-
1
-
-
67649552968
-
Super DksAs: Substitutions in DksA enhancing its effects on transcription initiation
-
Blankschien, M. D., J.-H. Lee, E. A. Grace, C. W. Lennon, J. A. Halliday, W. Ross, R. L. Gourse, and C. Herman. 2009. Super DksAs: substitutions in DksA enhancing its effects on transcription initiation. EMBO J. 28:1720-1731.
-
(2009)
EMBO J
, vol.28
, pp. 1720-1731
-
-
Blankschien, M.D.1
Lee, J.-H.2
Grace, E.A.3
Lennon, C.W.4
Halliday, J.A.5
Ross, W.6
Gourse, R.L.7
Herman, C.8
-
2
-
-
0016748261
-
Procedure for the rapid, large-scale purification of Escherichia coli DNA-dependent RNA polymerase involving polymin P precipitation and DNA-cellulose chromatography
-
Burgess, R. R., and J. J. Jendrisak. 1975. Procedure for the rapid, large-scale purification of Escherichia coli DNA-dependent RNA polymerase involving polymin P precipitation and DNA-cellulose chromatography. Biochemistry 14:4634-4638.
-
(1975)
Biochemistry
, vol.14
, pp. 4634-4638
-
-
Burgess, R.R.1
Jendrisak, J.J.2
-
3
-
-
37749024824
-
PpGpp and DksA likely regulate the activity of the extracytoplasmic stress factor sigma e in Escherichia coli by both direct and indirect mechanisms
-
Costanzo, A., H. Nicoloff, S. E. Barchinger, A. B. Banta, R. L. Gourse, and S. E. Ades. 2008. ppGpp and DksA likely regulate the activity of the extracytoplasmic stress factor sigma E in Escherichia coli by both direct and indirect mechanisms. Mol. Microbiol. 67:619-632.
-
(2008)
Mol. Microbiol.
, vol.67
, pp. 619-632
-
-
Costanzo, A.1
Nicoloff, H.2
Barchinger, S.E.3
Banta, A.B.4
Gourse, R.L.5
Ades, S.E.6
-
5
-
-
45449099933
-
Advances in bacterial promoter recognition and its control by factors that do not bind DNA
-
Haugen, S. P., W. Ross, and R. L. Gourse. 2008. Advances in bacterial promoter recognition and its control by factors that do not bind DNA. Nat. Rev. Microbiol. 6:507-519.
-
(2008)
Nat. Rev. Microbiol.
, vol.6
, pp. 507-519
-
-
Haugen, S.P.1
Ross, W.2
Gourse, R.L.3
-
6
-
-
0346243938
-
Transcript cleavage factors GreA and GreB act as transient catalytic components of RNA polymerase
-
DOI 10.1093/emboj/cdg610
-
Laptenko, O., J. Lee, I. Lomakin, and S. Borukhov. 2003. Transcript cleavage factors GreA and GreB act as transient catalytic components of RNA polymerase. EMBO J. 22:6322-6334. (Pubitemid 37522589)
-
(2003)
EMBO Journal
, vol.22
, Issue.23
, pp. 6322-6334
-
-
Laptenko, O.1
Lee, J.2
Lomakin, I.3
Borukhov, S.4
-
7
-
-
34447540221
-
Identical, independent, and opposing roles of ppGpp and DksA in Escherichia coli
-
Magnusson, L. U., B. Gummesson, P. Jaksimović, A. Farewell, and T. Nyström. 2007. Identical, independent, and opposing roles of ppGpp and DksA in Escherichia coli. J. Bacteriol. 189:5193-5202.
