. J. 331, 703-771.
35. Page, M. I., and Laws, A. P. (1998) Chem. Commun., 1609-1616.
36. Nord, C.-E., Olsson, B., and Dornbusch, K. (1978) Scand. J. Infect. Dis. Suppl. 13, 27-32.
37. Brook, I. (1989) Ann. Clin. Lab. Sci. 19, 360-376.
38. Rasmussen, B. A., Bush, K., and Tally, F. P. (1993) Clin. Infect. Dis. 16, 390-400.
39. Wang, Z., Fast, W., and Benkovic, S. J. (1998) J. Am. Chem. Soc. 120, 10788-10789.
40. Beechem, J. M. (1992) Methods Enzymol. 210, 37-53.
41. Barshop, B. A., Wrenn, R. F., and Frieden, C. (1983) Anal. Biochem. 130, 134-145.
42. Dang, Q., and Frieden, C. (1997) Trends Biochem. Sci. 22, 317.
43. O'Callaghan, C. H., Morris, A., Kirby, S. M., and Shingler, A. H. (1972) Antimicrob. Agents Chemother. 1, 283-288.
44. Cleland, W. W. (1977) Adv. Enzymol. Relat. Areas Mol. Biol. 45, 273-387.
45. McManus-Munoz, S., and Crowder, M. W. (1999) Biochemistry 38, 1547-1553.
46. Charney, E., and Bernhard, S. A. (1967) J. Am. Chem. Soc. 89, 2726-2733.
47. Barzaghi, M., Gamba, A., Morosi, G., and Simonetta, M. (1974) J. Phys. Chem. 78, 49-56.
48. Cotton, F. A., and Wilkinson, G. (1988) Advanced Inorganic Chemistry, 5th ed., pp 1285-1306, John Wiley & Sons, New York.
49. Chen, G., Edwards, T., D'souza, V. M., and Holz, R. C. (1997) Biochemistry 36, 4278-4286.
50. Gensmantel, N. P., Proctor, P., and Page, M. I. (1980) J. Chem. Soc., Perkins Trans. 2, 1725-1732.
51. Gensamantel, N. P., Gowling, E. W., and Page, M. I. (1978) J. Chem. Soc., Perkins Trans. 2, 335-342.
52. Toney, J. H., Fitzgerald, P. M. D., Grover-Sharma, N., Olson, S. H., May, W. J., Sundelof, J. G., Vanderwall, D. E., Cleary, K. A., Grant, S. K., Wu, J. K., Kozarich, J. W., Pompliano, D. L., and Hammond, G. G. (1998) Chem. Biol. 5, 185-196.
53. Burton, G., Fell, S. C. M., and Bateson, J. H. (1991) U.S. Patent 5,064,649.
54. Brown, R. S., Bennet, A. J., and Slebocka-Tilk, H. (1992) Acc. Chem. Res. 25, 481-488.
55. Laws, A. P., and Page, M. I. (1989) J. Chem. Soc., Perkin Trans. 2, 1577-1581.
56. Page, M. I. (1984) Acc. Chem. Res. 17, 144-151.
57. Sträter, N., Lipscomb, W. N., Klabunde, T., and Krebs, B. (1996) Angew. Chem., Int. Ed. 35, 2024-2055.
58. Wilcox, D. E. (1996) Chem. Rev. 96, 2435-2458.
59. Ludewig, M., Lasch, J., Kettmann, U., Frohne, M., and Hanson, H. (1971) Enzymologia 41, 60-67.