-
(2007)
J. Bacteriol.
, vol.189
, pp. 5193-5202
-
-
Magnusson, L.U.1
Gummesson, B.2
Jaksimović, P.3
Farewell, A.4
Nyström, T.5
-
8
-
-
33748662456
-
DksA is required for growth phase-dependent regulation, growth rate-dependent control, and stringent control of fis expression in Escherichia coli
-
DOI 10.1128/JB.00276-06
-
Mallik, P., B. J. Paul, S. T. Rutherford, R. L. Gourse, and R. Osuna. 2006. DksA is required for growth phase-dependent regulation, growth rate-dependent control, and stringent control of fis expression in Escherichia coli. J. Bacteriol. 188:5775-5782. (Pubitemid 44384085)
-
(2006)
Journal of Bacteriology
, vol.188
, Issue.16
, pp. 5775-5782
-
-
Mallik, P.1
Paul, B.J.2
Rutherford, S.T.3
Gourse, R.L.4
Osuna, R.5
-
10
-
-
0037123602
-
Structural basis of transcription initiation: An RNA polymerase holoenzyme-DNA complex
-
DOI 10.1126/science.1069595
-
Murakami, K. S., S. Masuda, E. A. Campbell, O. Muzzin, and S. A. Darst. 2002. Structural basis of transcription initiation: an RNA polymerase holoenzyme- DNA complex. Science 296:1285-1290. (Pubitemid 34522778)
-
(2002)
Science
, vol.296
, Issue.5571
, pp. 1285-1290
-
-
Murakami, K.S.1
Masuda, S.2
Campbell, E.A.3
Muzzin, O.4
Darst, S.A.5
-
11
-
-
0041669435
-
Control of rRNA expression by small molecules is dynamic and nonredundant
-
Murray, H. D., D. A. Schneider, and R. L. Gourse. 2003. Control of rRNA expression by small molecules is dynamic and nonredundant. Mol. Cell 12:125-134.
-
(2003)
Mol. Cell
, vol.12
, pp. 125-134
-
-
Murray, H.D.1
Schneider, D.A.2
Gourse, R.L.3
-
12
-
-
0043244877
-
Structure and function of the transcription elongation factor GreB bound to bacterial RNA polymerase
-
DOI 10.1016/S0092-8674(03)00600-7
-
Opalka, N., M. Chlenov, P. Chacon, W. J. Rice, W. Wriggers, and S. A. Darst. 2003. Structure and function of the transcription elongation factor GreB bound to bacterial RNA polymerase. Cell 114:335-345. (Pubitemid 36962932)
-
(2003)
Cell
, vol.114
, Issue.3
, pp. 335-345
-
-
Opalka, N.1
Chlenov, M.2
Chacon, P.3
Rice, W.J.4
Wriggers, W.5
Darst, S.A.6
-
13
-
-
4043069926
-
DksA: A critical component of the transcription initiation machinery that potentiates the regulation of rRNA promoters by ppGpp and the initiating NTP
-
Paul, B. J., M. M. Barker, W. Ross, D. A. Schneider, C. Webb, J. W. Foster, and R. L. Gourse. 2004. DksA: a critical component of the transcription initiation machinery that potentiates the regulation of rRNA promoters by ppGpp and the initiating NTP. Cell 118:311-322.
-
(2004)
Cell
, vol.118
, pp. 311-322
-
-
Paul, B.J.1
Barker, M.M.2
Ross, W.3
Schneider, D.A.4
Webb, C.5
Foster, J.W.6
Gourse, R.L.7
-
14
-
-
20344363655
-
DksA potentiates direct activation of amino acid promoters by ppGpp
-
Paul, B. J., M. M. Berkmen, and R. L. Gourse. 2005. DksA potentiates direct activation of amino acid promoters by ppGpp. Proc. Natl. Acad. Sci. USA 102:7823-7828.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 7823-7828
-
-
Paul, B.J.1
Berkmen, M.M.2
Gourse, R.L.3
-
15
-
-
10044234372
-
RRNA transcription in Escherichia coli
-
Paul, B. J., W. Ross, T. Gaal, and R. L. Gourse. 2004. rRNA transcription in Escherichia coli. Annu. Rev. Genet. 38:749-770.
-
(2004)
Annu. Rev. Genet.
, vol.38
, pp. 749-770
-
-
Paul, B.J.1
Ross, W.2
Gaal, T.3
Gourse, R.L.4
-
16
-
-
4043108470
-
Regulation through the secondary channel - Structural framework for ppGpp-DksA synergism during transcription
-
DOI 10.1016/j.cell.2004.06.030, PII S0092867404006270
-
Perederina, A., V. Svetlov, M. N. Vassylyeva, T. H. Tahirov, S. Yokoyama, I. Artsimovitch, and D. G. Vassylyev. 2004. Regulation through the secondary channel-structural framework for ppGpp-DksA synergism during transcription. Cell 118:297-309. (Pubitemid 39061111)
-
(2004)
Cell
, vol.118
, Issue.3
, pp. 297-309
-
-
Perederina, A.1
Svetlov, V.2
Vassylyeva, M.N.3
Tahirov, T.H.4
Yokoyama, S.5
Artsimovitch, I.6
Vassylyev, D.G.7
-
17
-
-
33744962968
-
Antagonistic regulation of Escherichia coli ribosomal RNA rrnB P1 promoter activity by GreA and DksA
-
Potrykus, D., D. Vinella, H. Murphy, A. Szalewska-Palasz, R. D'Ari, and M. Cashel. 2006. Antagonistic regulation of Escherichia coli ribosomal RNA rrnB P1 promoter activity by GreA and DksA. J. Biol. Chem. 281:15238-15248.
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 15238-15248
-
-
Potrykus, D.1
Vinella, D.2
Murphy, H.3
Szalewska-Palasz, A.4
D'Ari, R.5
Cashel, M.6
-
18
-
-
0025163439
-
E. coli Fis protein activates ribosomal RNA transcription in vitro and in vivo
-
Ross, W., J. F. Thompson, J. T. Newlands, and R. L. Gourse. 1990. E. coli Fis protein activates ribosomal RNA transcription in vitro and in vivo. EMBO J. 9:3733-3742. (Pubitemid 20337406)
-
(1990)
EMBO Journal
, vol.9
, Issue.11
, pp. 3733-3742
-
-
Ross, W.1
Thompson, J.F.2
Newlands, J.T.3
Gourse, R.L.4
-
19
-
-
33846604629
-
Effects of DksA, GreA, and GreB on transcription initiation: Insights into the mechanisms of factors that bind in the secondary channel of RNA polymerase
-
Rutherford, S. T., J. J. Lemke, C. E. Vrentas, T. Gaal, W. Ross, and R. L. Gourse. 2007. Effects of DksA, GreA, and GreB on transcription initiation: insights into the mechanisms of factors that bind in the secondary channel of RNA polymerase. J. Mol. Biol. 366:1243-1257.
-
(2007)
J. Mol. Biol.
, vol.366
, pp. 1243-1257
-
-
Rutherford, S.T.1
Lemke, J.J.2
Vrentas, C.E.3
Gaal, T.4
Ross, W.5
Gourse, R.L.6
-
20
-
-
58849139777
-
Allosteric control of Escherichia coli rRNA promoter complexes by DksA
-
Rutherford, S. T., C. L. Villers, J.-H. Lee, W. Ross, and R. L. Gourse. 2009. Allosteric control of Escherichia coli rRNA promoter complexes by DksA. Genes Dev. 23:236-248.
-
(2009)
Genes Dev.
, vol.23
, pp. 236-248
-
-
Rutherford, S.T.1
Villers, C.L.2
Lee, J.-H.3
Ross, W.4
Gourse, R.L.5
-
21
-
-
33749177569
-
Induction of expression of hfq by DksA is essential for Shigella flexneri virulence
-
Sharma, A. K., and S. M. Payne. 2006. Induction of expression of hfq by DksA is essential for Shigella flexneri virulence. Mol. Microbiol. 62:469-479.
-
(2006)
Mol. Microbiol.
, vol.62
, pp. 469-479
-
-
Sharma, A.K.1
Payne, S.M.2
-
22
-
-
9344221087
-
Mapping of catalytic residues in the RNA polymerase active center
-
Zaychikov, E., E. Martin, L. Denissova, M. Kozlov, V. Markovtsov, M. Kashlev, H. Heumann, V. Nikiforov, A. Goldfarb, and A. Mustaev. 1996. Mapping of catalytic residues in the RNA polymerase active center. Science 273:107-109. (Pubitemid 26255436)
-
(1996)
Science
, vol.273
, Issue.5271
, pp. 107-108
-
-
Zaychikov, E.1
Martin, E.2
Denissova, L.3
Kozlov, M.4
Markovtsov, V.5
Kashlev, M.6
Heumann, H.7
Nikiforov, V.8
Goldfarb, A.9
Mustaev, A.10
|